RNA–Protein interactions for RNA: ENSMUST00000018810.9

Cbx1-201, Transcript of Chromobox protein homolog 1, mousemouse

TSL 1 (best) BASIC

Gene Cbx1, Length 1,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx1-201ENSMUST00000018810 MalO09198 153 aa12.16□□□□□ -0.46
Cbx1-201ENSMUST00000018810 Defb47Q30KN1 79 aa12.15□□□□□ -0.46
Cbx1-201ENSMUST00000018810 Phpt1Q9DAK9 124 aa12.15□□□□□ -0.46
Cbx1-201ENSMUST00000018810 Gm867A0A1W2P7T4 151 aa12.14□□□□□ -0.47
Cbx1-201ENSMUST00000018810 Gm9507D3Z5T3 223 aa12.14□□□□□ -0.47
Cbx1-201ENSMUST00000018810 P01896 185 aa12.14□□□□□ -0.47
Cbx1-201ENSMUST00000018810 Gm16485Q8C4B7 115 aa12.14□□□□□ -0.47
Cbx1-201ENSMUST00000018810 Gm10549Q3URY4 149 aa12.14□□□□□ -0.47
Cbx1-201ENSMUST00000018810 Cox6cQ9CPQ1 76 aa12.14□□□□□ -0.47
Cbx1-201ENSMUST00000018810 Wdr38Q9D994 303 aa12.14□□□□□ -0.47
Cbx1-201ENSMUST00000018810 Pfn2Q9JJV2 140 aa12.14□□□□□ -0.47
Cbx1-201ENSMUST00000018810 Ly6hQ9WUC3 139 aa12.14□□□□□ -0.47
Cbx1-201ENSMUST00000018810 Tcl1b5P56845 121 aa12.13□□□□□ -0.47
Cbx1-201ENSMUST00000018810 Gm29423A0A087WRM1 55 aa12.12□□□□□ -0.47
Cbx1-201ENSMUST00000018810 B230359F08RikA0A0B4J1K3 109 aa12.12□□□□□ -0.47
Cbx1-201ENSMUST00000018810 Gm5617Q91VN2 117 aa12.12□□□□□ -0.47
Cbx1-201ENSMUST00000018810 Tcl1b3P56842 122 aa12.11□□□□□ -0.47
Cbx1-201ENSMUST00000018810 Gm9918Q8BUR5 174 aa12.11□□□□□ -0.47
Cbx1-201ENSMUST00000018810 Ighv1-56A0A0A6YXG2 117 aa12.1□□□□□ -0.47
Cbx1-201ENSMUST00000018810 CenpwQ3URR0 86 aa12.1□□□□□ -0.47
Cbx1-201ENSMUST00000018810 Fras1Q80T14 4010 aa12.1□□□□□ -0.47
Cbx1-201ENSMUST00000018810 SelenowP63300 88 aa12.09□□□□□ -0.47
Cbx1-201ENSMUST00000018810 Igkv8-24A0A140T8P5 121 aa12.09□□□□□ -0.47
Cbx1-201ENSMUST00000018810 Ndufa12Q7TMF3 145 aaKnown RBP12.08□□□□□ -0.48
Cbx1-201ENSMUST00000018810 Ighv2-9A0A075B5Q5 116 aa12.07□□□□□ -0.48
Cbx1-201ENSMUST00000018810 Gm10135F6TEE5 83 aa12.07□□□□□ -0.48
Cbx1-201ENSMUST00000018810 Fam240bJ3QMB3 78 aa12.07□□□□□ -0.48
Cbx1-201ENSMUST00000018810 Eif4ebp3Q80VV3 101 aa12.07□□□□□ -0.48
Cbx1-201ENSMUST00000018810 Dppa2Q9CWH0 301 aa12.07□□□□□ -0.48
Cbx1-201ENSMUST00000018810 Gm9903Q8C9Y8 129 aa12.05□□□□□ -0.48
Cbx1-201ENSMUST00000018810 C530025M09RikF6RGA8 229 aa12.03□□□□□ -0.48
Cbx1-201ENSMUST00000018810 Rpl28P41105 137 aaKnown RBP12.03□□□□□ -0.48
Cbx1-201ENSMUST00000018810 Lgals4Q8K419 326 aa12.03□□□□□ -0.48
Cbx1-201ENSMUST00000018810 Ly6g6cQ9Z1Q4 126 aa12.03□□□□□ -0.48
Cbx1-201ENSMUST00000018810 Gm28269A0A087WSG3 125 aa12.02□□□□□ -0.48
Cbx1-201ENSMUST00000018810 4930556J24RikQ9D4U7 146 aa12.02□□□□□ -0.48
Cbx1-201ENSMUST00000018810 Cox7b2Q9D2H1 82 aa12.02□□□□□ -0.49
Cbx1-201ENSMUST00000018810 Hrct1Q9D6B9 109 aa12.01□□□□□ -0.49
Cbx1-201ENSMUST00000018810 PlecQ9QXS1 4691 aaKnown RBP12.01□□□□□ -0.49
Cbx1-201ENSMUST00000018810 Igkv1-117A0A140T8M0 119 aa12□□□□□ -0.49
Cbx1-201ENSMUST00000018810 2310009B15RikA0A0A6YWI4 143 aa12□□□□□ -0.49
Cbx1-201ENSMUST00000018810 Pglyrp4Q0VB07 374 aa12□□□□□ -0.49
Cbx1-201ENSMUST00000018810 Dnal4Q9DCM4 105 aa12□□□□□ -0.49
Cbx1-201ENSMUST00000018810 Igkv8-16A0A0G2JDG9 121 aa11.99□□□□□ -0.49
Cbx1-201ENSMUST00000018810 Smim26Q3V460 107 aa11.99□□□□□ -0.49
Cbx1-201ENSMUST00000018810 Igkv8-18A0A0B4J1J3 123 aa11.98□□□□□ -0.49
Cbx1-201ENSMUST00000018810 Trav13-2A0A075B649 110 aa11.97□□□□□ -0.49
Cbx1-201ENSMUST00000018810 Igkv4-92A0A0B4J1I2 117 aa11.97□□□□□ -0.49
Cbx1-201ENSMUST00000018810 Gm16381A0A1Y7VKT9 73 aa11.97□□□□□ -0.49
Cbx1-201ENSMUST00000018810 9430015G10RikA2ASP7 199 aa11.97□□□□□ -0.49
Cbx1-201ENSMUST00000018810 2310050C09RikG5E8Z3 280 aa11.97□□□□□ -0.49
Cbx1-201ENSMUST00000018810 Csdc2Q91YQ3 154 aa11.97□□□□□ -0.49
Cbx1-201ENSMUST00000018810 Cox8cA6H666 72 aa11.96□□□□□ -0.49
Cbx1-201ENSMUST00000018810 Gm10518F6UQQ9 182 aa11.96□□□□□ -0.49
Cbx1-201ENSMUST00000018810 Ociad2Q9D8W7 154 aa11.96□□□□□ -0.49
Cbx1-201ENSMUST00000018810 A730009L09RikA0A1B0GS82 72 aa11.95□□□□□ -0.5
Cbx1-201ENSMUST00000018810 OxtP35454 125 aa11.95□□□□□ -0.5
Cbx1-201ENSMUST00000018810 TgO08710 2766 aa11.95□□□□□ -0.5
Cbx1-201ENSMUST00000018810 Cox7bP56393 80 aa11.95□□□□□ -0.5
Cbx1-201ENSMUST00000018810 Ube2wQ8VDW4 151 aa11.95□□□□□ -0.5
Cbx1-201ENSMUST00000018810 Gm5153P01627 120 aa11.94□□□□□ -0.5
Cbx1-201ENSMUST00000018810 Hbb-b2P02089 147 aa11.94□□□□□ -0.5
Cbx1-201ENSMUST00000018810 MifP34884 115 aaKnown RBP11.94□□□□□ -0.5
Cbx1-201ENSMUST00000018810 CnbpP53996 178 aaKnown RBP11.94□□□□□ -0.5
Cbx1-201ENSMUST00000018810 Sprr4Q8CGN8 76 aa11.94□□□□□ -0.5
Cbx1-201ENSMUST00000018810 Reg3dQ9QUS9 175 aa11.94□□□□□ -0.5
Cbx1-201ENSMUST00000018810 Igkv3-12A0A140T8P0 119 aa11.93□□□□□ -0.5
Cbx1-201ENSMUST00000018810 BaalcQ8VHV1 145 aa11.93□□□□□ -0.5
Cbx1-201ENSMUST00000018810 P01819 144 aa11.93□□□□□ -0.5
Cbx1-201ENSMUST00000018810 Defa16P50714 93 aa11.93□□□□□ -0.5
Cbx1-201ENSMUST00000018810 Nupr2Q497P3 102 aa11.91□□□□□ -0.5
Cbx1-201ENSMUST00000018810 Camk2n2Q78WH7 79 aa11.91□□□□□ -0.5
Cbx1-201ENSMUST00000018810 Defa1P11477 93 aa11.9□□□□□ -0.5
Cbx1-201ENSMUST00000018810 Defb29Q8BGW9 78 aa11.9□□□□□ -0.5
Cbx1-201ENSMUST00000018810 Ube2d4D3YUH6 135 aa11.9□□□□□ -0.5
Cbx1-201ENSMUST00000018810 Defb40Q70KL2 73 aa11.9□□□□□ -0.5
Cbx1-201ENSMUST00000018810 Wfdc12Q9JHY3 85 aa11.9□□□□□ -0.5
Cbx1-201ENSMUST00000018810 Xlr5cQ9JJR2 179 aa11.9□□□□□ -0.5
Cbx1-201ENSMUST00000018810 1700020N15RikL7MTX3 112 aa11.89□□□□□ -0.51
Cbx1-201ENSMUST00000018810 Acyp1P56376 99 aa11.89□□□□□ -0.51
Cbx1-201ENSMUST00000018810 Trav3-1Q5R1I8 114 aa11.88□□□□□ -0.51
Cbx1-201ENSMUST00000018810 Ufsp1Q9CZP0 217 aa11.88□□□□□ -0.51
Cbx1-201ENSMUST00000018810 Trav3-4A0A075B654 114 aa11.87□□□□□ -0.51
Cbx1-201ENSMUST00000018810 Trav14-1A0A0G2JF94 121 aa11.87□□□□□ -0.51
Cbx1-201ENSMUST00000018810 Gm5142Q8C5X9 133 aa11.87□□□□□ -0.51
Cbx1-201ENSMUST00000018810 4930519P11RikQ9CUJ8 166 aa11.87□□□□□ -0.51
Cbx1-201ENSMUST00000018810 Gm10767Q3TQP0 103 aa11.86□□□□□ -0.51
Cbx1-201ENSMUST00000018810 Gm10845Q3UNY9 185 aa11.86□□□□□ -0.51
Cbx1-201ENSMUST00000018810 Sprr1aQ62266 144 aa11.86□□□□□ -0.51
Cbx1-201ENSMUST00000018810 Gm10735Q3US96 136 aa11.85□□□□□ -0.51
Cbx1-201ENSMUST00000018810 4930524J08RikQ9CUJ5 163 aa11.85□□□□□ -0.51
Cbx1-201ENSMUST00000018810 Gm17577J3QNF7 156 aa11.84□□□□□ -0.51
Cbx1-201ENSMUST00000018810 Dnah7aE9Q0T8 4024 aa11.83□□□□□ -0.52
Cbx1-201ENSMUST00000018810 Dnah9B1AR51 4484 aa11.83□□□□□ -0.52
Cbx1-201ENSMUST00000018810 Igkv1-35A0A0G2JDE5 120 aa11.83□□□□□ -0.52
Cbx1-201ENSMUST00000018810 Trav13n-2A0A0G2JF93 110 aa11.83□□□□□ -0.52
Cbx1-201ENSMUST00000018810 AY074887Q8R5F9 132 aa11.83□□□□□ -0.52
Cbx1-201ENSMUST00000018810 A0A286YCN5 57 aa11.82□□□□□ -0.52
Cbx1-201ENSMUST00000018810 U90926O08546 118 aa11.82□□□□□ -0.52
Cbx1-201ENSMUST00000018810 Sigmar1O55242 223 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms