RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Igkv8-24A0A140T8P5 121 aa10.23□□□□□ -0.77
Nkx3-1-201ENSMUST00000022646 Gm10518F6UQQ9 182 aa10.23□□□□□ -0.77
Nkx3-1-201ENSMUST00000022646 Igkv8-16A0A0G2JDG9 121 aa10.22□□□□□ -0.77
Nkx3-1-201ENSMUST00000022646 BB014433Q8C5R5 389 aa10.22□□□□□ -0.77
Nkx3-1-201ENSMUST00000022646 Ifitm6A0A1B0GS75 124 aa10.22□□□□□ -0.77
Nkx3-1-201ENSMUST00000022646 Klk12B2RVZ0 247 aa10.21□□□□□ -0.77
Nkx3-1-201ENSMUST00000022646 Gm10845Q3UNY9 185 aa10.21□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 Gm10735Q3US96 136 aa10.2□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 Igkv2-109A0A075B5K6 120 aa10.19□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 Ighv8-11A0A075B5X4 119 aa10.19□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 P01819 144 aa10.19□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 Reg3dQ9QUS9 175 aa10.19□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 PolqQ8CGS6 2544 aa10.19□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 Igkv3-1A0A075B5P1 119 aa10.18□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 4930519P11RikQ9CUJ8 166 aa10.18□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 4930556J24RikQ9D4U7 146 aa10.18□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 Itpr2Q9Z329 2701 aa10.18□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 Gm28539A0A087WSL9 92 aa10.18□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 Defa20Q45VN2 95 aa10.18□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 Csdc2Q91YQ3 154 aa10.18□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 Ighv8-13A0A075B5Y0 101 aa10.18□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 Igf1P05017 153 aa10.17□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 Cox7bP56393 80 aa10.17□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 EnhoQ8K1D8 76 aa10.17□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 AtrQ9JKK8 2635 aa10.16□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 Gm10320E9PW43 113 aa10.16□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 PkigO70139 76 aa10.16□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 Defa16P50714 93 aa10.16□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 CnbpP53996 178 aaKnown RBP10.16□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 Tcl1b5P56845 121 aa10.15□□□□□ -0.78
Nkx3-1-201ENSMUST00000022646 Ighv2-9A0A075B5Q5 116 aa10.14□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 Igkv4-58A0A0G2JGI6 119 aa10.14□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 Gm11213A0A1B0GR83 88 aa10.14□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 Rpl18aP62717 176 aaKnown RBP10.14□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 Apoc4Q61268 124 aa10.13□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 Gm9805F6YK59 57 aa10.13□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 Gm9903Q8C9Y8 129 aa10.13□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 Ighv13-2A0A0A6YWN3 119 aa10.12□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 Defa25Q5G864 92 aa10.12□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 Q9DAA7 145 aa10.12□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 Notch2O35516 2470 aa10.12□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 Snhg11Q4G0K9 87 aa10.11□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 Ube2d4D3YUH6 135 aa10.11□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 ApcQ61315 2845 aa10.1□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 Igkv8-34A0A0G2JDU0 121 aa10.1□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 Ighv10-3A0A075B5T6 119 aa10.09□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 A0A286YCN5 57 aa10.09□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 4930535I16RikQ9CUI2 172 aa10.09□□□□□ -0.79
Nkx3-1-201ENSMUST00000022646 E130218I03RikA0A0U1RNU5 63 aa10.08□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Smim20D3Z7Q2 69 aa10.08□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 AY074887Q8R5F9 132 aa10.08□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Ighv10-1A0A0B4J1J6 119 aa10.08□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Ntn5Q3UQ22 452 aa10.08□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 D130052B06RikQ3UW13 202 aa10.07□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Reg3bP35230 175 aa10.06□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Gm17509Q9CZ61 145 aa10.06□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Ufsp1Q9CZP0 217 aa10.06□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Igkv8-26A0A075B5N5 123 aa10.06□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Gm7138L7N2C3 230 aa10.06□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Hist1h4aP62806 103 aaKnown RBP10.06□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Gm3238W4VSP7 230 aa10.06□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Stab1Q8R4Y4 2571 aa10.06□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Igkv8-27A0A0G2JF28 120 aa10.06□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Igkv8-30A0A140T8M3 121 aa10.06□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 E130208F15RikQ3UPV3 143 aa10.06□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 A730009L09RikA0A1B0GS82 72 aa10.05□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 E130114P18RikF6S0S7 154 aa10.05□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 SmcpP15265 143 aa10.05□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Gm10770F7D043 238 aa10.05□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Cox7b2Q9D2H1 82 aa10.05□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Hivep1Q03172 2688 aa10.05□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Tmem254aP0DN89 123 aa10.04□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Tmem254bP0DN90 123 aa10.04□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Tmem254cP0DN91 123 aa10.04□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Phxr5P08399 672 aa10.04□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Cystm1Q8K353 104 aa10.04□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Mrpl52Q9D0Y8 121 aa10.04□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Ormdl1Q921I0 153 aa10.04□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Igkv4-92A0A0B4J1I2 117 aa10.03□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 9430015G10RikA2ASP7 199 aa10.03□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 7530416G11RikJ3QJX6 159 aa10.03□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Msrb1Q9JLC3 116 aa10.03□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Igkv1-88A0A140T8N1 120 aa10.03□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Lamtor3O88653 124 aa10.02□□□□□ -0.8
Nkx3-1-201ENSMUST00000022646 Defa2P28309 93 aa10.02□□□□□ -0.81
Nkx3-1-201ENSMUST00000022646 Igkv8-21A0A140T8P7 120 aa10.02□□□□□ -0.81
Nkx3-1-201ENSMUST00000022646 Srrm2Q8BTI8 2703 aaKnown RBP10.01□□□□□ -0.81
Nkx3-1-201ENSMUST00000022646 2310034G01RikA0A286YDL3 209 aa10.01□□□□□ -0.81
Nkx3-1-201ENSMUST00000022646 Gm17577J3QNF7 156 aa10.01□□□□□ -0.81
Nkx3-1-201ENSMUST00000022646 Notch1Q01705 2531 aa10.01□□□□□ -0.81
Nkx3-1-201ENSMUST00000022646 Gm10308Q9CVR5 141 aa10□□□□□ -0.81
Nkx3-1-201ENSMUST00000022646 MplkipQ9D011 178 aa9.99□□□□□ -0.81
Nkx3-1-201ENSMUST00000022646 Camk2n2Q78WH7 79 aa9.99□□□□□ -0.81
Nkx3-1-201ENSMUST00000022646 9530003J23RikQ8BM26 151 aa9.98□□□□□ -0.81
Nkx3-1-201ENSMUST00000022646 Gm20726G3UX18 150 aa9.98□□□□□ -0.81
Nkx3-1-201ENSMUST00000022646 Ubl5Q9EPV8 73 aa9.98□□□□□ -0.81
Nkx3-1-201ENSMUST00000022646 Kmt2aP55200 3966 aa9.97□□□□□ -0.81
Nkx3-1-201ENSMUST00000022646 Defa7P50705 93 aa9.96□□□□□ -0.81
Nkx3-1-201ENSMUST00000022646 Cdk2ap2Q9CPY4 127 aa9.96□□□□□ -0.81
Nkx3-1-201ENSMUST00000022646 Gm3618D3Z4P5 127 aa9.96□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms