RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Ighv2-3A0A075B696 115 aa8.01□□□□□ -1.13
Ciita-201ENSMUST00000023147 Gm11011D3Z3L9 86 aa8.01□□□□□ -1.13
Ciita-201ENSMUST00000023147 CenpwQ3URR0 86 aa8.01□□□□□ -1.13
Ciita-201ENSMUST00000023147 Defb40Q70KL2 73 aa8.01□□□□□ -1.13
Ciita-201ENSMUST00000023147 Gm1968Q3T9I3 115 aa8□□□□□ -1.13
Ciita-201ENSMUST00000023147 Shisa2Q8QZV2 295 aa8□□□□□ -1.13
Ciita-201ENSMUST00000023147 ScxQ64124 207 aa8□□□□□ -1.13
Ciita-201ENSMUST00000023147 Flg2Q2VIS4 2362 aa7.99□□□□□ -1.13
Ciita-201ENSMUST00000023147 Lmo4P61969 165 aa7.99□□□□□ -1.13
Ciita-201ENSMUST00000023147 1700056E22RikF7CNM6 234 aa7.99□□□□□ -1.13
Ciita-201ENSMUST00000023147 FcorP0DJI6 106 aa7.99□□□□□ -1.13
Ciita-201ENSMUST00000023147 Polr2kQ63871 58 aa7.99□□□□□ -1.13
Ciita-201ENSMUST00000023147 Chchd7Q8K2Q5 85 aa7.99□□□□□ -1.13
Ciita-201ENSMUST00000023147 Ly6hQ9WUC3 139 aa7.99□□□□□ -1.13
Ciita-201ENSMUST00000023147 C130032M10RikQ8C888 123 aa7.99□□□□□ -1.13
Ciita-201ENSMUST00000023147 Wdr38Q9D994 303 aa7.99□□□□□ -1.13
Ciita-201ENSMUST00000023147 Cd27P41272 250 aa7.98□□□□□ -1.13
Ciita-201ENSMUST00000023147 NrgnP60761 78 aa7.98□□□□□ -1.13
Ciita-201ENSMUST00000023147 E130116L18RikQ8BMV6 101 aa7.97□□□□□ -1.13
Ciita-201ENSMUST00000023147 Myo9aQ8C170 2542 aa7.96□□□□□ -1.13
Ciita-201ENSMUST00000023147 Igkv8-19A0A0G2JFN8 121 aa7.96□□□□□ -1.13
Ciita-201ENSMUST00000023147 Rtl10D3YWW5 146 aa7.96□□□□□ -1.14
Ciita-201ENSMUST00000023147 Wfdc13Q5DQQ6 81 aa7.95□□□□□ -1.14
Ciita-201ENSMUST00000023147 A0A286YCN5 57 aa7.95□□□□□ -1.14
Ciita-201ENSMUST00000023147 Gm16223Q8CBM3 117 aa7.94□□□□□ -1.14
Ciita-201ENSMUST00000023147 Gm10577Q3UDV9 132 aa7.94□□□□□ -1.14
Ciita-201ENSMUST00000023147 Q9DAB9 146 aa7.94□□□□□ -1.14
Ciita-201ENSMUST00000023147 Gm10322F7D7I4 111 aa7.94□□□□□ -1.14
Ciita-201ENSMUST00000023147 1520401A03RikA0A0J9YVH6 598 aa7.93□□□□□ -1.14
Ciita-201ENSMUST00000023147 4930535I16RikQ9CUI2 172 aa7.93□□□□□ -1.14
Ciita-201ENSMUST00000023147 SrarpQ3ULG3 163 aa7.92□□□□□ -1.14
Ciita-201ENSMUST00000023147 Lce6aD3YV94 81 aa7.92□□□□□ -1.14
Ciita-201ENSMUST00000023147 Gm10267M0QWD8 85 aa7.92□□□□□ -1.14
Ciita-201ENSMUST00000023147 Sprr2jO70561 109 aa7.92□□□□□ -1.14
Ciita-201ENSMUST00000023147 Gm26566Q8CAC1 153 aa7.91□□□□□ -1.14
Ciita-201ENSMUST00000023147 Ighv2-9-1A0A075B697 116 aa7.91□□□□□ -1.14
Ciita-201ENSMUST00000023147 Pla2g2cP48076 150 aa7.91□□□□□ -1.14
Ciita-201ENSMUST00000023147 Wfdc17Q5SSJ1 76 aa7.91□□□□□ -1.14
Ciita-201ENSMUST00000023147 Ankhd1E9PUR0 2548 aaKnown RBP7.91□□□□□ -1.14
Ciita-201ENSMUST00000023147 Gm10226O88253 85 aa7.9□□□□□ -1.14
Ciita-201ENSMUST00000023147 Wfdc3Q14AE4 130 aa7.9□□□□□ -1.14
Ciita-201ENSMUST00000023147 Spink13Q3UTS8 97 aa7.9□□□□□ -1.14
Ciita-201ENSMUST00000023147 PrlhG3UWC3 86 aa7.9□□□□□ -1.14
Ciita-201ENSMUST00000023147 SbsponQ3UPR9 264 aa7.9□□□□□ -1.14
Ciita-201ENSMUST00000023147 Wfdc12Q9JHY3 85 aa7.9□□□□□ -1.14
Ciita-201ENSMUST00000023147 Ly6g6cQ9Z1Q4 126 aa7.9□□□□□ -1.14
Ciita-201ENSMUST00000023147 Ep400Q8CHI8 3072 aaKnown RBP7.9□□□□□ -1.15
Ciita-201ENSMUST00000023147 Gm17606F6ZL36 78 aa7.89□□□□□ -1.15
Ciita-201ENSMUST00000023147 Defb38Q7TNV7 63 aa7.89□□□□□ -1.15
Ciita-201ENSMUST00000023147 Cyyr1Q8VIH7 165 aa7.89□□□□□ -1.15
Ciita-201ENSMUST00000023147 Cdip1Q9DB75 208 aa7.89□□□□□ -1.15
Ciita-201ENSMUST00000023147 Gm19935A0A1B0GSF9 52 aa7.89□□□□□ -1.15
Ciita-201ENSMUST00000023147 Gm28374F6SG70 93 aa7.89□□□□□ -1.15
Ciita-201ENSMUST00000023147 Gm9925F6T2U3 160 aa7.89□□□□□ -1.15
Ciita-201ENSMUST00000023147 Csdc2Q91YQ3 154 aa7.88□□□□□ -1.15
Ciita-201ENSMUST00000023147 Zfp462B1AWL2 2495 aaKnown RBP7.88□□□□□ -1.15
Ciita-201ENSMUST00000023147 CrygfQ9CXV3 174 aa7.88□□□□□ -1.15
Ciita-201ENSMUST00000023147 Gm21748Q3UE70 102 aa7.88□□□□□ -1.15
Ciita-201ENSMUST00000023147 BC025920Q3US60 128 aa7.87□□□□□ -1.15
Ciita-201ENSMUST00000023147 Ighv8-11A0A075B5X4 119 aa7.87□□□□□ -1.15
Ciita-201ENSMUST00000023147 Fhl2O70433 279 aa7.87□□□□□ -1.15
Ciita-201ENSMUST00000023147 4930556J24RikQ9D4U7 146 aa7.87□□□□□ -1.15
Ciita-201ENSMUST00000023147 P01755 137 aa7.87□□□□□ -1.15
Ciita-201ENSMUST00000023147 Defb45Q3V490 66 aa7.87□□□□□ -1.15
Ciita-201ENSMUST00000023147 Ifitm6A0A1B0GS75 124 aa7.87□□□□□ -1.15
Ciita-201ENSMUST00000023147 DscamQ9ERC8 2013 aa7.86□□□□□ -1.15
Ciita-201ENSMUST00000023147 2310009B15RikA0A0A6YWI4 143 aa7.86□□□□□ -1.15
Ciita-201ENSMUST00000023147 Ptpn13Q64512 2453 aa7.86□□□□□ -1.15
Ciita-201ENSMUST00000023147 Krtap27-1E9PX37 202 aa7.86□□□□□ -1.15
Ciita-201ENSMUST00000023147 Ighv1-72P01751 139 aa7.86□□□□□ -1.15
Ciita-201ENSMUST00000023147 Adm2Q7TNK8 150 aa7.85□□□□□ -1.15
Ciita-201ENSMUST00000023147 Wisp2Q9Z0G4 251 aa7.85□□□□□ -1.15
Ciita-201ENSMUST00000023147 Gm12216A0A1W2P827 62 aa7.84□□□□□ -1.15
Ciita-201ENSMUST00000023147 Piezo2Q8CD54 2822 aa7.84□□□□□ -1.15
Ciita-201ENSMUST00000023147 Cep350E9Q309 3095 aa7.84□□□□□ -1.15
Ciita-201ENSMUST00000023147 Gm8439G3UWA7 96 aa7.84□□□□□ -1.15
Ciita-201ENSMUST00000023147 Dnah12Q3V0Q1 3086 aa7.84□□□□□ -1.15
Ciita-201ENSMUST00000023147 A830031A19RikQ8BNT5 113 aa7.84□□□□□ -1.16
Ciita-201ENSMUST00000023147 CrygeQ03740 174 aa7.83□□□□□ -1.16
Ciita-201ENSMUST00000023147 TeppQ6IMH0 216 aa7.83□□□□□ -1.16
Ciita-201ENSMUST00000023147 Znf580Q9DB38 172 aa7.82□□□□□ -1.16
Ciita-201ENSMUST00000023147 Ighv1-56A0A0A6YXG2 117 aa7.82□□□□□ -1.16
Ciita-201ENSMUST00000023147 Gm5464Q3UY29 175 aa7.82□□□□□ -1.16
Ciita-201ENSMUST00000023147 UqcrqQ9CQ69 82 aa7.82□□□□□ -1.16
Ciita-201ENSMUST00000023147 Crip2Q9DCT8 208 aaKnown RBP7.82□□□□□ -1.16
Ciita-201ENSMUST00000023147 1700011M02RikB1AX35 88 aa7.82□□□□□ -1.16
Ciita-201ENSMUST00000023147 Gm10509O88255 85 aa7.82□□□□□ -1.16
Ciita-201ENSMUST00000023147 Gm9922Q8C3P1 144 aa7.82□□□□□ -1.16
Ciita-201ENSMUST00000023147 Trbv13-2A0A140T8N6 113 aa7.82□□□□□ -1.16
Ciita-201ENSMUST00000023147 Cdc42se2Q8BGH7 84 aa7.81□□□□□ -1.16
Ciita-201ENSMUST00000023147 Defb42Q8BVB5 75 aa7.8□□□□□ -1.16
Ciita-201ENSMUST00000023147 CenpfE9Q3P4 2997 aaKnown RBP7.8□□□□□ -1.16
Ciita-201ENSMUST00000023147 1600014C23RikQ9DAX4 101 aa7.8□□□□□ -1.16
Ciita-201ENSMUST00000023147 Gm10135F6TEE5 83 aa7.79□□□□□ -1.16
Ciita-201ENSMUST00000023147 Gpha2Q925Q5 128 aa7.79□□□□□ -1.16
Ciita-201ENSMUST00000023147 Gm10490F6VBM2 120 aa7.79□□□□□ -1.16
Ciita-201ENSMUST00000023147 Gm9767G3X930 207 aa7.79□□□□□ -1.16
Ciita-201ENSMUST00000023147 Znf575Q3TXZ1 239 aa7.78□□□□□ -1.16
Ciita-201ENSMUST00000023147 PcntP48725 2898 aa7.78□□□□□ -1.16
Ciita-201ENSMUST00000023147 Gm3285A0A1W2P7U0 201 aa7.78□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms