RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Gm10542F6XDR3 90 aa6.46□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Tomm7Q9D173 55 aa6.46□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Ighv1-11A0A0A6YWI9 117 aa6.45□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Ighv1-61P01749 117 aa6.45□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Ighv2-7A0A075B5Q8 116 aa6.45□□□□□ -1.38
Col28a1-201ENSMUST00000115537 9430015G10RikA2ASP7 199 aa6.45□□□□□ -1.38
Col28a1-201ENSMUST00000115537 P01786 117 aa6.45□□□□□ -1.38
Col28a1-201ENSMUST00000115537 7530416G11RikJ3QJX6 159 aa6.45□□□□□ -1.38
Col28a1-201ENSMUST00000115537 E130218I03RikA0A0U1RNU5 63 aa6.45□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Prp2P05143 317 aa6.45□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Psmb11Q8BG41 302 aa6.45□□□□□ -1.38
Col28a1-201ENSMUST00000115537 LhbO09108 141 aa6.44□□□□□ -1.38
Col28a1-201ENSMUST00000115537 H2al1aQ5M8Q2 105 aa6.44□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Odf1Q61999 247 aa6.44□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Pou2af1Q64693 256 aa6.44□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Ighv5-9-1A0A0A6YVS4 126 aa6.44□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Igkv4-68A0A0B4J1I7 117 aa6.44□□□□□ -1.38
Col28a1-201ENSMUST00000115537 P01823 113 aa6.44□□□□□ -1.38
Col28a1-201ENSMUST00000115537 4930535I16RikQ9CUI2 172 aa6.44□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Ighv13-2A0A0A6YWN3 119 aa6.43□□□□□ -1.38
Col28a1-201ENSMUST00000115537 9230102O04RikA2ASX7 82 aa6.43□□□□□ -1.38
Col28a1-201ENSMUST00000115537 EnhoQ8K1D8 76 aa6.43□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Fxyd5P97808 178 aa6.43□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Gm10226O88253 85 aa6.43□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Synj2bpQ9D6K5 145 aa6.43□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Trav13n-2A0A0G2JF93 110 aa6.42□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Inafm2A0A1L1STD6 152 aa6.42□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Gm10300Q8C8P7 189 aa6.42□□□□□ -1.38
Col28a1-201ENSMUST00000115537 4930524J08RikQ9CUJ5 163 aa6.42□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Vpreb2P13373 142 aa6.42□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Gm815Q3UWS2 115 aa6.42□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Cox17P56394 63 aa6.42□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Dad1P61804 113 aa6.42□□□□□ -1.38
Col28a1-201ENSMUST00000115537 FshbQ60687 130 aa6.42□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Trank1Q8BV79 2999 aa6.41□□□□□ -1.38
Col28a1-201ENSMUST00000115537 P01738 130 aa6.41□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Ighv1-72P01751 139 aa6.41□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Defb12Q8K4N3 78 aa6.41□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Cdk2ap2Q9CPY4 127 aa6.41□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Ormdl1Q921I0 153 aa6.41□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Tmem223Q9CQE2 199 aaKnown RBP6.41□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Q9DAB9 146 aa6.41□□□□□ -1.38
Col28a1-201ENSMUST00000115537 SnurfQ9WU12 71 aa6.41□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Lyrm9Q3UN90 78 aa6.4□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Gm9887F6RFI0 207 aa6.4□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Ly6c2P0CW03 131 aa6.4□□□□□ -1.38
Col28a1-201ENSMUST00000115537 Sfta2E9PXB6 77 aa6.4□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Chd9Q8BYH8 2885 aa6.4□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Igkv2-109A0A075B5K6 120 aa6.39□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Ighv2-3A0A075B696 115 aa6.39□□□□□ -1.39
Col28a1-201ENSMUST00000115537 A0A286YE02 88 aa6.39□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Vmo1Q5SXG7 201 aa6.39□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Eif4ebp3Q80VV3 101 aa6.39□□□□□ -1.39
Col28a1-201ENSMUST00000115537 1810032O08RikE9PZV8 113 aa6.39□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Igkv1-99F6XWB2 120 aa6.39□□□□□ -1.39
Col28a1-201ENSMUST00000115537 3110070M22RikQ9DAQ7 118 aa6.39□□□□□ -1.39
Col28a1-201ENSMUST00000115537 1700011M02RikB1AX35 88 aa6.39□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Serp1Q9Z1W5 66 aa6.39□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Ighv1-62-1A0A075B5U3 116 aa6.39□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Gm8439G3UWA7 96 aa6.39□□□□□ -1.39
Col28a1-201ENSMUST00000115537 CrygeQ03740 174 aa6.39□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Gm10577Q3UDV9 132 aa6.39□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Tm2d2Q8R0I4 213 aa6.38□□□□□ -1.39
Col28a1-201ENSMUST00000115537 P06329 120 aa6.38□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Trav9n-2A0A0G2JDP3 113 aa6.38□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Igkv4-61A0A0G2JH00 117 aa6.38□□□□□ -1.39
Col28a1-201ENSMUST00000115537 4930564D02RikQ9D4S4 103 aa6.38□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Trav13-4-dv7A0A075B6C2 110 aa6.37□□□□□ -1.39
Col28a1-201ENSMUST00000115537 B230359F08RikA0A0B4J1K3 109 aa6.37□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Gm10322F7D7I4 111 aa6.37□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Gm9747Q810H1 104 aa6.37□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Nop10Q9CQS2 64 aa6.37□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Lelp1Q9DAE3 120 aa6.37□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Trav13-1A0A075B644 110 aa6.36□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Rpl28P41105 137 aaKnown RBP6.36□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Ppp1r32Q148A4 427 aa6.36□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Fam19a1Q7TPG8 133 aa6.36□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Znf580Q9DB38 172 aa6.36□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Rpl39lQ9CQD0 51 aa6.36□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Gm10647E9Q8X0 124 aa6.36□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Igkv3-1A0A075B5P1 119 aa6.36□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Igkv4-72A0A0B4J1I4 117 aa6.36□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Igkv4-54A0A0G2JES9 117 aa6.36□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Gm3233E9Q2H5 230 aa6.36□□□□□ -1.39
Col28a1-201ENSMUST00000115537 E130114P18RikF6S0S7 154 aa6.36□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Igkv4-78A0A0A6YYE5 119 aa6.35□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Tenm4Q3UHK6 2771 aa6.35□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Gm37389A0A0A6YW05 95 aa6.35□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Krtap16-1A2A5X5 502 aa6.35□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Ube2d4D3YUH6 135 aa6.35□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Ndufc1Q9CQY9 76 aa6.35□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Tex15F8VPN2 2785 aa6.35□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Igkv8-34A0A0G2JDU0 121 aa6.34□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Dph3Q8K0W9 82 aa6.34□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Sostdc1Q9CQN4 206 aa6.34□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Igkv8-16A0A0G2JDG9 121 aa6.34□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Krtap27-1E9PX37 202 aa6.34□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Bri3P28662 125 aa6.34□□□□□ -1.39
Col28a1-201ENSMUST00000115537 4930470P17RikQ9D542 155 aa6.34□□□□□ -1.39
Col28a1-201ENSMUST00000115537 Igkv4-69A0A0B4J1I6 116 aa6.34□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms