RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Gm10135F6TEE5 83 aa17.18■□□□□ 0.34
Tpm1-216ENSMUST00000113707 Insl3O09107 122 aa17.17■□□□□ 0.34
Tpm1-216ENSMUST00000113707 Cox7b2Q9D2H1 82 aa17.17■□□□□ 0.34
Tpm1-216ENSMUST00000113707 2310009B15RikA0A0A6YWI4 143 aa17.16■□□□□ 0.34
Tpm1-216ENSMUST00000113707 Cox6cQ9CPQ1 76 aa17.16■□□□□ 0.34
Tpm1-216ENSMUST00000113707 Gm17509Q9CZ61 145 aa17.16■□□□□ 0.34
Tpm1-216ENSMUST00000113707 Trav13-2A0A075B649 110 aa17.16■□□□□ 0.34
Tpm1-216ENSMUST00000113707 Igkv1-117A0A140T8M0 119 aa17.15■□□□□ 0.34
Tpm1-216ENSMUST00000113707 4930556J24RikQ9D4U7 146 aa17.15■□□□□ 0.34
Tpm1-216ENSMUST00000113707 Gm45213A0A0U1RNZ6 101 aa17.14■□□□□ 0.33
Tpm1-216ENSMUST00000113707 Pglyrp4Q0VB07 374 aa17.14■□□□□ 0.33
Tpm1-216ENSMUST00000113707 Igkv8-16A0A0G2JDG9 121 aa17.14■□□□□ 0.33
Tpm1-216ENSMUST00000113707 Gm16485Q8C4B7 115 aa17.14■□□□□ 0.33
Tpm1-216ENSMUST00000113707 Rpl28P41105 137 aaKnown RBP17.13■□□□□ 0.33
Tpm1-216ENSMUST00000113707 MifP34884 115 aaKnown RBP17.12■□□□□ 0.33
Tpm1-216ENSMUST00000113707 Gm28269A0A087WSG3 125 aa17.12■□□□□ 0.33
Tpm1-216ENSMUST00000113707 9430015G10RikA2ASP7 199 aa17.12■□□□□ 0.33
Tpm1-216ENSMUST00000113707 Gm10518F6UQQ9 182 aa17.1■□□□□ 0.33
Tpm1-216ENSMUST00000113707 Igkv4-92A0A0B4J1I2 117 aa17.1■□□□□ 0.33
Tpm1-216ENSMUST00000113707 Igkv8-18A0A0B4J1J3 123 aa17.1■□□□□ 0.33
Tpm1-216ENSMUST00000113707 Cox8cA6H666 72 aa17.1■□□□□ 0.33
Tpm1-216ENSMUST00000113707 Csdc2Q91YQ3 154 aa17.08■□□□□ 0.33
Tpm1-216ENSMUST00000113707 Hrct1Q9D6B9 109 aa17.08■□□□□ 0.33
Tpm1-216ENSMUST00000113707 Dnah1E9Q8T7 4250 aa17.08■□□□□ 0.32
Tpm1-216ENSMUST00000113707 Gtf2h5Q8K2X8 71 aa17.07■□□□□ 0.32
Tpm1-216ENSMUST00000113707 A730009L09RikA0A1B0GS82 72 aa17.06■□□□□ 0.32
Tpm1-216ENSMUST00000113707 Wfdc12Q9JHY3 85 aa17.06■□□□□ 0.32
Tpm1-216ENSMUST00000113707 Reg3dQ9QUS9 175 aa17.06■□□□□ 0.32
Tpm1-216ENSMUST00000113707 Gm5153P01627 120 aa17.05■□□□□ 0.32
Tpm1-216ENSMUST00000113707 Cox7bP56393 80 aa17.05■□□□□ 0.32
Tpm1-216ENSMUST00000113707 Hbb-b2P02089 147 aa17.04■□□□□ 0.32
Tpm1-216ENSMUST00000113707 Sprr4Q8CGN8 76 aa17.04■□□□□ 0.32
Tpm1-216ENSMUST00000113707 Lgals4Q8K419 326 aa17.03■□□□□ 0.32
Tpm1-216ENSMUST00000113707 Ube2d4D3YUH6 135 aa17.02■□□□□ 0.32
Tpm1-216ENSMUST00000113707 Smim26Q3V460 107 aa17.02■□□□□ 0.32
Tpm1-216ENSMUST00000113707 Dnal4Q9DCM4 105 aa17.02■□□□□ 0.32
Tpm1-216ENSMUST00000113707 Camk2n2Q78WH7 79 aa17.01■□□□□ 0.31
Tpm1-216ENSMUST00000113707 Ufsp1Q9CZP0 217 aa17.01■□□□□ 0.31
Tpm1-216ENSMUST00000113707 Gm10845Q3UNY9 185 aa17.01■□□□□ 0.31
Tpm1-216ENSMUST00000113707 Gm9508A0A1W2P7W0 230 aa17■□□□□ 0.31
Tpm1-216ENSMUST00000113707 Defb11Q8R2I7 77 aa17■□□□□ 0.31
Tpm1-216ENSMUST00000113707 2310061N02RikQ9D6S9 174 aa17■□□□□ 0.31
Tpm1-216ENSMUST00000113707 P01819 144 aa16.99■□□□□ 0.31
Tpm1-216ENSMUST00000113707 Trav14-1A0A0G2JF94 121 aa16.98■□□□□ 0.31
Tpm1-216ENSMUST00000113707 Gm16381A0A1Y7VKT9 73 aa16.98■□□□□ 0.31
Tpm1-216ENSMUST00000113707 Defb29Q8BGW9 78 aa16.98■□□□□ 0.31
Tpm1-216ENSMUST00000113707 Ube2wQ8VDW4 151 aa16.97■□□□□ 0.31
Tpm1-216ENSMUST00000113707 Fam240bJ3QMB3 78 aa16.97■□□□□ 0.31
Tpm1-216ENSMUST00000113707 Gm5142Q8C5X9 133 aa16.95■□□□□ 0.3
Tpm1-216ENSMUST00000113707 1810062G17RikG3X8Y2 129 aa16.95■□□□□ 0.3
Tpm1-216ENSMUST00000113707 Huwe1Q7TMY8 4377 aaKnown RBP16.94■□□□□ 0.3
Tpm1-216ENSMUST00000113707 Ociad2Q9D8W7 154 aa16.94■□□□□ 0.3
Tpm1-216ENSMUST00000113707 A0A286YCN5 57 aa16.93■□□□□ 0.3
Tpm1-216ENSMUST00000113707 AY074887Q8R5F9 132 aa16.93■□□□□ 0.3
Tpm1-216ENSMUST00000113707 Dync2h1Q45VK7 4306 aa16.92■□□□□ 0.3
Tpm1-216ENSMUST00000113707 Gm17577J3QNF7 156 aa16.92■□□□□ 0.3
Tpm1-216ENSMUST00000113707 CnbpP53996 178 aaKnown RBP16.91■□□□□ 0.3
Tpm1-216ENSMUST00000113707 Trav13n-2A0A0G2JF93 110 aa16.9■□□□□ 0.3
Tpm1-216ENSMUST00000113707 Dnah7bL7N1Y0 4068 aa16.89■□□□□ 0.29
Tpm1-216ENSMUST00000113707 Rpl18aP62717 176 aaKnown RBP16.88■□□□□ 0.29
Tpm1-216ENSMUST00000113707 MrapQ9D159 127 aa16.88■□□□□ 0.29
Tpm1-216ENSMUST00000113707 Trav3-4A0A075B654 114 aa16.86■□□□□ 0.29
Tpm1-216ENSMUST00000113707 1700020N15RikL7MTX3 112 aa16.86■□□□□ 0.29
Tpm1-216ENSMUST00000113707 Defa16P50714 93 aa16.86■□□□□ 0.29
Tpm1-216ENSMUST00000113707 Igkv1-35A0A0G2JDE5 120 aa16.86■□□□□ 0.29
Tpm1-216ENSMUST00000113707 4930524J08RikQ9CUJ5 163 aa16.86■□□□□ 0.29
Tpm1-216ENSMUST00000113707 Igkv3-12A0A140T8P0 119 aa16.85■□□□□ 0.29
Tpm1-216ENSMUST00000113707 Acyp1P56376 99 aa16.84■□□□□ 0.29
Tpm1-216ENSMUST00000113707 Defa20Q45VN2 95 aa16.84■□□□□ 0.29
Tpm1-216ENSMUST00000113707 Sprr1aQ62266 144 aa16.84■□□□□ 0.29
Tpm1-216ENSMUST00000113707 Gm9805F6YK59 57 aa16.84■□□□□ 0.29
Tpm1-216ENSMUST00000113707 Mrpl52Q9D0Y8 121 aa16.84■□□□□ 0.29
Tpm1-216ENSMUST00000113707 Gm10251J3QPM5 127 aa16.81■□□□□ 0.28
Tpm1-216ENSMUST00000113707 Gm10767Q3TQP0 103 aa16.81■□□□□ 0.28
Tpm1-216ENSMUST00000113707 Cdk2ap2Q9CPY4 127 aa16.81■□□□□ 0.28
Tpm1-216ENSMUST00000113707 FcgbpE9Q0B5 2583 aa16.8■□□□□ 0.28
Tpm1-216ENSMUST00000113707 Gm11627A6PWP4 55 aa16.8■□□□□ 0.28
Tpm1-216ENSMUST00000113707 Gm10735Q3US96 136 aa16.8■□□□□ 0.28
Tpm1-216ENSMUST00000113707 4930519P11RikQ9CUJ8 166 aa16.8■□□□□ 0.28
Tpm1-216ENSMUST00000113707 Csmd3Q80T79 3707 aa16.8■□□□□ 0.28
Tpm1-216ENSMUST00000113707 Rpl39lQ9CQD0 51 aa16.79■□□□□ 0.28
Tpm1-216ENSMUST00000113707 Defa1P11477 93 aa16.78■□□□□ 0.28
Tpm1-216ENSMUST00000113707 BaalcQ8VHV1 145 aa16.78■□□□□ 0.28
Tpm1-216ENSMUST00000113707 Gm10770F7D043 238 aa16.78■□□□□ 0.28
Tpm1-216ENSMUST00000113707 BB014433Q8C5R5 389 aa16.78■□□□□ 0.28
Tpm1-216ENSMUST00000113707 TeppQ6IMH0 216 aa16.77■□□□□ 0.27
Tpm1-216ENSMUST00000113707 Xlr5cQ9JJR2 179 aa16.77■□□□□ 0.27
Tpm1-216ENSMUST00000113707 Igkv1-88A0A140T8N1 120 aa16.76■□□□□ 0.27
Tpm1-216ENSMUST00000113707 BC048502Q80Y74 154 aa16.76■□□□□ 0.27
Tpm1-216ENSMUST00000113707 Spata45Q9CVW4 97 aa16.76■□□□□ 0.27
Tpm1-216ENSMUST00000113707 Klk12B2RVZ0 247 aa16.75■□□□□ 0.27
Tpm1-216ENSMUST00000113707 Stab2Q8R4U0 2559 aa16.75■□□□□ 0.27
Tpm1-216ENSMUST00000113707 Ighv10-1A0A0B4J1J6 119 aa16.73■□□□□ 0.27
Tpm1-216ENSMUST00000113707 5730596B20RikQ8BQ08 205 aa16.72■□□□□ 0.27
Tpm1-216ENSMUST00000113707 2310034G01RikA0A286YDL3 209 aa16.71■□□□□ 0.27
Tpm1-216ENSMUST00000113707 Trav3-1Q5R1I8 114 aa16.69■□□□□ 0.26
Tpm1-216ENSMUST00000113707 Pou2af1Q64693 256 aa16.69■□□□□ 0.26
Tpm1-216ENSMUST00000113707 Defb40Q70KL2 73 aa16.69■□□□□ 0.26
Tpm1-216ENSMUST00000113707 Pkd1l1Q8R526 2615 aa16.68■□□□□ 0.26
Tpm1-216ENSMUST00000113707 Gm10320E9PW43 113 aa16.67■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 106.8 ms