RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 NrepQ07475 68 aa6.32□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Dnah7cA0A087WR13 4024 aa6.32□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Ntn5Q3UQ22 452 aa6.31□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Igkv1-35A0A0G2JDE5 120 aa6.31□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Tcl1b3P56842 122 aa6.31□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Gm10845Q3UNY9 185 aa6.31□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Adm2Q7TNK8 150 aa6.31□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 BC048502Q80Y74 154 aa6.31□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Defb9Q8R2I6 67 aa6.31□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Gm26920S4R2A5 56 aa6.31□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Ighv1-62-2A0A0A6YXZ4 119 aa6.3□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Igkv4-58A0A0G2JGI6 119 aa6.3□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Cox7cP17665 63 aa6.3□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Cd164Q9R0L9 197 aa6.3□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 PkigO70139 76 aa6.29□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Gm10549Q3URY4 149 aa6.29□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Gm5142Q8C5X9 133 aa6.29□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Igkv1-122A0A140T8M9 119 aa6.29□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Defa28D3Z1V9 94 aa6.29□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Ccl25O35903 144 aa6.29□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Vps13dB1ART2 4390 aa6.29□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Gm10065F6TJM2 114 aa6.29□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Rpl28P41105 137 aaKnown RBP6.29□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 P84750 121 aa6.28□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 D130052B06RikQ3UW13 202 aa6.28□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Prol1E9PYQ4 312 aa6.28□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Zcchc13Q9D548 170 aa6.28□□□□□ -1.4
Ccdc38-201ENSMUST00000092215 Ighv2-2A0A075B5P8 116 aa6.27□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Ighv2-5A0A0A6YY69 116 aa6.27□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 P01821 116 aa6.27□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Spink13Q3UTS8 97 aa6.27□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Wdr38Q9D994 303 aa6.27□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Gm16381A0A1Y7VKT9 73 aa6.27□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Smim26Q3V460 107 aa6.27□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 2310034G01RikA0A286YDL3 209 aa6.26□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Gm11011D3Z3L9 86 aa6.26□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Cox6cQ9CPQ1 76 aa6.26□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Lgals4Q8K419 326 aa6.25□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Dmac1Q9CQ00 111 aa6.25□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Rpl39lQ9CQD0 51 aa6.25□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Wfdc10Q3V2J9 124 aa6.24□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Csdc2Q91YQ3 154 aa6.24□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 P01819 144 aa6.24□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Igkv2-109A0A075B5K6 120 aa6.23□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Krtap29-1A2A5X4 342 aa6.23□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Gm10642Q3TWM1 71 aa6.23□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Defb37Q7TMD2 62 aa6.23□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Q9DAA7 145 aa6.23□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 TeppQ6IMH0 216 aa6.23□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Xlr5cQ9JJR2 179 aa6.23□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Ube2aQ9Z255 152 aa6.23□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Hint1P70349 126 aaKnown RBP6.23□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 A0A286YE02 88 aa6.22□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Gpr15lA0A0B4J1N3 78 aa6.22□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Gm10135F6TEE5 83 aa6.22□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Wfdc13Q5DQQ6 81 aa6.22□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 CenpwQ3URR0 86 aa6.22□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Ryr1E9PZQ0 5035 aa6.22□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 Mrpl52Q9D0Y8 121 aa6.21□□□□□ -1.41
Ccdc38-201ENSMUST00000092215 A330070K13RikQ8CA53 115 aa6.21□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Mtatp8P03930 67 aa6.2□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Gm10320E9PW43 113 aa6.2□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 1700020N15RikL7MTX3 112 aa6.2□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Sigmar1O55242 223 aa6.2□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Gm26602M0QWA4 95 aa6.2□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Msrb1Q9JLC3 116 aa6.2□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Tmem243B2RVB9 118 aa6.19□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Ube2v1Q9CZY3 147 aa6.19□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Trav3-4A0A075B654 114 aa6.19□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 RetnlbQ99P86 105 aa6.19□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Vps25Q9CQ80 176 aa6.19□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 LbhQ9CX60 105 aa6.19□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Igkv8-26A0A075B5N5 123 aa6.18□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Ighv10-1A0A0B4J1J6 119 aa6.18□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 6030445D17RikE9Q8F9 148 aa6.18□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Gm7102J3QQ10 178 aa6.18□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Gm10770F7D043 238 aa6.18□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Smr3aQ61900 147 aa6.18□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Cited1P97769 203 aa6.17□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Gm10570F6VB42 170 aa6.17□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Dnah2P0C6F1 4456 aa6.17□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 4930524J08RikQ9CUJ5 163 aa6.17□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Ryr2E9Q401 4966 aaKnown RBP6.16□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Elof1P60003 83 aa6.16□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 NbdyA0A0N4SUI7 68 aa6.16□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Vpreb2P13373 142 aa6.15□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Igkv1-110A0A0B4J1I0 119 aa6.15□□□□□ -1.42
Ccdc38-201ENSMUST00000092215 Fam104aA2A6P4 185 aa6.15□□□□□ -1.43
Ccdc38-201ENSMUST00000092215 Krtap14O08640 167 aa6.14□□□□□ -1.43
Ccdc38-201ENSMUST00000092215 ScxQ64124 207 aa6.14□□□□□ -1.43
Ccdc38-201ENSMUST00000092215 Gm17521F6QAC8 156 aa6.14□□□□□ -1.43
Ccdc38-201ENSMUST00000092215 Lamtor3O88653 124 aa6.14□□□□□ -1.43
Ccdc38-201ENSMUST00000092215 Dync1h1Q9JHU4 4644 aaKnown RBP6.14□□□□□ -1.43
Ccdc38-201ENSMUST00000092215 Gm10767Q3TQP0 103 aa6.13□□□□□ -1.43
Ccdc38-201ENSMUST00000092215 Fat1A0A1L1SQU7 4645 aa6.13□□□□□ -1.43
Ccdc38-201ENSMUST00000092215 Igkv3-5A0A140T8M6 119 aa6.13□□□□□ -1.43
Ccdc38-201ENSMUST00000092215 Anapc11Q9CPX9 84 aa6.11□□□□□ -1.43
Ccdc38-201ENSMUST00000092215 Gm7276Q3TYW4 209 aa6.11□□□□□ -1.43
Ccdc38-201ENSMUST00000092215 5730596B20RikQ8BQ08 205 aa6.11□□□□□ -1.43
Ccdc38-201ENSMUST00000092215 Igf1P05017 153 aa6.1□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 53 ms