RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Odf3l2Q3TZ65 277 aa8.38□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Rif1Q6PR54 2419 aaKnown RBP8.38□□□□□ -1.07
Pcif1-201ENSMUST00000041643 CdsnQ7TPC1 561 aa8.38□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Gm10577Q3UDV9 132 aa8.38□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Ccdc179J3QM76 67 aa8.38□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Ormdl1Q921I0 153 aa8.37□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Spata3Q9D9T6 193 aa8.37□□□□□ -1.07
Pcif1-201ENSMUST00000041643 BC025920Q3US60 128 aa8.37□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Krtap26-1Q9D7N2 215 aa8.37□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Gm16485Q8C4B7 115 aa8.37□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Defa27F2Z403 93 aa8.37□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Wfdc10Q3V2J9 124 aa8.37□□□□□ -1.07
Pcif1-201ENSMUST00000041643 NpwA0A1L1STR8 176 aa8.37□□□□□ -1.07
Pcif1-201ENSMUST00000041643 BtcQ05928 177 aa8.36□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Q9DAQ5 155 aa8.36□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Abca2P41234 2434 aa8.36□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Ube2d4D3YUH6 135 aa8.35□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Tcl1b5P56845 121 aa8.35□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Zfp292Q9Z2U2 2698 aa8.35□□□□□ -1.07
Pcif1-201ENSMUST00000041643 A830005F24RikQ8BRT5 167 aa8.35□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Pde6gP09174 87 aa8.35□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Crip2Q9DCT8 208 aaKnown RBP8.35□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Trav14-1A0A0G2JF94 121 aa8.34□□□□□ -1.07
Pcif1-201ENSMUST00000041643 Notch3Q61982 2318 aa8.33□□□□□ -1.08
Pcif1-201ENSMUST00000041643 Ighv2-9A0A075B5Q5 116 aa8.33□□□□□ -1.08
Pcif1-201ENSMUST00000041643 Gm11011D3Z3L9 86 aa8.33□□□□□ -1.08
Pcif1-201ENSMUST00000041643 Pet100P0DJE0 76 aa8.33□□□□□ -1.08
Pcif1-201ENSMUST00000041643 4930432M17RikQ3V0W9 174 aa8.33□□□□□ -1.08
Pcif1-201ENSMUST00000041643 Klk9Q32M27 251 aa8.33□□□□□ -1.08
Pcif1-201ENSMUST00000041643 5730596B20RikQ8BQ08 205 aa8.33□□□□□ -1.08
Pcif1-201ENSMUST00000041643 Defb11Q8R2I7 77 aa8.33□□□□□ -1.08
Pcif1-201ENSMUST00000041643 4930556J24RikQ9D4U7 146 aa8.33□□□□□ -1.08
Pcif1-201ENSMUST00000041643 Gm17509Q9CZ61 145 aa8.33□□□□□ -1.08
Pcif1-201ENSMUST00000041643 TrrapQ80YV3 2565 aaKnown RBP8.33□□□□□ -1.08
Pcif1-201ENSMUST00000041643 Cox7bP56393 80 aa8.32□□□□□ -1.08
Pcif1-201ENSMUST00000041643 Gm43218A0A0G2JGT0 114 aa8.31□□□□□ -1.08
Pcif1-201ENSMUST00000041643 Rpl28P41105 137 aaKnown RBP8.31□□□□□ -1.08
Pcif1-201ENSMUST00000041643 BikO70337 150 aa8.31□□□□□ -1.08
Pcif1-201ENSMUST00000041643 Q8K1L6 76 aa8.3□□□□□ -1.08
Pcif1-201ENSMUST00000041643 Gm20726G3UX18 150 aa8.3□□□□□ -1.08
Pcif1-201ENSMUST00000041643 Lelp1Q9DAE3 120 aa8.3□□□□□ -1.08
Pcif1-201ENSMUST00000041643 Gm16181B0V2H2 73 aa8.29□□□□□ -1.08
Pcif1-201ENSMUST00000041643 BaalcQ8VHV1 145 aa8.29□□□□□ -1.08
Pcif1-201ENSMUST00000041643 Arhgap32Q811P8 2089 aa8.28□□□□□ -1.08
Pcif1-201ENSMUST00000041643 Zfand2aQ9JII7 171 aa8.27□□□□□ -1.08
Pcif1-201ENSMUST00000041643 Gm11565A2A4M7 156 aa8.27□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Tmem254aP0DN89 123 aa8.27□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Tmem254bP0DN90 123 aa8.27□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Tmem254cP0DN91 123 aa8.27□□□□□ -1.09
Pcif1-201ENSMUST00000041643 1600014C23RikQ9DAX4 101 aa8.27□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Col12a1Q60847 3120 aa8.27□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Igkv8-21A0A140T8P7 120 aa8.27□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Usp9xP70398 2559 aaKnown RBP8.27□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Tnrc18Q80WC3 2878 aa8.27□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Gm3233E9Q2H5 230 aa8.27□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Wfdc13Q5DQQ6 81 aa8.26□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Nav3Q80TN7 2359 aa8.26□□□□□ -1.09
Pcif1-201ENSMUST00000041643 ScxQ64124 207 aa8.26□□□□□ -1.09
Pcif1-201ENSMUST00000041643 CrygaP04345 174 aa8.25□□□□□ -1.09
Pcif1-201ENSMUST00000041643 4930535I16RikQ9CUI2 172 aa8.25□□□□□ -1.09
Pcif1-201ENSMUST00000041643 TroQ6DIC6 2087 aa8.25□□□□□ -1.09
Pcif1-201ENSMUST00000041643 3110070M22RikQ9DAQ7 118 aa8.25□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Ighv10-3A0A075B5T6 119 aa8.25□□□□□ -1.09
Pcif1-201ENSMUST00000041643 9530003J23RikQ8BM26 151 aa8.25□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Gm28374F6SG70 93 aa8.24□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Gm5153P01627 120 aa8.24□□□□□ -1.09
Pcif1-201ENSMUST00000041643 GhrhP16043 103 aa8.24□□□□□ -1.09
Pcif1-201ENSMUST00000041643 TeppQ6IMH0 216 aa8.24□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Znf706Q9D115 76 aaKnown RBP8.24□□□□□ -1.09
Pcif1-201ENSMUST00000041643 2310009B15RikA0A0A6YWI4 143 aa8.24□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Gm5142Q8C5X9 133 aa8.24□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Igkv3-3A0A140T8Q0 119 aa8.24□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Mki67E9PVX6 3177 aaKnown RBP8.24□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Adm2Q7TNK8 150 aa8.23□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Cdh23Q99PF4 3354 aa8.23□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Bahcc1Q3UHR0 2643 aa8.23□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Hivep2Q3UHF7 2430 aa8.23□□□□□ -1.09
Pcif1-201ENSMUST00000041643 E130208F15RikQ3UPV3 143 aa8.23□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Naa38Q9D2U5 125 aa8.23□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Prr15lQ8JZM2 100 aa8.22□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Defb40Q70KL2 73 aa8.22□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Atp5eP56382 52 aa8.22□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Igkv1-117A0A140T8M0 119 aa8.22□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Igf1P05017 153 aa8.22□□□□□ -1.09
Pcif1-201ENSMUST00000041643 Snhg11Q4G0K9 87 aa8.22□□□□□ -1.09
Pcif1-201ENSMUST00000041643 A730009L09RikA0A1B0GS82 72 aa8.21□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Gm9887F6RFI0 207 aa8.21□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Chd7A2AJK6 2986 aaKnown RBP8.2□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Vpreb3D3Z6J4 130 aa8.2□□□□□ -1.1
Pcif1-201ENSMUST00000041643 1810062G17RikG3X8Y2 129 aa8.2□□□□□ -1.1
Pcif1-201ENSMUST00000041643 EnhoQ8K1D8 76 aa8.2□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Rev3lQ61493 3122 aa8.2□□□□□ -1.1
Pcif1-201ENSMUST00000041643 MobpQ9D2P8 170 aa8.2□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Prune2Q52KR3 3084 aa8.19□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Abca12E9Q876 2595 aa8.19□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Ntn5Q3UQ22 452 aa8.19□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Wdr38Q9D994 303 aa8.19□□□□□ -1.1
Pcif1-201ENSMUST00000041643 Defb12Q8K4N3 78 aa8.18□□□□□ -1.1
Pcif1-201ENSMUST00000041643 4930524J08RikQ9CUJ5 163 aa8.18□□□□□ -1.1
Pcif1-201ENSMUST00000041643 C2cd3Q52KB6 2323 aa8.18□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 94.3 ms