RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Dppa2Q9CWH0 301 aa15.41■□□□□ 0.06
Cln6-201ENSMUST00000034776 Gm9903Q8C9Y8 129 aa15.41■□□□□ 0.06
Cln6-201ENSMUST00000034776 Trav13-2A0A075B649 110 aa15.38■□□□□ 0.05
Cln6-201ENSMUST00000034776 Gm5617Q91VN2 117 aa15.38■□□□□ 0.05
Cln6-201ENSMUST00000034776 Q9DAQ5 155 aa15.38■□□□□ 0.05
Cln6-201ENSMUST00000034776 4930556J24RikQ9D4U7 146 aa15.37■□□□□ 0.05
Cln6-201ENSMUST00000034776 2310009B15RikA0A0A6YWI4 143 aa15.37■□□□□ 0.05
Cln6-201ENSMUST00000034776 MifP34884 115 aaKnown RBP15.37■□□□□ 0.05
Cln6-201ENSMUST00000034776 Igkv8-18A0A0B4J1J3 123 aa15.35■□□□□ 0.05
Cln6-201ENSMUST00000034776 Csdc2Q91YQ3 154 aa15.34■□□□□ 0.05
Cln6-201ENSMUST00000034776 Dnah1E9Q8T7 4250 aa15.33■□□□□ 0.04
Cln6-201ENSMUST00000034776 Igkv8-16A0A0G2JDG9 121 aa15.32■□□□□ 0.04
Cln6-201ENSMUST00000034776 Gm3618D3Z4P5 127 aa15.32■□□□□ 0.04
Cln6-201ENSMUST00000034776 Gm2916Q9D9B9 127 aa15.32■□□□□ 0.04
Cln6-201ENSMUST00000034776 Gm5153P01627 120 aa15.32■□□□□ 0.04
Cln6-201ENSMUST00000034776 Gm17509Q9CZ61 145 aa15.32■□□□□ 0.04
Cln6-201ENSMUST00000034776 Gm10518F6UQQ9 182 aa15.31■□□□□ 0.04
Cln6-201ENSMUST00000034776 B9d2Q3UK10 175 aa15.31■□□□□ 0.04
Cln6-201ENSMUST00000034776 Defb29Q8BGW9 78 aa15.31■□□□□ 0.04
Cln6-201ENSMUST00000034776 Wfdc12Q9JHY3 85 aa15.31■□□□□ 0.04
Cln6-201ENSMUST00000034776 Gm12057A0A087WR21 115 aa15.31■□□□□ 0.04
Cln6-201ENSMUST00000034776 Gm10845Q3UNY9 185 aa15.3■□□□□ 0.04
Cln6-201ENSMUST00000034776 Sigmar1O55242 223 aa15.29■□□□□ 0.04
Cln6-201ENSMUST00000034776 Cox7b2Q9D2H1 82 aa15.29■□□□□ 0.04
Cln6-201ENSMUST00000034776 AW011738F6S7Q2 159 aa15.29■□□□□ 0.04
Cln6-201ENSMUST00000034776 P01819 144 aa15.28■□□□□ 0.04
Cln6-201ENSMUST00000034776 Cox7bP56393 80 aa15.28■□□□□ 0.04
Cln6-201ENSMUST00000034776 Dnah7bL7N1Y0 4068 aa15.28■□□□□ 0.04
Cln6-201ENSMUST00000034776 Gm28269A0A087WSG3 125 aa15.28■□□□□ 0.04
Cln6-201ENSMUST00000034776 Igkv4-92A0A0B4J1I2 117 aa15.28■□□□□ 0.04
Cln6-201ENSMUST00000034776 Gm16381A0A1Y7VKT9 73 aa15.28■□□□□ 0.04
Cln6-201ENSMUST00000034776 Smim26Q3V460 107 aa15.28■□□□□ 0.04
Cln6-201ENSMUST00000034776 Gm5142Q8C5X9 133 aa15.28■□□□□ 0.04
Cln6-201ENSMUST00000034776 Ube2wQ8VDW4 151 aa15.28■□□□□ 0.04
Cln6-201ENSMUST00000034776 9430015G10RikA2ASP7 199 aa15.27■□□□□ 0.04
Cln6-201ENSMUST00000034776 Trav3-1Q5R1I8 114 aa15.26■□□□□ 0.03
Cln6-201ENSMUST00000034776 Cdip1Q9DB75 208 aa15.26■□□□□ 0.03
Cln6-201ENSMUST00000034776 A730009L09RikA0A1B0GS82 72 aa15.25■□□□□ 0.03
Cln6-201ENSMUST00000034776 Insl3O09107 122 aa15.25■□□□□ 0.03
Cln6-201ENSMUST00000034776 Dnal4Q9DCM4 105 aa15.25■□□□□ 0.03
Cln6-201ENSMUST00000034776 Reg3dQ9QUS9 175 aa15.25■□□□□ 0.03
Cln6-201ENSMUST00000034776 CnbpP53996 178 aaKnown RBP15.25■□□□□ 0.03
Cln6-201ENSMUST00000034776 4930524J08RikQ9CUJ5 163 aa15.25■□□□□ 0.03
Cln6-201ENSMUST00000034776 Trav13n-2A0A0G2JF93 110 aa15.24■□□□□ 0.03
Cln6-201ENSMUST00000034776 Cox8cA6H666 72 aa15.24■□□□□ 0.03
Cln6-201ENSMUST00000034776 Ube2d4D3YUH6 135 aa15.24■□□□□ 0.03
Cln6-201ENSMUST00000034776 1700020N15RikL7MTX3 112 aa15.24■□□□□ 0.03
Cln6-201ENSMUST00000034776 Gm10767Q3TQP0 103 aa15.24■□□□□ 0.03
Cln6-201ENSMUST00000034776 Sprr4Q8CGN8 76 aa15.23■□□□□ 0.03
Cln6-201ENSMUST00000034776 Gm16485Q8C4B7 115 aa15.23■□□□□ 0.03
Cln6-201ENSMUST00000034776 Igkv1-35A0A0G2JDE5 120 aa15.22■□□□□ 0.03
Cln6-201ENSMUST00000034776 TeppQ6IMH0 216 aa15.22■□□□□ 0.03
Cln6-201ENSMUST00000034776 Hbb-b2P02089 147 aa15.2■□□□□ 0.02
Cln6-201ENSMUST00000034776 Acyp1P56376 99 aa15.2■□□□□ 0.02
Cln6-201ENSMUST00000034776 Ufsp1Q9CZP0 217 aa15.2■□□□□ 0.02
Cln6-201ENSMUST00000034776 AY074887Q8R5F9 132 aa15.2■□□□□ 0.02
Cln6-201ENSMUST00000034776 Trav3-4A0A075B654 114 aa15.19■□□□□ 0.02
Cln6-201ENSMUST00000034776 Cby1Q9D1C2 127 aa15.17■□□□□ 0.02
Cln6-201ENSMUST00000034776 Gm4707V9GXN5 68 aa15.17■□□□□ 0.02
Cln6-201ENSMUST00000034776 A0A286YCN5 57 aa15.16■□□□□ 0.02
Cln6-201ENSMUST00000034776 Gm17349F7BGH6 99 aa15.16■□□□□ 0.02
Cln6-201ENSMUST00000034776 Camk2n2Q78WH7 79 aa15.16■□□□□ 0.02
Cln6-201ENSMUST00000034776 LbhQ9CX60 105 aa15.16■□□□□ 0.02
Cln6-201ENSMUST00000034776 Xlr5cQ9JJR2 179 aa15.16■□□□□ 0.02
Cln6-201ENSMUST00000034776 BatfO35284 125 aa15.16■□□□□ 0.02
Cln6-201ENSMUST00000034776 Trav14-1A0A0G2JF94 121 aa15.15■□□□□ 0.02
Cln6-201ENSMUST00000034776 5730596B20RikQ8BQ08 205 aa15.15■□□□□ 0.02
Cln6-201ENSMUST00000034776 Rpl18aP62717 176 aaKnown RBP15.14■□□□□ 0.01
Cln6-201ENSMUST00000034776 Dync2h1Q45VK7 4306 aa15.13■□□□□ 0.01
Cln6-201ENSMUST00000034776 Csmd3Q80T79 3707 aa15.13■□□□□ 0.01
Cln6-201ENSMUST00000034776 Gm9805F6YK59 57 aa15.11■□□□□ 0.01
Cln6-201ENSMUST00000034776 Rpl39lQ9CQD0 51 aa15.11■□□□□ 0.01
Cln6-201ENSMUST00000034776 Huwe1Q7TMY8 4377 aaKnown RBP15.1■□□□□ 0.01
Cln6-201ENSMUST00000034776 Gm10770F7D043 238 aa15.1■□□□□ 0.01
Cln6-201ENSMUST00000034776 Gm17577J3QNF7 156 aa15.1■□□□□ 0.01
Cln6-201ENSMUST00000034776 Mrpl52Q9D0Y8 121 aa15.1■□□□□ 0.01
Cln6-201ENSMUST00000034776 2310061N02RikQ9D6S9 174 aa15.09■□□□□ 0.01
Cln6-201ENSMUST00000034776 Defa20Q45VN2 95 aa15.08■□□□□ 0
Cln6-201ENSMUST00000034776 Gm9508A0A1W2P7W0 230 aa15.07■□□□□ 0
Cln6-201ENSMUST00000034776 Klk12B2RVZ0 247 aa15.07■□□□□ 0
Cln6-201ENSMUST00000034776 Gm10320E9PW43 113 aa15.07■□□□□ 0
Cln6-201ENSMUST00000034776 Znf414Q9DCK4 299 aa15.06■□□□□ 0
Cln6-201ENSMUST00000034776 1810062G17RikG3X8Y2 129 aa15.05■□□□□ 0
Cln6-201ENSMUST00000034776 Sprr1aQ62266 144 aa15.04■□□□□ -0
Cln6-201ENSMUST00000034776 Defa16P50714 93 aa15.04■□□□□ -0
Cln6-201ENSMUST00000034776 Ighv10-1A0A0B4J1J6 119 aa15.02■□□□□ -0
Cln6-201ENSMUST00000034776 Igkv4-58A0A0G2JGI6 119 aa15.01□□□□□ -0.01
Cln6-201ENSMUST00000034776 2310034G01RikA0A286YDL3 209 aa15.01□□□□□ -0.01
Cln6-201ENSMUST00000034776 Igkv1-88A0A140T8N1 120 aa15□□□□□ -0.01
Cln6-201ENSMUST00000034776 Spata45Q9CVW4 97 aa14.99□□□□□ -0.01
Cln6-201ENSMUST00000034776 Megf8P60882 2789 aa14.99□□□□□ -0.01
Cln6-201ENSMUST00000034776 Cdk2ap2Q9CPY4 127 aa14.98□□□□□ -0.01
Cln6-201ENSMUST00000034776 Igkv3-12A0A140T8P0 119 aa14.98□□□□□ -0.01
Cln6-201ENSMUST00000034776 BB014433Q8C5R5 389 aa14.98□□□□□ -0.01
Cln6-201ENSMUST00000034776 Lyrm7Q9DA03 104 aa14.98□□□□□ -0.01
Cln6-201ENSMUST00000034776 Ifitm6A0A1B0GS75 124 aa14.97□□□□□ -0.01
Cln6-201ENSMUST00000034776 Gm11627A6PWP4 55 aa14.97□□□□□ -0.01
Cln6-201ENSMUST00000034776 Xcl1P47993 114 aa14.97□□□□□ -0.01
Cln6-201ENSMUST00000034776 BC048502Q80Y74 154 aa14.96□□□□□ -0.01
Cln6-201ENSMUST00000034776 Stab2Q8R4U0 2559 aa14.95□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 66.9 ms