RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Gm10401E9Q3K6 71 aa4.7□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Gm10570F6VB42 170 aa4.7□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Smim29Q8R043 75 aa4.7□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Igkv3-2A0A075B5P0 119 aa4.7□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Gm5617Q91VN2 117 aa4.7□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Gm17577J3QNF7 156 aa4.69□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Gm17349F7BGH6 99 aa4.69□□□□□ -1.66
Clrn1-202ENSMUST00000055636 4933415A04RikQ9D443 101 aa4.69□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Igkv1-122A0A140T8M9 119 aa4.69□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Sfta2E9PXB6 77 aa4.69□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Prr15lQ8JZM2 100 aa4.69□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Gm17509Q9CZ61 145 aa4.69□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Igkv4-92A0A0B4J1I2 117 aa4.68□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Gm16181B0V2H2 73 aa4.67□□□□□ -1.66
Clrn1-202ENSMUST00000055636 1700042G07RikB1AUF7 90 aa4.67□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Spint4Q9D263 159 aa4.67□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Spink8Q09TK9 105 aa4.66□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Sprr2jO70561 109 aa4.66□□□□□ -1.66
Clrn1-202ENSMUST00000055636 Cox7b2Q9D2H1 82 aa4.66□□□□□ -1.66
Clrn1-202ENSMUST00000055636 A0A286YE02 88 aa4.65□□□□□ -1.66
Clrn1-202ENSMUST00000055636 TgO08710 2766 aa4.65□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Gm7276Q3TYW4 209 aa4.65□□□□□ -1.67
Clrn1-202ENSMUST00000055636 BC048502Q80Y74 154 aa4.65□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Gm16485Q8C4B7 115 aa4.65□□□□□ -1.67
Clrn1-202ENSMUST00000055636 C130032M10RikQ8C888 123 aa4.65□□□□□ -1.67
Clrn1-202ENSMUST00000055636 TnxbO35452 4006 aa4.65□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Fras1Q80T14 4010 aa4.64□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Gm9507D3Z5T3 223 aa4.64□□□□□ -1.67
Clrn1-202ENSMUST00000055636 OxtP35454 125 aa4.64□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Cdk2ap2Q9CPY4 127 aa4.64□□□□□ -1.67
Clrn1-202ENSMUST00000055636 HrnrQ8VHD8 2496 aa4.64□□□□□ -1.67
Clrn1-202ENSMUST00000055636 B9d2Q3UK10 175 aa4.64□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Camk2n2Q78WH7 79 aa4.64□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Sprr4Q8CGN8 76 aa4.64□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Gm11939A2A592 99 aa4.63□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Defa28D3Z1V9 94 aa4.63□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Gm26620Q9CY65 116 aa4.63□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Cox6a2P43023 97 aa4.62□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Nupr2Q497P3 102 aa4.62□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Huwe1Q7TMY8 4377 aaKnown RBP4.62□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Defb12Q8K4N3 78 aa4.61□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Defb40Q70KL2 73 aa4.61□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Coa6Q8BGD8 79 aa4.61□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Mrpl34Q99N91 92 aa4.61□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Igkv8-19A0A0G2JFN8 121 aa4.6□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Igkv3-10A0A0G2JGN0 119 aa4.6□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Gm44790A0A0N4SV91 103 aa4.6□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Cdc42se1Q8BHL7 80 aa4.6□□□□□ -1.67
Clrn1-202ENSMUST00000055636 PrkdcP97313 4128 aa4.6□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Dnah17Q69Z23 4481 aa4.6□□□□□ -1.67
Clrn1-202ENSMUST00000055636 PscaP57096 123 aa4.59□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Phf5aP83870 110 aaKnown RBP4.59□□□□□ -1.67
Clrn1-202ENSMUST00000055636 Fam168bQ80XQ8 194 aa4.59□□□□□ -1.68
Clrn1-202ENSMUST00000055636 AI606181Q8C7B9 129 aa4.58□□□□□ -1.68
Clrn1-202ENSMUST00000055636 2310061N02RikQ9D6S9 174 aa4.58□□□□□ -1.68
Clrn1-202ENSMUST00000055636 Igkv3-4A0A140T8Q4 119 aa4.57□□□□□ -1.68
Clrn1-202ENSMUST00000055636 P84750 121 aa4.57□□□□□ -1.68
Clrn1-202ENSMUST00000055636 Gm4707V9GXN5 68 aa4.57□□□□□ -1.68
Clrn1-202ENSMUST00000055636 Dnah1E9Q8T7 4250 aa4.57□□□□□ -1.68
Clrn1-202ENSMUST00000055636 Coa5Q99M07 74 aa4.57□□□□□ -1.68
Clrn1-202ENSMUST00000055636 Gm17521F6QAC8 156 aa4.55□□□□□ -1.68
Clrn1-202ENSMUST00000055636 Dmac1Q9CQ00 111 aa4.55□□□□□ -1.68
Clrn1-202ENSMUST00000055636 1700018G05RikA0A1B0GSI2 66 aa4.55□□□□□ -1.68
Clrn1-202ENSMUST00000055636 Fam104aA2A6P4 185 aa4.55□□□□□ -1.68
Clrn1-202ENSMUST00000055636 Vpreb3D3Z6J4 130 aa4.55□□□□□ -1.68
Clrn1-202ENSMUST00000055636 Ube2bP63147 152 aa4.55□□□□□ -1.68
Clrn1-202ENSMUST00000055636 Gm37013Q8K491 104 aa4.55□□□□□ -1.68
Clrn1-202ENSMUST00000055636 Dnah11E9Q7N9 4488 aa4.54□□□□□ -1.68
Clrn1-202ENSMUST00000055636 Plac8Q9JI48 112 aa4.53□□□□□ -1.68
Clrn1-202ENSMUST00000055636 Igkv3-12A0A140T8P0 119 aa4.52□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Gm21886J3QJU9 214 aa4.52□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Sprr1aQ62266 144 aa4.52□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Gm9918Q8BUR5 174 aa4.52□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Krtap10-10A0A1W2P7T6 217 aa4.52□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Atox1O08997 68 aaKnown RBP4.52□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Reg3aO09037 175 aa4.52□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Krtap10-4Q08EG8 221 aa4.52□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Dnah9B1AR51 4484 aa4.51□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Gm11627A6PWP4 55 aa4.5□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Gm10837Q3UTT8 145 aa4.5□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Defb11Q8R2I7 77 aa4.5□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Zcchc13Q9D548 170 aa4.5□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Obox2E9PXV9 151 aa4.49□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Wfdc13Q5DQQ6 81 aa4.49□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Odf3bQ5M8M2 238 aa4.49□□□□□ -1.69
Clrn1-202ENSMUST00000055636 1700074P13RikQ9D9G7 251 aa4.49□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Rpl37aP61514 92 aa4.49□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Dync2h1Q45VK7 4306 aa4.48□□□□□ -1.69
Clrn1-202ENSMUST00000055636 A0A286YE49 62 aa4.48□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Dnah5Q8VHE6 4621 aa4.48□□□□□ -1.69
Clrn1-202ENSMUST00000055636 PlecQ9QXS1 4691 aaKnown RBP4.48□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Prol1E9PYQ4 312 aa4.48□□□□□ -1.69
Clrn1-202ENSMUST00000055636 U90926O08546 118 aa4.48□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Ly6g6cQ9Z1Q4 126 aa4.48□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Gm12353A2AGJ4 60 aa4.47□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Ube2aQ9Z255 152 aa4.47□□□□□ -1.69
Clrn1-202ENSMUST00000055636 Phxr4P15974 95 aa4.46□□□□□ -1.7
Clrn1-202ENSMUST00000055636 SycnQ8VCK7 134 aa4.46□□□□□ -1.7
Clrn1-202ENSMUST00000055636 2310050C09RikG5E8Z3 280 aa4.46□□□□□ -1.7
Clrn1-202ENSMUST00000055636 Gm28230A0A0A0MQ91 144 aa4.45□□□□□ -1.7
Retrieved 100 of 22,080 RNA–protein pairs in 74.1 ms