RNA–Protein interactions for RNA: ENSMUST00000106860.5

Trim33-202, Transcript of E3 ubiquitin-protein ligase TRIM33, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim33, Length 5,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33-202ENSMUST00000106860 Krtap13O88375 197 aa11.52□□□□□ -0.57
Trim33-202ENSMUST00000106860 ApcQ61315 2845 aa11.51□□□□□ -0.57
Trim33-202ENSMUST00000106860 Cox6b2Q80ZN9 88 aa11.49□□□□□ -0.57
Trim33-202ENSMUST00000106860 Srrm2Q8BTI8 2703 aaKnown RBP11.48□□□□□ -0.57
Trim33-202ENSMUST00000106860 Nf1Q04690 2841 aa11.47□□□□□ -0.57
Trim33-202ENSMUST00000106860 Krtap14O08640 167 aa11.43□□□□□ -0.58
Trim33-202ENSMUST00000106860 BC029722A0A0N4SW31 51 aa11.42□□□□□ -0.58
Trim33-202ENSMUST00000106860 Pdzd2E9Q1M1 2796 aa11.39□□□□□ -0.59
Trim33-202ENSMUST00000106860 Krtap10-4Q08EG8 221 aa11.39□□□□□ -0.59
Trim33-202ENSMUST00000106860 Gm5767A0A0J9YTU8 78 aa11.36□□□□□ -0.59
Trim33-202ENSMUST00000106860 Dchs1E9PVD3 3291 aa11.36□□□□□ -0.59
Trim33-202ENSMUST00000106860 Gm19426M0QWC7 77 aa11.35□□□□□ -0.59
Trim33-202ENSMUST00000106860 LrbaQ9ESE1 2856 aa11.32□□□□□ -0.6
Trim33-202ENSMUST00000106860 SpegQ62407 3262 aa11.31□□□□□ -0.6
Trim33-202ENSMUST00000106860 Tenm3Q9WTS6 2715 aa11.29□□□□□ -0.6
Trim33-202ENSMUST00000106860 Tnp2P11378 117 aa11.28□□□□□ -0.6
Trim33-202ENSMUST00000106860 Ndufaf8A2AMZ4 74 aa11.26□□□□□ -0.61
Trim33-202ENSMUST00000106860 Sec61bQ9CQS8 96 aaKnown RBP11.23□□□□□ -0.61
Trim33-202ENSMUST00000106860 RelnQ60841 3461 aa11.22□□□□□ -0.61
Trim33-202ENSMUST00000106860 Krtap10-10A0A1W2P7T6 217 aa11.21□□□□□ -0.61
Trim33-202ENSMUST00000106860 Wdfy3Q6VNB8 3508 aa11.16□□□□□ -0.62
Trim33-202ENSMUST00000106860 Helz2E9QAM5 2947 aaKnown RBP11.15□□□□□ -0.63
Trim33-202ENSMUST00000106860 D6Ertd527eA0A0N4SWI3 464 aa11.14□□□□□ -0.63
Trim33-202ENSMUST00000106860 Rps29P62274 56 aa11.08□□□□□ -0.64
Trim33-202ENSMUST00000106860 Myo15aQ9QZZ4 3511 aa11.07□□□□□ -0.64
Trim33-202ENSMUST00000106860 Zfhx3Q61329 3726 aa11.05□□□□□ -0.64
Trim33-202ENSMUST00000106860 Tenm1Q9WTS4 2731 aa11.04□□□□□ -0.64
Trim33-202ENSMUST00000106860 Gm9112A2AI92 75 aa11.01□□□□□ -0.65
Trim33-202ENSMUST00000106860 Gm2696A0A1W2P709 240 aa10.94□□□□□ -0.66
Trim33-202ENSMUST00000106860 Vps13cQ8BX70 3748 aa10.88□□□□□ -0.67
Trim33-202ENSMUST00000106860 Akap9Q70FJ1 3797 aa10.86□□□□□ -0.67
Trim33-202ENSMUST00000106860 Gm40193A0A1B0GT39 78 aa10.85□□□□□ -0.67
Trim33-202ENSMUST00000106860 Muc5acE9QAQ8 3455 aa10.83□□□□□ -0.68
Trim33-202ENSMUST00000106860 DmdP11531 3678 aa10.82□□□□□ -0.68
Trim33-202ENSMUST00000106860 Csmd1Q923L3 3564 aa10.77□□□□□ -0.68
Trim33-202ENSMUST00000106860 Gm21887J3QQ04 176 aa10.71□□□□□ -0.69
Trim33-202ENSMUST00000106860 Tenm2Q9WTS5 2764 aa10.71□□□□□ -0.69
Trim33-202ENSMUST00000106860 OtogO55225 2910 aa10.71□□□□□ -0.7
Trim33-202ENSMUST00000106860 Gm20537G3UYK7 97 aa10.69□□□□□ -0.7
Trim33-202ENSMUST00000106860 SpenQ62504 3644 aaKnown RBP10.61□□□□□ -0.71
Trim33-202ENSMUST00000106860 Tnp1P10856 55 aa10.6□□□□□ -0.71
Trim33-202ENSMUST00000106860 2310079G19RikQ9D6L6 185 aa10.6□□□□□ -0.71
Trim33-202ENSMUST00000106860 A930033H14RikG5E8X6 103 aa10.58□□□□□ -0.72
Trim33-202ENSMUST00000106860 Smg1Q8BKX6 3658 aaKnown RBP10.54□□□□□ -0.72
Trim33-202ENSMUST00000106860 Gm5965D3Z724 196 aa10.48□□□□□ -0.73
Trim33-202ENSMUST00000106860 VwfQ8CIZ8 2813 aa10.39□□□□□ -0.75
Trim33-202ENSMUST00000106860 Col7a1Q63870 2944 aa10.36□□□□□ -0.75
Trim33-202ENSMUST00000106860 Zfhx4Q9JJN2 3550 aa10.35□□□□□ -0.75
Trim33-202ENSMUST00000106860 Megf8P60882 2789 aa10.31□□□□□ -0.76
Trim33-202ENSMUST00000106860 2310057N15RikQ9D6T8 200 aa10.31□□□□□ -0.76
Trim33-202ENSMUST00000106860 Lama5Q61001 3718 aa10.3□□□□□ -0.76
Trim33-202ENSMUST00000106860 B930094E09RikQ8C4T2 136 aa10.3□□□□□ -0.76
Trim33-202ENSMUST00000106860 Prm2P07978 107 aa10.27□□□□□ -0.77
Trim33-202ENSMUST00000106860 Gm884A2A9H6 3643 aa10.13□□□□□ -0.79
Trim33-202ENSMUST00000106860 Fbn1Q61554 2873 aaKnown RBP10.12□□□□□ -0.79
Trim33-202ENSMUST00000106860 Gm17416Q30KP4 66 aa10.05□□□□□ -0.8
Trim33-202ENSMUST00000106860 Cmya5Q70KF4 3739 aa9.94□□□□□ -0.82
Trim33-202ENSMUST00000106860 Svep1A2AVA0 3567 aa9.92□□□□□ -0.82
Trim33-202ENSMUST00000106860 Gm9736A0A1W2P7N1 277 aa9.91□□□□□ -0.82
Trim33-202ENSMUST00000106860 Muc6Q80T03 2850 aa9.91□□□□□ -0.82
Trim33-202ENSMUST00000106860 2210017I01RikA0A0A6YVV1 95 aa9.9□□□□□ -0.82
Trim33-202ENSMUST00000106860 Gm17402F6Z0L5 76 aa9.88□□□□□ -0.83
Trim33-202ENSMUST00000106860 Gm11939A2A592 99 aa9.87□□□□□ -0.83
Trim33-202ENSMUST00000106860 Muc4Q8JZM8 3443 aa9.86□□□□□ -0.83
Trim33-202ENSMUST00000106860 Krtap3-2Q9D638 99 aa9.79□□□□□ -0.84
Trim33-202ENSMUST00000106860 Krtap3-3Q9D7P0 99 aa9.79□□□□□ -0.84
Trim33-202ENSMUST00000106860 Gm9918Q8BUR5 174 aa9.68□□□□□ -0.86
Trim33-202ENSMUST00000106860 Ank2Q8C8R3 3898 aa9.58□□□□□ -0.88
Trim33-202ENSMUST00000106860 Krtap3-1A2A591 98 aa9.43□□□□□ -0.9
Trim33-202ENSMUST00000106860 Csmd2V9GX34 3611 aa9.43□□□□□ -0.9
Trim33-202ENSMUST00000106860 Krtap19-5O08632 62 aa9.42□□□□□ -0.9
Trim33-202ENSMUST00000106860 4933428G20RikQ9D3X4 101 aa9.42□□□□□ -0.9
Trim33-202ENSMUST00000106860 Gm10318A0A1W2P728 225 aa9.39□□□□□ -0.91
Trim33-202ENSMUST00000106860 Krtap13-1Q8K198 168 aa9.38□□□□□ -0.91
Trim33-202ENSMUST00000106860 Gm19668J3QMD1 248 aa9.29□□□□□ -0.92
Trim33-202ENSMUST00000106860 LystP97412 3788 aa9.25□□□□□ -0.93
Trim33-202ENSMUST00000106860 Crct1Q6PAI5 102 aa9.25□□□□□ -0.93
Trim33-202ENSMUST00000106860 Dnah14A0A140LIJ4 4489 aa9.18□□□□□ -0.94
Trim33-202ENSMUST00000106860 CubnQ9JLB4 3623 aa9.13□□□□□ -0.95
Trim33-202ENSMUST00000106860 Dnah10D3YYQ8 4591 aa8.99□□□□□ -0.97
Trim33-202ENSMUST00000106860 Huwe1Q7TMY8 4377 aaKnown RBP8.9□□□□□ -0.98
Trim33-202ENSMUST00000106860 Dnah5Q8VHE6 4621 aa8.85□□□□□ -0.99
Trim33-202ENSMUST00000106860 Krtap7-1Q9D3I6 87 aa8.83□□□□□ -1
Trim33-202ENSMUST00000106860 Dnah17Q69Z23 4481 aa8.77□□□□□ -1.01
Trim33-202ENSMUST00000106860 Csmd3Q80T79 3707 aa8.74□□□□□ -1.01
Trim33-202ENSMUST00000106860 Sprr2a3Q4KL71 83 aa8.72□□□□□ -1.01
Trim33-202ENSMUST00000106860 Sprr2a1Q9CQK8 83 aa8.72□□□□□ -1.01
Trim33-202ENSMUST00000106860 Xirp2Q4U4S6 3784 aa8.71□□□□□ -1.01
Trim33-202ENSMUST00000106860 Hspg2Q05793 3707 aaKnown RBP8.7□□□□□ -1.02
Trim33-202ENSMUST00000106860 Krtap1-5A2A590 122 aa8.69□□□□□ -1.02
Trim33-202ENSMUST00000106860 Stard9Q80TF6 4561 aa8.69□□□□□ -1.02
Trim33-202ENSMUST00000106860 Vps13dB1ART2 4390 aa8.67□□□□□ -1.02
Trim33-202ENSMUST00000106860 PlecQ9QXS1 4691 aaKnown RBP8.61□□□□□ -1.03
Trim33-202ENSMUST00000106860 BsnO88737 3942 aa8.6□□□□□ -1.03
Trim33-202ENSMUST00000106860 Dnah11E9Q7N9 4488 aa8.52□□□□□ -1.05
Trim33-202ENSMUST00000106860 Gm19402J3QJV4 266 aa8.47□□□□□ -1.05
Trim33-202ENSMUST00000106860 Dnah9B1AR51 4484 aa8.41□□□□□ -1.06
Trim33-202ENSMUST00000106860 Ryr1E9PZQ0 5035 aa8.4□□□□□ -1.07
Trim33-202ENSMUST00000106860 Dnah7bL7N1Y0 4068 aa8.38□□□□□ -1.07
Trim33-202ENSMUST00000106860 Gm18596A0A1W2P860 280 aa8.37□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms