RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Gm44790A0A0N4SV91 103 aa9.58□□□□□ -0.88
Nkx3-1-201ENSMUST00000022646 Defa28D3Z1V9 94 aa9.58□□□□□ -0.88
Nkx3-1-201ENSMUST00000022646 SnurfQ9WU12 71 aa9.58□□□□□ -0.88
Nkx3-1-201ENSMUST00000022646 Defb10Q8R2I8 73 aa9.57□□□□□ -0.88
Nkx3-1-201ENSMUST00000022646 Igkv3-4A0A140T8Q4 119 aa9.57□□□□□ -0.88
Nkx3-1-201ENSMUST00000022646 U90926O08546 118 aa9.57□□□□□ -0.88
Nkx3-1-201ENSMUST00000022646 Gm9508A0A1W2P7W0 230 aa9.56□□□□□ -0.88
Nkx3-1-201ENSMUST00000022646 Fam104aA2A6P4 185 aa9.55□□□□□ -0.88
Nkx3-1-201ENSMUST00000022646 Brk1Q91VR8 75 aa9.55□□□□□ -0.88
Nkx3-1-201ENSMUST00000022646 2310061N02RikQ9D6S9 174 aa9.55□□□□□ -0.88
Nkx3-1-201ENSMUST00000022646 1700018G05RikA0A1B0GSI2 66 aa9.54□□□□□ -0.88
Nkx3-1-201ENSMUST00000022646 Spata3Q9D9T6 193 aa9.54□□□□□ -0.88
Nkx3-1-201ENSMUST00000022646 Megf8P60882 2789 aa9.53□□□□□ -0.88
Nkx3-1-201ENSMUST00000022646 B9d2Q3UK10 175 aa9.53□□□□□ -0.88
Nkx3-1-201ENSMUST00000022646 SycnQ8VCK7 134 aa9.53□□□□□ -0.88
Nkx3-1-201ENSMUST00000022646 Gm12353A2AGJ4 60 aa9.52□□□□□ -0.89
Nkx3-1-201ENSMUST00000022646 Q8BT88 171 aa9.52□□□□□ -0.89
Nkx3-1-201ENSMUST00000022646 Igkv8-19A0A0G2JFN8 121 aa9.52□□□□□ -0.89
Nkx3-1-201ENSMUST00000022646 Spink8Q09TK9 105 aa9.51□□□□□ -0.89
Nkx3-1-201ENSMUST00000022646 Wfdc13Q5DQQ6 81 aa9.51□□□□□ -0.89
Nkx3-1-201ENSMUST00000022646 Defa27F2Z403 93 aa9.51□□□□□ -0.89
Nkx3-1-201ENSMUST00000022646 Gm37013Q8K491 104 aa9.49□□□□□ -0.89
Nkx3-1-201ENSMUST00000022646 AW011738F6S7Q2 159 aa9.49□□□□□ -0.89
Nkx3-1-201ENSMUST00000022646 Gm10837Q3UTT8 145 aa9.49□□□□□ -0.89
Nkx3-1-201ENSMUST00000022646 UqcrqQ9CQ69 82 aa9.48□□□□□ -0.89
Nkx3-1-201ENSMUST00000022646 Stab2Q8R4U0 2559 aa9.48□□□□□ -0.89
Nkx3-1-201ENSMUST00000022646 Pet100P0DJE0 76 aa9.47□□□□□ -0.89
Nkx3-1-201ENSMUST00000022646 Zcchc13Q9D548 170 aa9.47□□□□□ -0.89
Nkx3-1-201ENSMUST00000022646 Muc6Q80T03 2850 aa9.47□□□□□ -0.89
Nkx3-1-201ENSMUST00000022646 Smlr1J3QMJ4 66 aa9.47□□□□□ -0.89
Nkx3-1-201ENSMUST00000022646 HrnrQ8VHD8 2496 aa9.46□□□□□ -0.9
Nkx3-1-201ENSMUST00000022646 Gm21886J3QJU9 214 aa9.46□□□□□ -0.9
Nkx3-1-201ENSMUST00000022646 Serp1Q9Z1W5 66 aa9.45□□□□□ -0.9
Nkx3-1-201ENSMUST00000022646 Gm10570F6VB42 170 aa9.45□□□□□ -0.9
Nkx3-1-201ENSMUST00000022646 Phf5aP83870 110 aaKnown RBP9.44□□□□□ -0.9
Nkx3-1-201ENSMUST00000022646 Gm10139O88245 57 aa9.44□□□□□ -0.9
Nkx3-1-201ENSMUST00000022646 Odf3bQ5M8M2 238 aa9.44□□□□□ -0.9
Nkx3-1-201ENSMUST00000022646 Tenm2Q9WTS5 2764 aa9.43□□□□□ -0.9
Nkx3-1-201ENSMUST00000022646 Igkv3-10A0A0G2JGN0 119 aa9.42□□□□□ -0.9
Nkx3-1-201ENSMUST00000022646 Igsf10Q3V1M1 2594 aa9.42□□□□□ -0.9
Nkx3-1-201ENSMUST00000022646 Gm28230A0A0A0MQ91 144 aa9.41□□□□□ -0.9
Nkx3-1-201ENSMUST00000022646 Wfdc10Q3V2J9 124 aa9.4□□□□□ -0.9
Nkx3-1-201ENSMUST00000022646 Reg3aO09037 175 aa9.4□□□□□ -0.91
Nkx3-1-201ENSMUST00000022646 Ube2aQ9Z255 152 aa9.39□□□□□ -0.91
Nkx3-1-201ENSMUST00000022646 Gm17349F7BGH6 99 aa9.38□□□□□ -0.91
Nkx3-1-201ENSMUST00000022646 H2al1aQ5M8Q2 105 aa9.38□□□□□ -0.91
Nkx3-1-201ENSMUST00000022646 Igkv3-7A0A0G2JE31 119 aa9.37□□□□□ -0.91
Nkx3-1-201ENSMUST00000022646 Nupr2Q497P3 102 aa9.37□□□□□ -0.91
Nkx3-1-201ENSMUST00000022646 Chchd10Q7TNL9 138 aa9.37□□□□□ -0.91
Nkx3-1-201ENSMUST00000022646 Coa6Q8BGD8 79 aa9.37□□□□□ -0.91
Nkx3-1-201ENSMUST00000022646 Dync2h1Q45VK7 4306 aa9.36□□□□□ -0.91
Nkx3-1-201ENSMUST00000022646 AI606181Q8C7B9 129 aa9.36□□□□□ -0.91
Nkx3-1-201ENSMUST00000022646 1700012A03RikQ9DAF1 130 aa9.35□□□□□ -0.91
Nkx3-1-201ENSMUST00000022646 Defb12Q8K4N3 78 aa9.34□□□□□ -0.91
Nkx3-1-201ENSMUST00000022646 Defb9Q8R2I6 67 aa9.34□□□□□ -0.91
Nkx3-1-201ENSMUST00000022646 Huwe1Q7TMY8 4377 aaKnown RBP9.34□□□□□ -0.91
Nkx3-1-201ENSMUST00000022646 Pkd1l1Q8R526 2615 aa9.33□□□□□ -0.92
Nkx3-1-201ENSMUST00000022646 Dnah11E9Q7N9 4488 aa9.32□□□□□ -0.92
Nkx3-1-201ENSMUST00000022646 Rpl37aP61514 92 aa9.32□□□□□ -0.92
Nkx3-1-201ENSMUST00000022646 A530084C06RikQ3UTW2 186 aa9.32□□□□□ -0.92
Nkx3-1-201ENSMUST00000022646 Spint4Q9D263 159 aa9.32□□□□□ -0.92
Nkx3-1-201ENSMUST00000022646 Dnah9B1AR51 4484 aa9.32□□□□□ -0.92
Nkx3-1-201ENSMUST00000022646 FasnP19096 2504 aaKnown RBP9.32□□□□□ -0.92
Nkx3-1-201ENSMUST00000022646 TnxbO35452 4006 aa9.31□□□□□ -0.92
Nkx3-1-201ENSMUST00000022646 Dph3Q8K0W9 82 aa9.31□□□□□ -0.92
Nkx3-1-201ENSMUST00000022646 A0A286YE49 62 aa9.3□□□□□ -0.92
Nkx3-1-201ENSMUST00000022646 Gm4707V9GXN5 68 aa9.3□□□□□ -0.92
Nkx3-1-201ENSMUST00000022646 Plac8Q9JI48 112 aa9.29□□□□□ -0.92
Nkx3-1-201ENSMUST00000022646 6030445D17RikE9Q8F9 148 aa9.29□□□□□ -0.92
Nkx3-1-201ENSMUST00000022646 Igkv3-5A0A140T8M6 119 aa9.28□□□□□ -0.92
Nkx3-1-201ENSMUST00000022646 Atox1O08997 68 aaKnown RBP9.26□□□□□ -0.93
Nkx3-1-201ENSMUST00000022646 Gm27235Q3UW50 83 aa9.25□□□□□ -0.93
Nkx3-1-201ENSMUST00000022646 1700074P13RikQ9D9G7 251 aa9.25□□□□□ -0.93
Nkx3-1-201ENSMUST00000022646 Gm10642Q3TWM1 71 aa9.24□□□□□ -0.93
Nkx3-1-201ENSMUST00000022646 Gm20604F8WIA3 75 aa9.22□□□□□ -0.93
Nkx3-1-201ENSMUST00000022646 Q8K1L6 76 aa9.22□□□□□ -0.93
Nkx3-1-201ENSMUST00000022646 Coa5Q99M07 74 aa9.22□□□□□ -0.93
Nkx3-1-201ENSMUST00000022646 Gm9507D3Z5T3 223 aa9.21□□□□□ -0.93
Nkx3-1-201ENSMUST00000022646 Gm10065F6TJM2 114 aa9.21□□□□□ -0.93
Nkx3-1-201ENSMUST00000022646 Cdc42se1Q8BHL7 80 aa9.21□□□□□ -0.93
Nkx3-1-201ENSMUST00000022646 Fras1Q80T14 4010 aa9.2□□□□□ -0.94
Nkx3-1-201ENSMUST00000022646 Gm2310J3QNJ2 377 aa9.19□□□□□ -0.94
Nkx3-1-201ENSMUST00000022646 PrkdcP97313 4128 aa9.19□□□□□ -0.94
Nkx3-1-201ENSMUST00000022646 Gm10197F6QEY5 67 aa9.17□□□□□ -0.94
Nkx3-1-201ENSMUST00000022646 Krtap29-1A2A5X4 342 aa9.17□□□□□ -0.94
Nkx3-1-201ENSMUST00000022646 Gm10337F7DEP7 55 aa9.16□□□□□ -0.94
Nkx3-1-201ENSMUST00000022646 Mrpl55Q9CZ83 127 aa9.16□□□□□ -0.94
Nkx3-1-201ENSMUST00000022646 Gm10267M0QWD8 85 aa9.12□□□□□ -0.95
Nkx3-1-201ENSMUST00000022646 Adm2Q7TNK8 150 aa9.12□□□□□ -0.95
Nkx3-1-201ENSMUST00000022646 PlecQ9QXS1 4691 aaKnown RBP9.11□□□□□ -0.95
Nkx3-1-201ENSMUST00000022646 Gm9918Q8BUR5 174 aa9.1□□□□□ -0.95
Nkx3-1-201ENSMUST00000022646 Chtf8P0CG14 533 aa9.09□□□□□ -0.95
Nkx3-1-201ENSMUST00000022646 Anapc11Q9CPX9 84 aa9.09□□□□□ -0.95
Nkx3-1-201ENSMUST00000022646 NbdyA0A0N4SUI7 68 aa9.07□□□□□ -0.96
Nkx3-1-201ENSMUST00000022646 1600014C23RikQ9DAX4 101 aa9.07□□□□□ -0.96
Nkx3-1-201ENSMUST00000022646 H2al1bA0A087WP11 105 aa9.05□□□□□ -0.96
Nkx3-1-201ENSMUST00000022646 H2al1kJ3QP08 105 aa9.05□□□□□ -0.96
Nkx3-1-201ENSMUST00000022646 H2al1eQ810S6 105 aa9.05□□□□□ -0.96
Nkx3-1-201ENSMUST00000022646 H2al1mQ9DAD9 105 aa9.05□□□□□ -0.96
Nkx3-1-201ENSMUST00000022646 Znf706Q9D115 76 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms