RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 SpenQ62504 3644 aaKnown RBP4.13□□□□□ -1.75
Smc1a-201ENSMUST00000045312 Krtap14O08640 167 aa4.12□□□□□ -1.75
Smc1a-201ENSMUST00000045312 Helz2E9QAM5 2947 aaKnown RBP4.11□□□□□ -1.75
Smc1a-201ENSMUST00000045312 Dchs1E9PVD3 3291 aa4.11□□□□□ -1.75
Smc1a-201ENSMUST00000045312 Spink7Q6IE32 76 aa4.09□□□□□ -1.75
Smc1a-201ENSMUST00000045312 Krtap10-10A0A1W2P7T6 217 aa4.08□□□□□ -1.76
Smc1a-201ENSMUST00000045312 Krtap13O88375 197 aa4.08□□□□□ -1.76
Smc1a-201ENSMUST00000045312 LrbaQ9ESE1 2856 aa4.08□□□□□ -1.76
Smc1a-201ENSMUST00000045312 Fam229aB2KGE5 128 aa4.07□□□□□ -1.76
Smc1a-201ENSMUST00000045312 SpegQ62407 3262 aa4.07□□□□□ -1.76
Smc1a-201ENSMUST00000045312 Tenm4Q3UHK6 2771 aa4.07□□□□□ -1.76
Smc1a-201ENSMUST00000045312 Gm9112A2AI92 75 aa4.06□□□□□ -1.76
Smc1a-201ENSMUST00000045312 Nf1Q04690 2841 aa4.05□□□□□ -1.76
Smc1a-201ENSMUST00000045312 Gm11939A2A592 99 aa4.05□□□□□ -1.76
Smc1a-201ENSMUST00000045312 2310050C09RikG5E8Z3 280 aa4.05□□□□□ -1.76
Smc1a-201ENSMUST00000045312 Krtap29-1A2A5X4 342 aa4.04□□□□□ -1.76
Smc1a-201ENSMUST00000045312 Cox6b2Q80ZN9 88 aa4.04□□□□□ -1.76
Smc1a-201ENSMUST00000045312 Krtap15-1Q9QZU5 150 aa4.03□□□□□ -1.76
Smc1a-201ENSMUST00000045312 FcgbpE9Q0B5 2583 aa4.03□□□□□ -1.76
Smc1a-201ENSMUST00000045312 2310061N02RikQ9D6S9 174 aa4.03□□□□□ -1.76
Smc1a-201ENSMUST00000045312 Tenm3Q9WTS6 2715 aa4.03□□□□□ -1.76
Smc1a-201ENSMUST00000045312 Gm19426M0QWC7 77 aa4.01□□□□□ -1.77
Smc1a-201ENSMUST00000045312 Prm2P07978 107 aa4.01□□□□□ -1.77
Smc1a-201ENSMUST00000045312 D6Ertd527eA0A0N4SWI3 464 aa4.01□□□□□ -1.77
Smc1a-201ENSMUST00000045312 Pdzd2E9Q1M1 2796 aa4.01□□□□□ -1.77
Smc1a-201ENSMUST00000045312 Camk2n1Q6QWF9 78 aa4□□□□□ -1.77
Smc1a-201ENSMUST00000045312 Zfhx4Q9JJN2 3550 aa3.99□□□□□ -1.77
Smc1a-201ENSMUST00000045312 Gm9507D3Z5T3 223 aa3.95□□□□□ -1.78
Smc1a-201ENSMUST00000045312 Gm20537G3UYK7 97 aa3.95□□□□□ -1.78
Smc1a-201ENSMUST00000045312 Vps13cQ8BX70 3748 aa3.94□□□□□ -1.78
Smc1a-201ENSMUST00000045312 BC029722A0A0N4SW31 51 aa3.94□□□□□ -1.78
Smc1a-201ENSMUST00000045312 Gm5767A0A0J9YTU8 78 aa3.92□□□□□ -1.78
Smc1a-201ENSMUST00000045312 Csmd1Q923L3 3564 aa3.9□□□□□ -1.78
Smc1a-201ENSMUST00000045312 RelnQ60841 3461 aa3.9□□□□□ -1.78
Smc1a-201ENSMUST00000045312 Tnp2P11378 117 aa3.9□□□□□ -1.79
Smc1a-201ENSMUST00000045312 Csmd2V9GX34 3611 aa3.88□□□□□ -1.79
Smc1a-201ENSMUST00000045312 Sec61bQ9CQS8 96 aaKnown RBP3.88□□□□□ -1.79
Smc1a-201ENSMUST00000045312 Rps29P62274 56 aa3.87□□□□□ -1.79
Smc1a-201ENSMUST00000045312 Krtap10-4Q08EG8 221 aa3.86□□□□□ -1.79
Smc1a-201ENSMUST00000045312 Gm5965D3Z724 196 aa3.82□□□□□ -1.8
Smc1a-201ENSMUST00000045312 Tenm1Q9WTS4 2731 aa3.82□□□□□ -1.8
Smc1a-201ENSMUST00000045312 Cmya5Q70KF4 3739 aa3.82□□□□□ -1.8
Smc1a-201ENSMUST00000045312 Megf8P60882 2789 aa3.81□□□□□ -1.8
Smc1a-201ENSMUST00000045312 2310079G19RikQ9D6L6 185 aa3.8□□□□□ -1.8
Smc1a-201ENSMUST00000045312 Smg1Q8BKX6 3658 aaKnown RBP3.79□□□□□ -1.8
Smc1a-201ENSMUST00000045312 Muc4Q8JZM8 3443 aa3.79□□□□□ -1.8
Smc1a-201ENSMUST00000045312 Lama5Q61001 3718 aa3.79□□□□□ -1.8
Smc1a-201ENSMUST00000045312 Gm40193A0A1B0GT39 78 aa3.78□□□□□ -1.8
Smc1a-201ENSMUST00000045312 OtogO55225 2910 aa3.76□□□□□ -1.81
Smc1a-201ENSMUST00000045312 Gm21887J3QQ04 176 aa3.75□□□□□ -1.81
Smc1a-201ENSMUST00000045312 2310057N15RikQ9D6T8 200 aa3.75□□□□□ -1.81
Smc1a-201ENSMUST00000045312 Gm2696A0A1W2P709 240 aa3.73□□□□□ -1.81
Smc1a-201ENSMUST00000045312 A930033H14RikG5E8X6 103 aa3.73□□□□□ -1.81
Smc1a-201ENSMUST00000045312 Svep1A2AVA0 3567 aa3.71□□□□□ -1.81
Smc1a-201ENSMUST00000045312 B930094E09RikQ8C4T2 136 aa3.69□□□□□ -1.82
Smc1a-201ENSMUST00000045312 Tnp1P10856 55 aa3.66□□□□□ -1.82
Smc1a-201ENSMUST00000045312 Tenm2Q9WTS5 2764 aa3.66□□□□□ -1.82
Smc1a-201ENSMUST00000045312 Fbn1Q61554 2873 aaKnown RBP3.65□□□□□ -1.83
Smc1a-201ENSMUST00000045312 VwfQ8CIZ8 2813 aa3.63□□□□□ -1.83
Smc1a-201ENSMUST00000045312 LystP97412 3788 aa3.61□□□□□ -1.83
Smc1a-201ENSMUST00000045312 Col7a1Q63870 2944 aa3.53□□□□□ -1.84
Smc1a-201ENSMUST00000045312 Hspg2Q05793 3707 aaKnown RBP3.52□□□□□ -1.85
Smc1a-201ENSMUST00000045312 Ank2Q8C8R3 3898 aa3.5□□□□□ -1.85
Smc1a-201ENSMUST00000045312 Muc6Q80T03 2850 aa3.47□□□□□ -1.85
Smc1a-201ENSMUST00000045312 Gm17416Q30KP4 66 aa3.46□□□□□ -1.86
Smc1a-201ENSMUST00000045312 Gm9918Q8BUR5 174 aa3.46□□□□□ -1.86
Smc1a-201ENSMUST00000045312 CubnQ9JLB4 3623 aa3.46□□□□□ -1.86
Smc1a-201ENSMUST00000045312 2210017I01RikA0A0A6YVV1 95 aa3.44□□□□□ -1.86
Smc1a-201ENSMUST00000045312 Krtap3-2Q9D638 99 aa3.44□□□□□ -1.86
Smc1a-201ENSMUST00000045312 Krtap3-3Q9D7P0 99 aa3.44□□□□□ -1.86
Smc1a-201ENSMUST00000045312 Gm17402F6Z0L5 76 aa3.41□□□□□ -1.86
Smc1a-201ENSMUST00000045312 BsnO88737 3942 aa3.41□□□□□ -1.86
Smc1a-201ENSMUST00000045312 Xirp2Q4U4S6 3784 aa3.41□□□□□ -1.86
Smc1a-201ENSMUST00000045312 Gm9736A0A1W2P7N1 277 aa3.39□□□□□ -1.87
Smc1a-201ENSMUST00000045312 Krtap19-5O08632 62 aa3.36□□□□□ -1.87
Smc1a-201ENSMUST00000045312 Krtap13-1Q8K198 168 aa3.33□□□□□ -1.88
Smc1a-201ENSMUST00000045312 Krtap3-1A2A591 98 aa3.32□□□□□ -1.88
Smc1a-201ENSMUST00000045312 TnxbO35452 4006 aa3.31□□□□□ -1.88
Smc1a-201ENSMUST00000045312 Csmd3Q80T79 3707 aa3.31□□□□□ -1.88
Smc1a-201ENSMUST00000045312 Krtap7-1Q9D3I6 87 aa3.3□□□□□ -1.88
Smc1a-201ENSMUST00000045312 Dnah14A0A140LIJ4 4489 aa3.27□□□□□ -1.89
Smc1a-201ENSMUST00000045312 Gm19668J3QMD1 248 aa3.26□□□□□ -1.89
Smc1a-201ENSMUST00000045312 Gm10318A0A1W2P728 225 aa3.25□□□□□ -1.89
Smc1a-201ENSMUST00000045312 4933428G20RikQ9D3X4 101 aa3.22□□□□□ -1.89
Smc1a-201ENSMUST00000045312 Huwe1Q7TMY8 4377 aaKnown RBP3.19□□□□□ -1.9
Smc1a-201ENSMUST00000045312 Kmt2aP55200 3966 aa3.18□□□□□ -1.9
Smc1a-201ENSMUST00000045312 Dnah17Q69Z23 4481 aa3.14□□□□□ -1.91
Smc1a-201ENSMUST00000045312 Vps13dB1ART2 4390 aa3.14□□□□□ -1.91
Smc1a-201ENSMUST00000045312 Stard9Q80TF6 4561 aa3.13□□□□□ -1.91
Smc1a-201ENSMUST00000045312 Crct1Q6PAI5 102 aa3.11□□□□□ -1.91
Smc1a-201ENSMUST00000045312 Dnah5Q8VHE6 4621 aa3.11□□□□□ -1.91
Smc1a-201ENSMUST00000045312 Dnah3Q8BW94 4083 aa3.11□□□□□ -1.91
Smc1a-201ENSMUST00000045312 PlecQ9QXS1 4691 aaKnown RBP3.1□□□□□ -1.91
Smc1a-201ENSMUST00000045312 Krtap4-1Q3UUY3 169 aa3.1□□□□□ -1.91
Smc1a-201ENSMUST00000045312 Dnah10D3YYQ8 4591 aa3.1□□□□□ -1.91
Smc1a-201ENSMUST00000045312 Gm19402J3QJV4 266 aa3.06□□□□□ -1.92
Smc1a-201ENSMUST00000045312 Sprr2a3Q4KL71 83 aa3.06□□□□□ -1.92
Smc1a-201ENSMUST00000045312 Sprr2a1Q9CQK8 83 aa3.06□□□□□ -1.92
Smc1a-201ENSMUST00000045312 Dnah1E9Q8T7 4250 aa3.06□□□□□ -1.92
Smc1a-201ENSMUST00000045312 Dnah6E9Q0B6 4144 aa3.04□□□□□ -1.92
Retrieved 100 of 22,080 RNA–protein pairs in 130.1 ms