RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Gm37013Q8K491 104 aa12.35□□□□□ -0.43
Ccdc50-201ENSMUST00000039443 Igkv3-4A0A140T8Q4 119 aa12.35□□□□□ -0.43
Ccdc50-201ENSMUST00000039443 Wfdc6bF6ULY1 148 aa12.34□□□□□ -0.43
Ccdc50-201ENSMUST00000039443 Prol1E9PYQ4 312 aa12.33□□□□□ -0.44
Ccdc50-201ENSMUST00000039443 Sprr1aQ62266 144 aa12.32□□□□□ -0.44
Ccdc50-201ENSMUST00000039443 Coa6Q8BGD8 79 aa12.31□□□□□ -0.44
Ccdc50-201ENSMUST00000039443 Vpreb3D3Z6J4 130 aa12.3□□□□□ -0.44
Ccdc50-201ENSMUST00000039443 Obox2E9PXV9 151 aa12.3□□□□□ -0.44
Ccdc50-201ENSMUST00000039443 Igkv8-19A0A0G2JFN8 121 aa12.3□□□□□ -0.44
Ccdc50-201ENSMUST00000039443 Gm16485Q8C4B7 115 aa12.29□□□□□ -0.44
Ccdc50-201ENSMUST00000039443 PscaP57096 123 aa12.28□□□□□ -0.44
Ccdc50-201ENSMUST00000039443 Gm44790A0A0N4SV91 103 aa12.26□□□□□ -0.45
Ccdc50-201ENSMUST00000039443 Gm17521F6QAC8 156 aa12.26□□□□□ -0.45
Ccdc50-201ENSMUST00000039443 Cdc42se1Q8BHL7 80 aa12.25□□□□□ -0.45
Ccdc50-201ENSMUST00000039443 Defa28D3Z1V9 94 aa12.24□□□□□ -0.45
Ccdc50-201ENSMUST00000039443 Fam168bQ80XQ8 194 aa12.23□□□□□ -0.45
Ccdc50-201ENSMUST00000039443 Spint4Q9D263 159 aa12.22□□□□□ -0.45
Ccdc50-201ENSMUST00000039443 B9d2Q3UK10 175 aa12.21□□□□□ -0.45
Ccdc50-201ENSMUST00000039443 Igkv3-12A0A140T8P0 119 aa12.2□□□□□ -0.46
Ccdc50-201ENSMUST00000039443 Ube2bP63147 152 aa12.2□□□□□ -0.46
Ccdc50-201ENSMUST00000039443 U90926O08546 118 aa12.19□□□□□ -0.46
Ccdc50-201ENSMUST00000039443 Defb40Q70KL2 73 aa12.19□□□□□ -0.46
Ccdc50-201ENSMUST00000039443 Defb11Q8R2I7 77 aa12.18□□□□□ -0.46
Ccdc50-201ENSMUST00000039443 Dnah6E9Q0B6 4144 aa12.17□□□□□ -0.46
Ccdc50-201ENSMUST00000039443 Fam104aA2A6P4 185 aa12.17□□□□□ -0.46
Ccdc50-201ENSMUST00000039443 Atox1O08997 68 aaKnown RBP12.17□□□□□ -0.46
Ccdc50-201ENSMUST00000039443 Gm4707V9GXN5 68 aa12.16□□□□□ -0.46
Ccdc50-201ENSMUST00000039443 VwfQ8CIZ8 2813 aa12.14□□□□□ -0.47
Ccdc50-201ENSMUST00000039443 Igkv3-10A0A0G2JGN0 119 aa12.12□□□□□ -0.47
Ccdc50-201ENSMUST00000039443 1700018G05RikA0A1B0GSI2 66 aa12.12□□□□□ -0.47
Ccdc50-201ENSMUST00000039443 Gm21886J3QJU9 214 aa12.12□□□□□ -0.47
Ccdc50-201ENSMUST00000039443 Chchd10Q7TNL9 138 aa12.11□□□□□ -0.47
Ccdc50-201ENSMUST00000039443 Megf8P60882 2789 aa12.1□□□□□ -0.47
Ccdc50-201ENSMUST00000039443 Kmt2aP55200 3966 aa12.1□□□□□ -0.47
Ccdc50-201ENSMUST00000039443 AI606181Q8C7B9 129 aa12.1□□□□□ -0.47
Ccdc50-201ENSMUST00000039443 Gm10197F6QEY5 67 aa12.09□□□□□ -0.47
Ccdc50-201ENSMUST00000039443 Coa5Q99M07 74 aa12.09□□□□□ -0.47
Ccdc50-201ENSMUST00000039443 A0A286YE49 62 aa12.08□□□□□ -0.48
Ccdc50-201ENSMUST00000039443 Dnah10D3YYQ8 4591 aa12.08□□□□□ -0.48
Ccdc50-201ENSMUST00000039443 Gm20604F8WIA3 75 aa12.06□□□□□ -0.48
Ccdc50-201ENSMUST00000039443 Bean1Q9EQG5 255 aa12.05□□□□□ -0.48
Ccdc50-201ENSMUST00000039443 Notch1Q01705 2531 aa12.03□□□□□ -0.48
Ccdc50-201ENSMUST00000039443 Defb12Q8K4N3 78 aa12.03□□□□□ -0.48
Ccdc50-201ENSMUST00000039443 Dnah3Q8BW94 4083 aa12.03□□□□□ -0.48
Ccdc50-201ENSMUST00000039443 Gm10139O88245 57 aa12.02□□□□□ -0.49
Ccdc50-201ENSMUST00000039443 Gm28230A0A0A0MQ91 144 aa12.01□□□□□ -0.49
Ccdc50-201ENSMUST00000039443 Gm17349F7BGH6 99 aa12.01□□□□□ -0.49
Ccdc50-201ENSMUST00000039443 Reg3aO09037 175 aa12.01□□□□□ -0.49
Ccdc50-201ENSMUST00000039443 Sslp1Q3UN54 99 aa12□□□□□ -0.49
Ccdc50-201ENSMUST00000039443 Sox16Q62247 57 aa11.99□□□□□ -0.49
Ccdc50-201ENSMUST00000039443 Odf3bQ5M8M2 238 aa11.99□□□□□ -0.49
Ccdc50-201ENSMUST00000039443 Zcchc13Q9D548 170 aa11.99□□□□□ -0.49
Ccdc50-201ENSMUST00000039443 Dnah14A0A140LIJ4 4489 aa11.98□□□□□ -0.49
Ccdc50-201ENSMUST00000039443 AW011738F6S7Q2 159 aa11.96□□□□□ -0.49
Ccdc50-201ENSMUST00000039443 SycnQ8VCK7 134 aa11.96□□□□□ -0.49
Ccdc50-201ENSMUST00000039443 Ube2aQ9Z255 152 aa11.96□□□□□ -0.5
Ccdc50-201ENSMUST00000039443 1700074P13RikQ9D9G7 251 aa11.95□□□□□ -0.5
Ccdc50-201ENSMUST00000039443 Wfdc10Q3V2J9 124 aa11.92□□□□□ -0.5
Ccdc50-201ENSMUST00000039443 Wfdc13Q5DQQ6 81 aa11.92□□□□□ -0.5
Ccdc50-201ENSMUST00000039443 Pkd1l1Q8R526 2615 aa11.89□□□□□ -0.51
Ccdc50-201ENSMUST00000039443 Phxr4P15974 95 aa11.87□□□□□ -0.51
Ccdc50-201ENSMUST00000039443 Gm2310J3QNJ2 377 aa11.86□□□□□ -0.51
Ccdc50-201ENSMUST00000039443 Rpl37aP61514 92 aa11.85□□□□□ -0.51
Ccdc50-201ENSMUST00000039443 Q8K1L6 76 aa11.84□□□□□ -0.51
Ccdc50-201ENSMUST00000039443 Igkv3-7A0A0G2JE31 119 aa11.82□□□□□ -0.52
Ccdc50-201ENSMUST00000039443 Muc6Q80T03 2850 aa11.82□□□□□ -0.52
Ccdc50-201ENSMUST00000039443 Gm10837Q3UTT8 145 aa11.81□□□□□ -0.52
Ccdc50-201ENSMUST00000039443 Dnah1E9Q8T7 4250 aa11.8□□□□□ -0.52
Ccdc50-201ENSMUST00000039443 Phf5aP83870 110 aaKnown RBP11.8□□□□□ -0.52
Ccdc50-201ENSMUST00000039443 4933415A04RikQ9D443 101 aa11.8□□□□□ -0.52
Ccdc50-201ENSMUST00000039443 2310061N02RikQ9D6S9 174 aa11.79□□□□□ -0.52
Ccdc50-201ENSMUST00000039443 Chtf8P0CG14 533 aa11.78□□□□□ -0.52
Ccdc50-201ENSMUST00000039443 Tenm2Q9WTS5 2764 aa11.78□□□□□ -0.52
Ccdc50-201ENSMUST00000039443 Igkv3-5A0A140T8M6 119 aa11.76□□□□□ -0.53
Ccdc50-201ENSMUST00000039443 FasnP19096 2504 aaKnown RBP11.74□□□□□ -0.53
Ccdc50-201ENSMUST00000039443 Dnah17Q69Z23 4481 aa11.74□□□□□ -0.53
Ccdc50-201ENSMUST00000039443 Gm27235Q3UW50 83 aa11.73□□□□□ -0.53
Ccdc50-201ENSMUST00000039443 TgO08710 2766 aa11.71□□□□□ -0.54
Ccdc50-201ENSMUST00000039443 Gm10160F6Y577 67 aa11.69□□□□□ -0.54
Ccdc50-201ENSMUST00000039443 Huwe1Q7TMY8 4377 aaKnown RBP11.69□□□□□ -0.54
Ccdc50-201ENSMUST00000039443 PrkdcP97313 4128 aa11.68□□□□□ -0.54
Ccdc50-201ENSMUST00000039443 Gm10267M0QWD8 85 aa11.68□□□□□ -0.54
Ccdc50-201ENSMUST00000039443 1700012A03RikQ9DAF1 130 aa11.67□□□□□ -0.54
Ccdc50-201ENSMUST00000039443 Dnah7bL7N1Y0 4068 aa11.67□□□□□ -0.54
Ccdc50-201ENSMUST00000039443 Defb9Q8R2I6 67 aa11.66□□□□□ -0.54
Ccdc50-201ENSMUST00000039443 6030445D17RikE9Q8F9 148 aa11.64□□□□□ -0.55
Ccdc50-201ENSMUST00000039443 Gm9508A0A1W2P7W0 230 aa11.64□□□□□ -0.55
Ccdc50-201ENSMUST00000039443 Csmd3Q80T79 3707 aa11.64□□□□□ -0.55
Ccdc50-201ENSMUST00000039443 Igkv3-3A0A140T8Q0 119 aa11.61□□□□□ -0.55
Ccdc50-201ENSMUST00000039443 Nupr2Q497P3 102 aa11.61□□□□□ -0.55
Ccdc50-201ENSMUST00000039443 Gm10065F6TJM2 114 aa11.59□□□□□ -0.55
Ccdc50-201ENSMUST00000039443 Znf706Q9D115 76 aaKnown RBP11.55□□□□□ -0.56
Ccdc50-201ENSMUST00000039443 Gm28374F6SG70 93 aa11.54□□□□□ -0.56
Ccdc50-201ENSMUST00000039443 Stab2Q8R4U0 2559 aa11.53□□□□□ -0.56
Ccdc50-201ENSMUST00000039443 Gm10642Q3TWM1 71 aa11.53□□□□□ -0.56
Ccdc50-201ENSMUST00000039443 Ndufb1P0DN34 57 aa11.52□□□□□ -0.56
Ccdc50-201ENSMUST00000039443 Gm10643Q3URG9 111 aa11.52□□□□□ -0.57
Ccdc50-201ENSMUST00000039443 Gm20661K7N787 53 aa11.51□□□□□ -0.57
Ccdc50-201ENSMUST00000039443 Dync2h1Q45VK7 4306 aa11.51□□□□□ -0.57
Ccdc50-201ENSMUST00000039443 Cypt14J3QPF7 87 aa11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 89.6 ms