RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 SvipQ3UZP4 77 aa12.77□□□□□ -0.37
Shkbp1-201ENSMUST00000003857 Dad1P61804 113 aa12.76□□□□□ -0.37
Shkbp1-201ENSMUST00000003857 Defa25Q5G864 92 aa12.76□□□□□ -0.37
Shkbp1-201ENSMUST00000003857 Setd2E9Q5F9 2537 aa12.76□□□□□ -0.37
Shkbp1-201ENSMUST00000003857 CnbpP53996 178 aaKnown RBP12.76□□□□□ -0.37
Shkbp1-201ENSMUST00000003857 Ntn5Q3UQ22 452 aa12.76□□□□□ -0.37
Shkbp1-201ENSMUST00000003857 Myo18bE9PV66 2605 aa12.74□□□□□ -0.37
Shkbp1-201ENSMUST00000003857 4930556J24RikQ9D4U7 146 aa12.73□□□□□ -0.37
Shkbp1-201ENSMUST00000003857 Ighv2-9A0A075B5Q5 116 aa12.73□□□□□ -0.37
Shkbp1-201ENSMUST00000003857 Krtap11-1E9Q2E9 183 aa12.73□□□□□ -0.37
Shkbp1-201ENSMUST00000003857 Cox7bP56393 80 aa12.73□□□□□ -0.37
Shkbp1-201ENSMUST00000003857 Tcl1b5P56845 121 aa12.72□□□□□ -0.37
Shkbp1-201ENSMUST00000003857 Gm3233E9Q2H5 230 aa12.72□□□□□ -0.37
Shkbp1-201ENSMUST00000003857 Q9DAA7 145 aa12.72□□□□□ -0.37
Shkbp1-201ENSMUST00000003857 Klk12B2RVZ0 247 aa12.71□□□□□ -0.37
Shkbp1-201ENSMUST00000003857 Gm10518F6UQQ9 182 aa12.71□□□□□ -0.37
Shkbp1-201ENSMUST00000003857 Higd2aQ9CQJ1 106 aa12.71□□□□□ -0.37
Shkbp1-201ENSMUST00000003857 Igkv2-109A0A075B5K6 120 aa12.71□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 Gm10320E9PW43 113 aa12.71□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 Gm9903Q8C9Y8 129 aa12.7□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 Ighv10-3A0A075B5T6 119 aa12.7□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 Klk11Q9QYN3 276 aa12.7□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 Igkv8-16A0A0G2JDG9 121 aa12.69□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 Wfdc12Q9JHY3 85 aa12.69□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 Hivep3A2A884 2348 aa12.69□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 Igkv8-24A0A140T8P5 121 aa12.69□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 7530416G11RikJ3QJX6 159 aa12.69□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 A830031A19RikQ8BNT5 113 aa12.69□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 Rpl18aP62717 176 aaKnown RBP12.67□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 Cystm1Q8K353 104 aa12.66□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 Reg3dQ9QUS9 175 aa12.66□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 Tmem254aP0DN89 123 aa12.65□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 Tmem254bP0DN90 123 aa12.65□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 Tmem254cP0DN91 123 aa12.65□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 ScxQ64124 207 aa12.65□□□□□ -0.38
Shkbp1-201ENSMUST00000003857 Gm9805F6YK59 57 aa12.64□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 E130208F15RikQ3UPV3 143 aa12.64□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Ighv8-13A0A075B5Y0 101 aa12.64□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Gm11213A0A1B0GR83 88 aa12.64□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 D130052B06RikQ3UW13 202 aa12.63□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Igkv4-58A0A0G2JGI6 119 aa12.63□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 EnhoQ8K1D8 76 aa12.63□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Gm10308Q9CVR5 141 aa12.63□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Igkv8-27A0A0G2JF28 120 aa12.62□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Igkv8-30A0A140T8M3 121 aa12.62□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Defa2P28309 93 aa12.62□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Igkv8-26A0A075B5N5 123 aa12.62□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Ighv10-1A0A0B4J1J6 119 aa12.62□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Ube2d4D3YUH6 135 aa12.61□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Ormdl1Q921I0 153 aa12.61□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Mrpl52Q9D0Y8 121 aa12.61□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Tex15F8VPN2 2785 aa12.61□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Igkv8-21A0A140T8P7 120 aa12.61□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 CicQ924A2 2510 aa12.6□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Igkv3-1A0A075B5P1 119 aa12.6□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Gm10770F7D043 238 aa12.6□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Nbeal2Q6ZQA0 2742 aa12.59□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 AY074887Q8R5F9 132 aa12.59□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 4930535I16RikQ9CUI2 172 aa12.59□□□□□ -0.39
Shkbp1-201ENSMUST00000003857 Gm3618D3Z4P5 127 aa12.58□□□□□ -0.4
Shkbp1-201ENSMUST00000003857 Gm2916Q9D9B9 127 aa12.58□□□□□ -0.4
Shkbp1-201ENSMUST00000003857 Defa20Q45VN2 95 aa12.57□□□□□ -0.4
Shkbp1-201ENSMUST00000003857 Tenm4Q3UHK6 2771 aa12.57□□□□□ -0.4
Shkbp1-201ENSMUST00000003857 Scgb1b2O35176 93 aa12.56□□□□□ -0.4
Shkbp1-201ENSMUST00000003857 Serp2Q6TAW2 65 aa12.56□□□□□ -0.4
Shkbp1-201ENSMUST00000003857 Inafm2A0A1L1STD6 152 aa12.55□□□□□ -0.4
Shkbp1-201ENSMUST00000003857 Gm17509Q9CZ61 145 aa12.55□□□□□ -0.4
Shkbp1-201ENSMUST00000003857 Gm20726G3UX18 150 aa12.55□□□□□ -0.4
Shkbp1-201ENSMUST00000003857 Msrb1Q9JLC3 116 aa12.54□□□□□ -0.4
Shkbp1-201ENSMUST00000003857 Fbn1Q61554 2873 aaKnown RBP12.53□□□□□ -0.4
Shkbp1-201ENSMUST00000003857 Snhg11Q4G0K9 87 aa12.53□□□□□ -0.4
Shkbp1-201ENSMUST00000003857 Igkv4-92A0A0B4J1I2 117 aa12.52□□□□□ -0.4
Shkbp1-201ENSMUST00000003857 Ighv2-5A0A0A6YY69 116 aa12.52□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 Ubl5Q9EPV8 73 aa12.52□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 E130218I03RikA0A0U1RNU5 63 aa12.51□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 Fam19a1Q7TPG8 133 aa12.51□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 Lamtor3O88653 124 aa12.51□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 Defa7P50705 93 aa12.51□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 2310034G01RikA0A286YDL3 209 aa12.5□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 4930518I15RikQ3V2W7 57 aa12.5□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 Naa38Q9D2U5 125 aa12.5□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 Ighv13-2A0A0A6YWN3 119 aa12.5□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 9430015G10RikA2ASP7 199 aa12.5□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 9530003J23RikQ8BM26 151 aa12.5□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 Ufsp1Q9CZP0 217 aa12.49□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 Cox7b2Q9D2H1 82 aa12.49□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 Tenm1Q9WTS4 2731 aa12.49□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 A730009L09RikA0A1B0GS82 72 aa12.48□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 A0A286YCN5 57 aa12.47□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 MplkipQ9D011 178 aa12.47□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 PolqQ8CGS6 2544 aa12.47□□□□□ -0.41
Shkbp1-201ENSMUST00000003857 Igkv8-34A0A0G2JDU0 121 aa12.45□□□□□ -0.42
Shkbp1-201ENSMUST00000003857 Tmem243B2RVB9 118 aa12.45□□□□□ -0.42
Shkbp1-201ENSMUST00000003857 A730071L15RikQ8C4X0 137 aa12.45□□□□□ -0.42
Shkbp1-201ENSMUST00000003857 E130114P18RikF6S0S7 154 aa12.44□□□□□ -0.42
Shkbp1-201ENSMUST00000003857 Gm17577J3QNF7 156 aa12.44□□□□□ -0.42
Shkbp1-201ENSMUST00000003857 Defa21Q8C1P2 93 aa12.44□□□□□ -0.42
Shkbp1-201ENSMUST00000003857 Elof1P60003 83 aa12.43□□□□□ -0.42
Shkbp1-201ENSMUST00000003857 Igkv1-88A0A140T8N1 120 aa12.42□□□□□ -0.42
Shkbp1-201ENSMUST00000003857 Rbm3O89086 153 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 107.4 ms