RNA–Protein interactions for RNA: ENSMUST00000094951.9

Scn1a-202, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn1a, Length 5,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-202ENSMUST00000094951 FrylF8VQ05 3007 aa3.64□□□□□ -1.83
Scn1a-202ENSMUST00000094951 Srrm2Q8BTI8 2703 aaKnown RBP3.63□□□□□ -1.83
Scn1a-202ENSMUST00000094951 FryE9Q8I9 3020 aa3.63□□□□□ -1.83
Scn1a-202ENSMUST00000094951 KalrnA2CG49 2964 aa3.63□□□□□ -1.83
Scn1a-202ENSMUST00000094951 Myo15aQ9QZZ4 3511 aa3.62□□□□□ -1.83
Scn1a-202ENSMUST00000094951 Dmxl1Q6PNC0 3013 aa3.61□□□□□ -1.83
Scn1a-202ENSMUST00000094951 Wdfy3Q6VNB8 3508 aa3.61□□□□□ -1.83
Scn1a-202ENSMUST00000094951 Lrrc37aB1AWG4 3215 aa3.61□□□□□ -1.83
Scn1a-202ENSMUST00000094951 Lama1P19137 3084 aa3.6□□□□□ -1.83
Scn1a-202ENSMUST00000094951 Gm20537G3UYK7 97 aa3.6□□□□□ -1.83
Scn1a-202ENSMUST00000094951 VcanQ62059 3357 aa3.59□□□□□ -1.83
Scn1a-202ENSMUST00000094951 Zfhx3Q61329 3726 aa3.59□□□□□ -1.83
Scn1a-202ENSMUST00000094951 Dchs2A0A0A6YW72 3346 aa3.59□□□□□ -1.84
Scn1a-202ENSMUST00000094951 Megf8P60882 2789 aa3.58□□□□□ -1.84
Scn1a-202ENSMUST00000094951 BptfA2A654 3036 aaKnown RBP3.58□□□□□ -1.84
Scn1a-202ENSMUST00000094951 Ndufaf8A2AMZ4 74 aa3.58□□□□□ -1.84
Scn1a-202ENSMUST00000094951 TgO08710 2766 aa3.57□□□□□ -1.84
Scn1a-202ENSMUST00000094951 Ash1lQ99MY8 2958 aa3.56□□□□□ -1.84
Scn1a-202ENSMUST00000094951 AspmQ8CJ27 3122 aa3.55□□□□□ -1.84
Scn1a-202ENSMUST00000094951 Pdzd2E9Q1M1 2796 aa3.55□□□□□ -1.84
Scn1a-202ENSMUST00000094951 Celsr1O35161 3034 aa3.54□□□□□ -1.84
Scn1a-202ENSMUST00000094951 B930094E09RikQ8C4T2 136 aa3.54□□□□□ -1.84
Scn1a-202ENSMUST00000094951 Dchs1E9PVD3 3291 aa3.54□□□□□ -1.84
Scn1a-202ENSMUST00000094951 Nf1Q04690 2841 aa3.54□□□□□ -1.84
Scn1a-202ENSMUST00000094951 SpegQ62407 3262 aa3.54□□□□□ -1.84
Scn1a-202ENSMUST00000094951 DmdP11531 3678 aa3.53□□□□□ -1.84
Scn1a-202ENSMUST00000094951 Tex15F8VPN2 2785 aa3.53□□□□□ -1.84
Scn1a-202ENSMUST00000094951 Utp20Q5XG71 2788 aaKnown RBP3.53□□□□□ -1.84
Scn1a-202ENSMUST00000094951 Krtap19-5O08632 62 aa3.52□□□□□ -1.85
Scn1a-202ENSMUST00000094951 Zzef1Q5SSH7 2924 aa3.51□□□□□ -1.85
Scn1a-202ENSMUST00000094951 2310079G19RikQ9D6L6 185 aa3.5□□□□□ -1.85
Scn1a-202ENSMUST00000094951 Gm9112A2AI92 75 aa3.48□□□□□ -1.85
Scn1a-202ENSMUST00000094951 DspE9Q557 2883 aaKnown RBP3.48□□□□□ -1.85
Scn1a-202ENSMUST00000094951 Dmxl2Q8BPN8 3032 aa3.46□□□□□ -1.86
Scn1a-202ENSMUST00000094951 Tenm1Q9WTS4 2731 aa3.45□□□□□ -1.86
Scn1a-202ENSMUST00000094951 Krtap4-1Q3UUY3 169 aa3.45□□□□□ -1.86
Scn1a-202ENSMUST00000094951 Tenm2Q9WTS5 2764 aa3.45□□□□□ -1.86
Scn1a-202ENSMUST00000094951 RelnQ60841 3461 aa3.44□□□□□ -1.86
Scn1a-202ENSMUST00000094951 Wdfy4E9Q2M9 3149 aa3.44□□□□□ -1.86
Scn1a-202ENSMUST00000094951 Gm9736A0A1W2P7N1 277 aa3.43□□□□□ -1.86
Scn1a-202ENSMUST00000094951 Csmd1Q923L3 3564 aa3.43□□□□□ -1.86
Scn1a-202ENSMUST00000094951 Tenm3Q9WTS6 2715 aa3.42□□□□□ -1.86
Scn1a-202ENSMUST00000094951 ApcQ61315 2845 aa3.42□□□□□ -1.86
Scn1a-202ENSMUST00000094951 4933428G20RikQ9D3X4 101 aa3.41□□□□□ -1.86
Scn1a-202ENSMUST00000094951 SpenQ62504 3644 aaKnown RBP3.41□□□□□ -1.86
Scn1a-202ENSMUST00000094951 Vps13cQ8BX70 3748 aa3.41□□□□□ -1.86
Scn1a-202ENSMUST00000094951 Akap9Q70FJ1 3797 aa3.41□□□□□ -1.86
Scn1a-202ENSMUST00000094951 NbeaQ9EPN1 2936 aa3.4□□□□□ -1.86
Scn1a-202ENSMUST00000094951 Gm19668J3QMD1 248 aa3.4□□□□□ -1.87
Scn1a-202ENSMUST00000094951 Krtap3-2Q9D638 99 aa3.4□□□□□ -1.87
Scn1a-202ENSMUST00000094951 Krtap3-3Q9D7P0 99 aa3.4□□□□□ -1.87
Scn1a-202ENSMUST00000094951 Adgrg4B7ZCC9 3073 aa3.38□□□□□ -1.87
Scn1a-202ENSMUST00000094951 Zfhx4Q9JJN2 3550 aa3.38□□□□□ -1.87
Scn1a-202ENSMUST00000094951 Trank1Q8BV79 2999 aa3.36□□□□□ -1.87
Scn1a-202ENSMUST00000094951 LrbaQ9ESE1 2856 aa3.33□□□□□ -1.88
Scn1a-202ENSMUST00000094951 Smg1Q8BKX6 3658 aaKnown RBP3.33□□□□□ -1.88
Scn1a-202ENSMUST00000094951 Gm884A2A9H6 3643 aa3.33□□□□□ -1.88
Scn1a-202ENSMUST00000094951 Gm9918Q8BUR5 174 aa3.32□□□□□ -1.88
Scn1a-202ENSMUST00000094951 Krtap13-1Q8K198 168 aa3.32□□□□□ -1.88
Scn1a-202ENSMUST00000094951 Gm18596A0A1W2P860 280 aa3.32□□□□□ -1.88
Scn1a-202ENSMUST00000094951 Muc5acE9QAQ8 3455 aa3.3□□□□□ -1.88
Scn1a-202ENSMUST00000094951 Krtap8-1O08633 61 aa3.25□□□□□ -1.89
Scn1a-202ENSMUST00000094951 Sprr2kO70562 68 aa3.25□□□□□ -1.89
Scn1a-202ENSMUST00000094951 Lama5Q61001 3718 aa3.24□□□□□ -1.89
Scn1a-202ENSMUST00000094951 Chd9Q8BYH8 2885 aa3.24□□□□□ -1.89
Scn1a-202ENSMUST00000094951 Celsr2Q9R0M0 2920 aa3.22□□□□□ -1.89
Scn1a-202ENSMUST00000094951 Gm11563B1AQ90 168 aa3.21□□□□□ -1.89
Scn1a-202ENSMUST00000094951 Krtap4-7Q9D732 168 aa3.21□□□□□ -1.89
Scn1a-202ENSMUST00000094951 Svep1A2AVA0 3567 aa3.2□□□□□ -1.9
Scn1a-202ENSMUST00000094951 Huwe1Q7TMY8 4377 aaKnown RBP3.19□□□□□ -1.9
Scn1a-202ENSMUST00000094951 Cmya5Q70KF4 3739 aa3.18□□□□□ -1.9
Scn1a-202ENSMUST00000094951 Sprr2gO70558 76 aa3.17□□□□□ -1.9
Scn1a-202ENSMUST00000094951 Crct1Q6PAI5 102 aa3.17□□□□□ -1.9
Scn1a-202ENSMUST00000094951 Krtap19-9aF8WH65 55 aa3.16□□□□□ -1.9
Scn1a-202ENSMUST00000094951 Krtap1-5A2A590 122 aa3.16□□□□□ -1.9
Scn1a-202ENSMUST00000094951 Krtap3-1A2A591 98 aa3.16□□□□□ -1.9
Scn1a-202ENSMUST00000094951 Helz2E9QAM5 2947 aaKnown RBP3.15□□□□□ -1.91
Scn1a-202ENSMUST00000094951 Lce1mQ9CR91 182 aa3.14□□□□□ -1.91
Scn1a-202ENSMUST00000094951 Prm1P02319 51 aa3.13□□□□□ -1.91
Scn1a-202ENSMUST00000094951 Muc4Q8JZM8 3443 aa3.11□□□□□ -1.91
Scn1a-202ENSMUST00000094951 Gm19402J3QJV4 266 aa3.1□□□□□ -1.91
Scn1a-202ENSMUST00000094951 OtogO55225 2910 aa3.09□□□□□ -1.92
Scn1a-202ENSMUST00000094951 Gm11555B1AQ89 175 aa3.09□□□□□ -1.92
Scn1a-202ENSMUST00000094951 Csmd2V9GX34 3611 aa3.08□□□□□ -1.92
Scn1a-202ENSMUST00000094951 Gm10318A0A1W2P728 225 aa3.08□□□□□ -1.92
Scn1a-202ENSMUST00000094951 VwfQ8CIZ8 2813 aa3.04□□□□□ -1.92
Scn1a-202ENSMUST00000094951 Krtap1-4Q3V2D6 188 aa3.04□□□□□ -1.92
Scn1a-202ENSMUST00000094951 LorP18165 486 aa3.02□□□□□ -1.93
Scn1a-202ENSMUST00000094951 Krtap19-9bQ99NG9 58 aa3.02□□□□□ -1.93
Scn1a-202ENSMUST00000094951 Gm6358A0A087WPH4 74 aa3.01□□□□□ -1.93
Scn1a-202ENSMUST00000094951 Fbn1Q61554 2873 aaKnown RBP3.01□□□□□ -1.93
Scn1a-202ENSMUST00000094951 Sprr2a3Q4KL71 83 aa3□□□□□ -1.93
Scn1a-202ENSMUST00000094951 Sprr2a1Q9CQK8 83 aa3□□□□□ -1.93
Scn1a-202ENSMUST00000094951 Krtap4-2B1AQ85 167 aa2.99□□□□□ -1.93
Scn1a-202ENSMUST00000094951 Krtap12-1Q9Z287 130 aa2.98□□□□□ -1.93
Scn1a-202ENSMUST00000094951 Ank2Q8C8R3 3898 aa2.97□□□□□ -1.93
Scn1a-202ENSMUST00000094951 Col7a1Q63870 2944 aa2.94□□□□□ -1.94
Scn1a-202ENSMUST00000094951 Stard9Q80TF6 4561 aa2.94□□□□□ -1.94
Scn1a-202ENSMUST00000094951 Krtap7-1Q9D3I6 87 aa2.94□□□□□ -1.94
Scn1a-202ENSMUST00000094951 CubnQ9JLB4 3623 aa2.92□□□□□ -1.94
Retrieved 100 of 22,080 RNA–protein pairs in 281.7 ms