RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Gm20773A0A0A6YXW2 232 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm20807A0A0A6YXX7 232 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Scgb2a2J3KMP9 96 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm20873J3QMQ9 232 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm20795J3QP49 232 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm21310J3QQ23 232 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Ndufa1O35683 70 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Sem1P60897 70 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Tppp2Q0P5Y3 170 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm21440Q3TTD8 232 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 4930474N05RikQ8BVR5 218 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm9903Q8C9Y8 129 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Psmb2Q9R1P3 201 aa2.54□□□□□ -2
Hmgb1-203ENSMUST00000110505 Trav7n-4A0A075B620 113 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 Trav7-4A0A075B6C1 113 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 Zfp951A0A087WRH0 451 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 NbdyA0A0N4SUI7 68 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 Esp4A8R0T8 117 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm4744D3Z3S5 154 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm5478D3Z6R0 159 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm12169F2Z474 250 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 Ccl1P10146 92 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 Defa3P28310 93 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 Smim15Q3UTD9 74 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 Trav7d-4Q5R1H9 113 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 Sprr1aQ62266 144 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 Crct1Q6PAI5 102 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 Camk2n2Q78WH7 79 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm9944Q8C559 102 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 Q9CQT9 129 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 Iah1Q9DB29 249 aa2.53□□□□□ -2
Hmgb1-203ENSMUST00000110505 Gm5157A0A087WRH8 301 aa2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Trav11A0A0B4J1J9 114 aa2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 A730009L09RikA0A1B0GS82 72 aa2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Tmem238A9JSM3 176 aa2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Gm17669F6QL70 154 aa2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Gm6176J3QK59 301 aa2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 P01823 113 aa2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 PipP02816 146 aa2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Phf5aP83870 110 aaKnown RBP2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Gm4567Q3UTA8 301 aa2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 D130052B06RikQ3UW13 202 aa2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Atp6v1g3Q8BMC1 118 aa2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Yipf6Q8BR70 236 aa2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 B930094E09RikQ8C4T2 136 aa2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Uqcr10Q8R1I1 64 aa2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Vmn1r226Q8R2A8 298 aa2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Cml1Q9JIZ0 222 aa2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Gm14214V9GX35 225 aa2.52□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Gm28230A0A0A0MQ91 144 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Igkv3-7A0A0G2JE31 119 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 A0A286YCN5 57 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Defa7P50705 93 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 RhebQ921J2 184 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Gtsf1lQ9CWD0 151 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 GgctQ9D7X8 188 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Ctnnbip1Q9JJN6 81 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Calm4Q9JM83 148 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Gm17472A0A075B683 117 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Gm45785A0A1B0GT05 94 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 DdtO35215 118 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Ssty1P13675 232 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Lgals1P16045 135 aaKnown RBP2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Evi2aP20934 223 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Odf3bQ5M8M2 238 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Fam19a4Q7TPG5 135 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Fam168bQ80XQ8 194 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 SpinklQ8CEK3 90 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Srp19Q9D7A6 144 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Snai3Q9QY31 287 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Timm10bQ9WV96 100 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Atoh7Q9Z2E5 149 aa2.51□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Tcrg-C2A0A075B5Z2 167 aa2.5□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Gm45783A0A1B0GT48 74 aa2.5□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Gm11444F6QMA6 170 aa2.5□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Gm28305F6U473 122 aa2.5□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 P01853 167 aa2.5□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 GhrhP16043 103 aa2.5□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 P18527 97 aa2.5□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Znf664Q4VA44 261 aa2.5□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Slc17a2Q5SZA1 478 aa2.5□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Gins1Q9CZ15 196 aa2.5□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Zfand2aQ9JII7 171 aa2.5□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Cml5Q9QXS8 227 aa2.5□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Ighv8-2A0A0A6YW58 119 aa2.49□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Ighv2-5A0A0A6YY69 116 aa2.49□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Olfr869E9PX82 323 aa2.49□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Esp34G3UXG0 151 aa2.49□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Vmn1r14H3BJ46 303 aa2.49□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Gm21874J3QNZ6 232 aa2.49□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Sigmar1O55242 223 aa2.49□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Ighv1-72P01751 139 aa2.49□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 P06334 169 aa2.49□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Defa13P50711 93 aa2.49□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Rps20P60867 119 aaKnown RBP2.49□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 SeboxP70368 190 aa2.49□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Shisal1Q0VBP7 198 aa2.49□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Crebl2Q32M00 123 aa2.49□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Gm10642Q3TWM1 71 aa2.49□□□□□ -2.01
Hmgb1-203ENSMUST00000110505 Psors1c2Q80ZC9 134 aa2.49□□□□□ -2.01
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms