RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Sfta2E9PXB6 77 aa9.38□□□□□ -0.91
Clcn3-204ENSMUST00000110301 AI854703Q8BIN3 203 aa9.38□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Igkv2-109A0A075B5K6 120 aa9.38□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Ighv8-5A0A0A6YY60 119 aa9.38□□□□□ -0.91
Clcn3-204ENSMUST00000110301 4930546C10RikE9Q4Y3 121 aa9.38□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Gm7138L7N2C3 230 aa9.38□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Pglyrp4Q0VB07 374 aa9.38□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Dph3Q8K0W9 82 aa9.38□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Gm3238W4VSP7 230 aa9.38□□□□□ -0.91
Clcn3-204ENSMUST00000110301 3110070M22RikQ9DAQ7 118 aa9.37□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Tfpi2O35536 230 aa9.37□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Cdip1Q9DB75 208 aa9.37□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Ube2bP63147 152 aa9.37□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Tenm3Q9WTS6 2715 aa9.37□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Gm7137J3QMW1 236 aa9.36□□□□□ -0.91
Clcn3-204ENSMUST00000110301 U90926O08546 118 aa9.36□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Ighv8-11A0A075B5X4 119 aa9.36□□□□□ -0.91
Clcn3-204ENSMUST00000110301 PscaP57096 123 aa9.36□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Fam19a5Q91WE9 132 aa9.36□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Spink13Q3UTS8 97 aa9.36□□□□□ -0.91
Clcn3-204ENSMUST00000110301 1700012A03RikQ9DAF1 130 aa9.36□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Ighv1-61P01749 117 aa9.35□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Ntn5Q3UQ22 452 aa9.35□□□□□ -0.91
Clcn3-204ENSMUST00000110301 4930432M17RikQ3V0W9 174 aa9.34□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Brk1Q91VR8 75 aa9.34□□□□□ -0.91
Clcn3-204ENSMUST00000110301 MplkipQ9D011 178 aa9.34□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Hist1h4aP62806 103 aaKnown RBP9.34□□□□□ -0.91
Clcn3-204ENSMUST00000110301 Apoc4Q61268 124 aa9.33□□□□□ -0.92
Clcn3-204ENSMUST00000110301 A0A286YE02 88 aa9.33□□□□□ -0.92
Clcn3-204ENSMUST00000110301 Xcl1P47993 114 aa9.33□□□□□ -0.92
Clcn3-204ENSMUST00000110301 Timm17bQ9Z0V7 172 aa9.33□□□□□ -0.92
Clcn3-204ENSMUST00000110301 Gm9887F6RFI0 207 aa9.33□□□□□ -0.92
Clcn3-204ENSMUST00000110301 CrygaP04345 174 aa9.33□□□□□ -0.92
Clcn3-204ENSMUST00000110301 Odf3l2Q3TZ65 277 aa9.33□□□□□ -0.92
Clcn3-204ENSMUST00000110301 Trav14d-3-dv8A0A075B619 120 aa9.32□□□□□ -0.92
Clcn3-204ENSMUST00000110301 Ighv8-13A0A075B5Y0 101 aa9.31□□□□□ -0.92
Clcn3-204ENSMUST00000110301 9430015G10RikA2ASP7 199 aa9.31□□□□□ -0.92
Clcn3-204ENSMUST00000110301 Defa21Q8C1P2 93 aa9.3□□□□□ -0.92
Clcn3-204ENSMUST00000110301 Igkv4-92A0A0B4J1I2 117 aa9.29□□□□□ -0.92
Clcn3-204ENSMUST00000110301 Rpl39lQ9CQD0 51 aa9.29□□□□□ -0.92
Clcn3-204ENSMUST00000110301 Igkv8-18A0A0B4J1J3 123 aa9.29□□□□□ -0.92
Clcn3-204ENSMUST00000110301 Spata3Q9D9T6 193 aa9.28□□□□□ -0.92
Clcn3-204ENSMUST00000110301 Ighv2-9-1A0A075B697 116 aa9.28□□□□□ -0.92
Clcn3-204ENSMUST00000110301 Tmem213Q08EA8 116 aa9.28□□□□□ -0.92
Clcn3-204ENSMUST00000110301 Tenm4Q3UHK6 2771 aa9.28□□□□□ -0.92
Clcn3-204ENSMUST00000110301 Gm16485Q8C4B7 115 aa9.27□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Fgf23Q9EPC2 251 aa9.27□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Fam19a1Q7TPG8 133 aa9.26□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Zfhx3Q61329 3726 aa9.26□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Pet100P0DJE0 76 aa9.26□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Nupr2Q497P3 102 aa9.26□□□□□ -0.93
Clcn3-204ENSMUST00000110301 MobpQ9D2P8 170 aa9.26□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Vpreb1P13372 142 aa9.26□□□□□ -0.93
Clcn3-204ENSMUST00000110301 CenpwQ3URR0 86 aa9.26□□□□□ -0.93
Clcn3-204ENSMUST00000110301 NpwA0A1L1STR8 176 aa9.26□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Zfand2aQ9JII7 171 aa9.25□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Gm10577Q3UDV9 132 aa9.25□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Gm10772F7AIG4 85 aa9.25□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Igkv8-26A0A075B5N5 123 aa9.24□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Atp5eP56382 52 aa9.24□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Stab2Q8R4U0 2559 aa9.24□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Gm9805F6YK59 57 aa9.24□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Ighv2-9A0A075B5Q5 116 aa9.23□□□□□ -0.93
Clcn3-204ENSMUST00000110301 SmcpP15265 143 aa9.23□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Wfdc17Q5SSJ1 76 aa9.23□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Wdr38Q9D994 303 aa9.23□□□□□ -0.93
Clcn3-204ENSMUST00000110301 B9d2Q3UK10 175 aa9.23□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Gm43218A0A0G2JGT0 114 aa9.22□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Gm16181B0V2H2 73 aa9.22□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Ly6g6cQ9Z1Q4 126 aa9.22□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Klk9Q32M27 251 aa9.22□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Sox16Q62247 57 aa9.21□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Ubl5Q9EPV8 73 aa9.21□□□□□ -0.93
Clcn3-204ENSMUST00000110301 Igkv4-58A0A0G2JGI6 119 aa9.21□□□□□ -0.94
Clcn3-204ENSMUST00000110301 HrnrQ8VHD8 2496 aa9.2□□□□□ -0.94
Clcn3-204ENSMUST00000110301 Pdzd2E9Q1M1 2796 aa9.2□□□□□ -0.94
Clcn3-204ENSMUST00000110301 ScxQ64124 207 aa9.2□□□□□ -0.94
Clcn3-204ENSMUST00000110301 Obox2E9PXV9 151 aa9.19□□□□□ -0.94
Clcn3-204ENSMUST00000110301 Naa38Q9D2U5 125 aa9.19□□□□□ -0.94
Clcn3-204ENSMUST00000110301 Tmem243B2RVB9 118 aa9.18□□□□□ -0.94
Clcn3-204ENSMUST00000110301 Acyp1P56376 99 aa9.18□□□□□ -0.94
Clcn3-204ENSMUST00000110301 SycnQ8VCK7 134 aa9.17□□□□□ -0.94
Clcn3-204ENSMUST00000110301 Ube2d4D3YUH6 135 aa9.17□□□□□ -0.94
Clcn3-204ENSMUST00000110301 Snhg11Q4G0K9 87 aa9.17□□□□□ -0.94
Clcn3-204ENSMUST00000110301 Defb45Q3V490 66 aa9.17□□□□□ -0.94
Clcn3-204ENSMUST00000110301 Tcl1b3P56842 122 aa9.16□□□□□ -0.94
Clcn3-204ENSMUST00000110301 Gm10135F6TEE5 83 aa9.16□□□□□ -0.94
Clcn3-204ENSMUST00000110301 H2al1aQ5M8Q2 105 aa9.16□□□□□ -0.94
Clcn3-204ENSMUST00000110301 Svep1A2AVA0 3567 aa9.16□□□□□ -0.94
Clcn3-204ENSMUST00000110301 Gm36176A0A1W2P8D5 158 aa9.16□□□□□ -0.94
Clcn3-204ENSMUST00000110301 Sostdc1Q9CQN4 206 aa9.16□□□□□ -0.94
Clcn3-204ENSMUST00000110301 Ube2aQ9Z255 152 aa9.16□□□□□ -0.94
Clcn3-204ENSMUST00000110301 Trav14-1A0A0G2JF94 121 aa9.15□□□□□ -0.94
Clcn3-204ENSMUST00000110301 4930556J24RikQ9D4U7 146 aa9.15□□□□□ -0.94
Clcn3-204ENSMUST00000110301 Bean1Q9EQG5 255 aa9.15□□□□□ -0.94
Clcn3-204ENSMUST00000110301 Gm5142Q8C5X9 133 aa9.15□□□□□ -0.95
Clcn3-204ENSMUST00000110301 Igkv1-117A0A140T8M0 119 aa9.14□□□□□ -0.95
Clcn3-204ENSMUST00000110301 Inafm2A0A1L1STD6 152 aa9.13□□□□□ -0.95
Clcn3-204ENSMUST00000110301 4930535I16RikQ9CUI2 172 aa9.13□□□□□ -0.95
Clcn3-204ENSMUST00000110301 E130208F15RikQ3UPV3 143 aa9.13□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 59.2 ms