RNA–Protein interactions for RNA: ENSMUST00000055296.10

Polr1a-201, Transcript of DNA-directed RNA polymerase I subunit RPA1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Polr1a, Length 9,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1a-201ENSMUST00000055296 Vps13aQ5H8C4 3166 aa4.79□□□□□ -1.64
Polr1a-201ENSMUST00000055296 FryE9Q8I9 3020 aa4.78□□□□□ -1.64
Polr1a-201ENSMUST00000055296 DspE9Q557 2883 aaKnown RBP4.77□□□□□ -1.65
Polr1a-201ENSMUST00000055296 Celsr3Q91ZI0 3301 aa4.76□□□□□ -1.65
Polr1a-201ENSMUST00000055296 Unc80Q8BLN6 3261 aa4.76□□□□□ -1.65
Polr1a-201ENSMUST00000055296 Wdfy4E9Q2M9 3149 aa4.75□□□□□ -1.65
Polr1a-201ENSMUST00000055296 FrylF8VQ05 3007 aa4.75□□□□□ -1.65
Polr1a-201ENSMUST00000055296 Pdzd2E9Q1M1 2796 aa4.73□□□□□ -1.65
Polr1a-201ENSMUST00000055296 Tenm1Q9WTS4 2731 aa4.72□□□□□ -1.65
Polr1a-201ENSMUST00000055296 Nf1Q04690 2841 aa4.72□□□□□ -1.65
Polr1a-201ENSMUST00000055296 Gm9918Q8BUR5 174 aa4.72□□□□□ -1.65
Polr1a-201ENSMUST00000055296 AspmQ8CJ27 3122 aa4.72□□□□□ -1.65
Polr1a-201ENSMUST00000055296 Prm2P07978 107 aa4.71□□□□□ -1.65
Polr1a-201ENSMUST00000055296 Celsr1O35161 3034 aa4.71□□□□□ -1.66
Polr1a-201ENSMUST00000055296 4933428G20RikQ9D3X4 101 aa4.7□□□□□ -1.66
Polr1a-201ENSMUST00000055296 Dmxl2Q8BPN8 3032 aa4.7□□□□□ -1.66
Polr1a-201ENSMUST00000055296 Lama1P19137 3084 aa4.69□□□□□ -1.66
Polr1a-201ENSMUST00000055296 Tenm4Q3UHK6 2771 aa4.69□□□□□ -1.66
Polr1a-201ENSMUST00000055296 B930094E09RikQ8C4T2 136 aa4.67□□□□□ -1.66
Polr1a-201ENSMUST00000055296 Gm2696A0A1W2P709 240 aa4.67□□□□□ -1.66
Polr1a-201ENSMUST00000055296 Akap9Q70FJ1 3797 aa4.67□□□□□ -1.66
Polr1a-201ENSMUST00000055296 Chd9Q8BYH8 2885 aa4.66□□□□□ -1.66
Polr1a-201ENSMUST00000055296 Lrrc37aB1AWG4 3215 aa4.66□□□□□ -1.66
Polr1a-201ENSMUST00000055296 Gm20537G3UYK7 97 aa4.66□□□□□ -1.66
Polr1a-201ENSMUST00000055296 Col6a3E9PWQ3 3284 aa4.65□□□□□ -1.67
Polr1a-201ENSMUST00000055296 Ank2Q8C8R3 3898 aa4.64□□□□□ -1.67
Polr1a-201ENSMUST00000055296 Adgrg4B7ZCC9 3073 aa4.64□□□□□ -1.67
Polr1a-201ENSMUST00000055296 DmdP11531 3678 aa4.64□□□□□ -1.67
Polr1a-201ENSMUST00000055296 LrbaQ9ESE1 2856 aa4.64□□□□□ -1.67
Polr1a-201ENSMUST00000055296 Frem2Q6NVD0 3160 aa4.63□□□□□ -1.67
Polr1a-201ENSMUST00000055296 Myo15aQ9QZZ4 3511 aa4.62□□□□□ -1.67
Polr1a-201ENSMUST00000055296 Wdfy3Q6VNB8 3508 aa4.62□□□□□ -1.67
Polr1a-201ENSMUST00000055296 Trank1Q8BV79 2999 aa4.62□□□□□ -1.67
Polr1a-201ENSMUST00000055296 Brca2P97929 3329 aa4.61□□□□□ -1.67
Polr1a-201ENSMUST00000055296 2310061N02RikQ9D6S9 174 aa4.59□□□□□ -1.67
Polr1a-201ENSMUST00000055296 A930033H14RikG5E8X6 103 aa4.59□□□□□ -1.67
Polr1a-201ENSMUST00000055296 Tenm3Q9WTS6 2715 aa4.57□□□□□ -1.68
Polr1a-201ENSMUST00000055296 VcanQ62059 3357 aa4.55□□□□□ -1.68
Polr1a-201ENSMUST00000055296 Megf8P60882 2789 aa4.54□□□□□ -1.68
Polr1a-201ENSMUST00000055296 SpegQ62407 3262 aa4.53□□□□□ -1.68
Polr1a-201ENSMUST00000055296 Dchs2A0A0A6YW72 3346 aa4.51□□□□□ -1.69
Polr1a-201ENSMUST00000055296 Smg1Q8BKX6 3658 aaKnown RBP4.51□□□□□ -1.69
Polr1a-201ENSMUST00000055296 Celsr2Q9R0M0 2920 aa4.5□□□□□ -1.69
Polr1a-201ENSMUST00000055296 Gm17402F6Z0L5 76 aa4.49□□□□□ -1.69
Polr1a-201ENSMUST00000055296 Dchs1E9PVD3 3291 aa4.49□□□□□ -1.69
Polr1a-201ENSMUST00000055296 Gm17416Q30KP4 66 aa4.49□□□□□ -1.69
Polr1a-201ENSMUST00000055296 SpenQ62504 3644 aaKnown RBP4.47□□□□□ -1.69
Polr1a-201ENSMUST00000055296 Lama5Q61001 3718 aa4.46□□□□□ -1.7
Polr1a-201ENSMUST00000055296 Gm884A2A9H6 3643 aa4.4□□□□□ -1.71
Polr1a-201ENSMUST00000055296 2310079G19RikQ9D6L6 185 aa4.37□□□□□ -1.71
Polr1a-201ENSMUST00000055296 Zfhx4Q9JJN2 3550 aa4.36□□□□□ -1.71
Polr1a-201ENSMUST00000055296 OtogO55225 2910 aa4.35□□□□□ -1.71
Polr1a-201ENSMUST00000055296 RelnQ60841 3461 aa4.34□□□□□ -1.71
Polr1a-201ENSMUST00000055296 Cmya5Q70KF4 3739 aa4.33□□□□□ -1.72
Polr1a-201ENSMUST00000055296 Gm19668J3QMD1 248 aa4.33□□□□□ -1.72
Polr1a-201ENSMUST00000055296 VwfQ8CIZ8 2813 aa4.3□□□□□ -1.72
Polr1a-201ENSMUST00000055296 Gm10318A0A1W2P728 225 aa4.28□□□□□ -1.72
Polr1a-201ENSMUST00000055296 Gm9736A0A1W2P7N1 277 aa4.27□□□□□ -1.73
Polr1a-201ENSMUST00000055296 Muc5acE9QAQ8 3455 aa4.25□□□□□ -1.73
Polr1a-201ENSMUST00000055296 Gm6358A0A087WPH4 74 aa4.25□□□□□ -1.73
Polr1a-201ENSMUST00000055296 Tenm2Q9WTS5 2764 aa4.24□□□□□ -1.73
Polr1a-201ENSMUST00000055296 Csmd1Q923L3 3564 aa4.24□□□□□ -1.73
Polr1a-201ENSMUST00000055296 Csmd2V9GX34 3611 aa4.22□□□□□ -1.73
Polr1a-201ENSMUST00000055296 Helz2E9QAM5 2947 aaKnown RBP4.21□□□□□ -1.74
Polr1a-201ENSMUST00000055296 2210017I01RikA0A0A6YVV1 95 aa4.2□□□□□ -1.74
Polr1a-201ENSMUST00000055296 Crct1Q6PAI5 102 aa4.14□□□□□ -1.75
Polr1a-201ENSMUST00000055296 Col7a1Q63870 2944 aa4.12□□□□□ -1.75
Polr1a-201ENSMUST00000055296 Gm18596A0A1W2P860 280 aa4.12□□□□□ -1.75
Polr1a-201ENSMUST00000055296 LystP97412 3788 aa4.1□□□□□ -1.75
Polr1a-201ENSMUST00000055296 BsnO88737 3942 aa4.09□□□□□ -1.75
Polr1a-201ENSMUST00000055296 Gm19402J3QJV4 266 aa4.05□□□□□ -1.76
Polr1a-201ENSMUST00000055296 Sprr2kO70562 68 aa4.04□□□□□ -1.76
Polr1a-201ENSMUST00000055296 Xirp2Q4U4S6 3784 aa4.01□□□□□ -1.77
Polr1a-201ENSMUST00000055296 Svep1A2AVA0 3567 aa3.99□□□□□ -1.77
Polr1a-201ENSMUST00000055296 Krtap13-1Q8K198 168 aa3.98□□□□□ -1.77
Polr1a-201ENSMUST00000055296 Fbn1Q61554 2873 aaKnown RBP3.98□□□□□ -1.77
Polr1a-201ENSMUST00000055296 Muc6Q80T03 2850 aa3.94□□□□□ -1.78
Polr1a-201ENSMUST00000055296 Krtap19-5O08632 62 aa3.9□□□□□ -1.78
Polr1a-201ENSMUST00000055296 Krtap8-1O08633 61 aa3.9□□□□□ -1.78
Polr1a-201ENSMUST00000055296 Krtap7-1Q9D3I6 87 aa3.89□□□□□ -1.79
Polr1a-201ENSMUST00000055296 Sprr2gO70558 76 aa3.86□□□□□ -1.79
Polr1a-201ENSMUST00000055296 Muc4Q8JZM8 3443 aa3.85□□□□□ -1.79
Polr1a-201ENSMUST00000055296 Gm11939A2A592 99 aa3.84□□□□□ -1.8
Polr1a-201ENSMUST00000055296 Dnah3Q8BW94 4083 aa3.83□□□□□ -1.8
Polr1a-201ENSMUST00000055296 TnxbO35452 4006 aa3.8□□□□□ -1.8
Polr1a-201ENSMUST00000055296 Hspg2Q05793 3707 aaKnown RBP3.8□□□□□ -1.8
Polr1a-201ENSMUST00000055296 CubnQ9JLB4 3623 aa3.8□□□□□ -1.8
Polr1a-201ENSMUST00000055296 Dnah7bL7N1Y0 4068 aa3.79□□□□□ -1.8
Polr1a-201ENSMUST00000055296 Krtap3-1A2A591 98 aa3.76□□□□□ -1.81
Polr1a-201ENSMUST00000055296 Huwe1Q7TMY8 4377 aaKnown RBP3.75□□□□□ -1.81
Polr1a-201ENSMUST00000055296 Krtap3-2Q9D638 99 aa3.73□□□□□ -1.81
Polr1a-201ENSMUST00000055296 Krtap3-3Q9D7P0 99 aa3.73□□□□□ -1.81
Polr1a-201ENSMUST00000055296 Kmt2aP55200 3966 aa3.72□□□□□ -1.81
Polr1a-201ENSMUST00000055296 PrkdcP97313 4128 aa3.71□□□□□ -1.82
Polr1a-201ENSMUST00000055296 Csmd3Q80T79 3707 aa3.71□□□□□ -1.82
Polr1a-201ENSMUST00000055296 Krtap19-9aF8WH65 55 aa3.7□□□□□ -1.82
Polr1a-201ENSMUST00000055296 Dnah7cA0A087WR13 4024 aa3.69□□□□□ -1.82
Polr1a-201ENSMUST00000055296 Dnah6E9Q0B6 4144 aa3.65□□□□□ -1.83
Polr1a-201ENSMUST00000055296 Dnah7aE9Q0T8 4024 aa3.63□□□□□ -1.83
Polr1a-201ENSMUST00000055296 Krtap19-9bQ99NG9 58 aa3.62□□□□□ -1.83
Retrieved 100 of 22,080 RNA–protein pairs in 109.1 ms