RNA–Protein interactions for RNA: ENSMUST00000225438.1

Shroom3-211, Transcript of Protein Shroom3, mousemouse

BASIC

Gene Shroom3, Length 5,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-211ENSMUST00000225438 TectaO08523 2155 aa12.83□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Dscaml1Q4VA61 2053 aa12.82□□□□□ -0.36
Shroom3-211ENSMUST00000225438 PlaurP35456 327 aa12.82□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Rbx1P62878 108 aa12.82□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Wipf1Q8K1I7 493 aa12.82□□□□□ -0.36
Shroom3-211ENSMUST00000225438 TshbP12656 138 aa12.81□□□□□ -0.36
Shroom3-211ENSMUST00000225438 SycnQ8VCK7 134 aa12.81□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Ndufs5Q99LY9 106 aa12.81□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Igkv3-12A0A140T8P0 119 aa12.8□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Brwd1Q921C3 2304 aa12.8□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Ighv1-66A0A075B5X5 117 aa12.8□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Rp1l1Q8CGM2 1859 aa12.8□□□□□ -0.36
Shroom3-211ENSMUST00000225438 BaalcQ8VHV1 145 aa12.79□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Wdr90Q6ZPG2 1874 aa12.79□□□□□ -0.36
Shroom3-211ENSMUST00000225438 1110002E22RikE0CYV9 1786 aa12.79□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Gm8439G3UWA7 96 aa12.79□□□□□ -0.36
Shroom3-211ENSMUST00000225438 H2al1bA0A087WP11 105 aa12.79□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Dennd4cA6H8H2 1906 aa12.79□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Gm12689Q8BQU9 117 aa12.78□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Atox1O08997 68 aaKnown RBP12.78□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Nup210Q9QY81 1886 aaKnown RBP12.78□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Prrc2aQ7TSC1 2158 aaKnown RBP12.78□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Gm12057A0A087WR21 115 aa12.77□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Sox16Q62247 57 aa12.77□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Znf706Q9D115 76 aaKnown RBP12.77□□□□□ -0.36
Shroom3-211ENSMUST00000225438 Pou2af1Q64693 256 aa12.77□□□□□ -0.36
Shroom3-211ENSMUST00000225438 P01823 113 aa12.77□□□□□ -0.37
Shroom3-211ENSMUST00000225438 Ighv1-72P01751 139 aa12.76□□□□□ -0.37
Shroom3-211ENSMUST00000225438 A0A286YCN5 57 aa12.76□□□□□ -0.37
Shroom3-211ENSMUST00000225438 P06329 120 aa12.76□□□□□ -0.37
Shroom3-211ENSMUST00000225438 H2al1aQ5M8Q2 105 aa12.75□□□□□ -0.37
Shroom3-211ENSMUST00000225438 H2al1eQ810S6 105 aa12.75□□□□□ -0.37
Shroom3-211ENSMUST00000225438 1700074P13RikQ9D9G7 251 aa12.75□□□□□ -0.37
Shroom3-211ENSMUST00000225438 Ube2d1P61080 147 aaKnown RBP12.75□□□□□ -0.37
Shroom3-211ENSMUST00000225438 ScxQ64124 207 aa12.75□□□□□ -0.37
Shroom3-211ENSMUST00000225438 Ighv8-5A0A0A6YY60 119 aa12.74□□□□□ -0.37
Shroom3-211ENSMUST00000225438 CrygfQ9CXV3 174 aa12.74□□□□□ -0.37
Shroom3-211ENSMUST00000225438 P01755 137 aa12.74□□□□□ -0.37
Shroom3-211ENSMUST00000225438 Cyyr1Q8VIH7 165 aa12.74□□□□□ -0.37
Shroom3-211ENSMUST00000225438 4930535I16RikQ9CUI2 172 aa12.73□□□□□ -0.37
Shroom3-211ENSMUST00000225438 Dido1Q8C9B9 2256 aaKnown RBP12.73□□□□□ -0.37
Shroom3-211ENSMUST00000225438 P84750 121 aa12.73□□□□□ -0.37
Shroom3-211ENSMUST00000225438 Defb40Q70KL2 73 aa12.73□□□□□ -0.37
Shroom3-211ENSMUST00000225438 CtrlQ9ER05 264 aa12.73□□□□□ -0.37
Shroom3-211ENSMUST00000225438 Znf575Q3TXZ1 239 aa12.72□□□□□ -0.37
Shroom3-211ENSMUST00000225438 Sdk1Q3UH53 2193 aa12.72□□□□□ -0.37
Shroom3-211ENSMUST00000225438 LhbO09108 141 aa12.72□□□□□ -0.37
Shroom3-211ENSMUST00000225438 Wfdc12Q9JHY3 85 aa12.72□□□□□ -0.37
Shroom3-211ENSMUST00000225438 Smrp1Q2MH31 260 aa12.71□□□□□ -0.37
Shroom3-211ENSMUST00000225438 Fer1l4A3KGK3 1992 aa12.71□□□□□ -0.37
Shroom3-211ENSMUST00000225438 Vpreb1P13372 142 aa12.71□□□□□ -0.37
Shroom3-211ENSMUST00000225438 Gm11011D3Z3L9 86 aa12.71□□□□□ -0.37
Shroom3-211ENSMUST00000225438 Pla2g1bQ9Z0Y2 146 aa12.71□□□□□ -0.37
Shroom3-211ENSMUST00000225438 Pcnx2Q5DU28 2122 aa12.71□□□□□ -0.37
Shroom3-211ENSMUST00000225438 Gm10490F6VBM2 120 aa12.71□□□□□ -0.38
Shroom3-211ENSMUST00000225438 Ndufb1P0DN34 57 aa12.7□□□□□ -0.38
Shroom3-211ENSMUST00000225438 Gm10322F7D7I4 111 aa12.69□□□□□ -0.38
Shroom3-211ENSMUST00000225438 Shisa2Q8QZV2 295 aa12.69□□□□□ -0.38
Shroom3-211ENSMUST00000225438 Defb42Q8BVB5 75 aa12.69□□□□□ -0.38
Shroom3-211ENSMUST00000225438 NbasE9Q411 2356 aa12.69□□□□□ -0.38
Shroom3-211ENSMUST00000225438 Rpl28P41105 137 aaKnown RBP12.69□□□□□ -0.38
Shroom3-211ENSMUST00000225438 Wdr38Q9D994 303 aa12.69□□□□□ -0.38
Shroom3-211ENSMUST00000225438 DscamQ9ERC8 2013 aa12.69□□□□□ -0.38
Shroom3-211ENSMUST00000225438 Gm9767G3X930 207 aa12.68□□□□□ -0.38
Shroom3-211ENSMUST00000225438 Polr2kQ63871 58 aa12.68□□□□□ -0.38
Shroom3-211ENSMUST00000225438 Gm28539A0A087WSL9 92 aa12.68□□□□□ -0.38
Shroom3-211ENSMUST00000225438 Gm16223Q8CBM3 117 aa12.68□□□□□ -0.38
Shroom3-211ENSMUST00000225438 4930564D02RikQ9D4S4 103 aa12.68□□□□□ -0.38
Shroom3-211ENSMUST00000225438 PtprsB0V2N1 1907 aa12.67□□□□□ -0.38
Shroom3-211ENSMUST00000225438 Apoc4Q61268 124 aa12.67□□□□□ -0.38
Shroom3-211ENSMUST00000225438 Gm10577Q3UDV9 132 aa12.67□□□□□ -0.38
Shroom3-211ENSMUST00000225438 Gm9922Q8C3P1 144 aa12.67□□□□□ -0.38
Shroom3-211ENSMUST00000225438 1700056E22RikF7CNM6 234 aa12.66□□□□□ -0.38
Shroom3-211ENSMUST00000225438 Cd27P41272 250 aa12.66□□□□□ -0.38
Shroom3-211ENSMUST00000225438 H2al1mQ9DAD9 105 aa12.65□□□□□ -0.38
Shroom3-211ENSMUST00000225438 Wfdc13Q5DQQ6 81 aa12.65□□□□□ -0.38
Shroom3-211ENSMUST00000225438 Zfyve26Q5DU37 2529 aa12.65□□□□□ -0.38
Shroom3-211ENSMUST00000225438 AcacbE9Q4Z2 2448 aa12.65□□□□□ -0.38
Shroom3-211ENSMUST00000225438 Ube2d3P61079 147 aa12.64□□□□□ -0.39
Shroom3-211ENSMUST00000225438 Ube2d2P62838 147 aa12.64□□□□□ -0.39
Shroom3-211ENSMUST00000225438 Defb2P82020 71 aa12.64□□□□□ -0.39
Shroom3-211ENSMUST00000225438 DysfQ9ESD7 2090 aa12.64□□□□□ -0.39
Shroom3-211ENSMUST00000225438 A0A286YE49 62 aa12.64□□□□□ -0.39
Shroom3-211ENSMUST00000225438 Gpha2Q925Q5 128 aa12.64□□□□□ -0.39
Shroom3-211ENSMUST00000225438 Gm1968Q3T9I3 115 aa12.63□□□□□ -0.39
Shroom3-211ENSMUST00000225438 Ypel4Q65Z93 127 aa12.63□□□□□ -0.39
Shroom3-211ENSMUST00000225438 Serp2Q6TAW2 65 aa12.63□□□□□ -0.39
Shroom3-211ENSMUST00000225438 1700011M02RikB1AX35 88 aa12.62□□□□□ -0.39
Shroom3-211ENSMUST00000225438 Gm10509O88255 85 aa12.62□□□□□ -0.39
Shroom3-211ENSMUST00000225438 Cdc42se2Q8BGH7 84 aa12.62□□□□□ -0.39
Shroom3-211ENSMUST00000225438 C2cd3Q52KB6 2323 aa12.62□□□□□ -0.39
Shroom3-211ENSMUST00000225438 AcanQ61282 2132 aaKnown RBP12.62□□□□□ -0.39
Shroom3-211ENSMUST00000225438 Smim1P0C8K7 78 aa12.62□□□□□ -0.39
Shroom3-211ENSMUST00000225438 Rif1Q6PR54 2419 aaKnown RBP12.62□□□□□ -0.39
Shroom3-211ENSMUST00000225438 Ighv2-9-1A0A075B697 116 aa12.61□□□□□ -0.39
Shroom3-211ENSMUST00000225438 Trbv13-2A0A140T8N6 113 aa12.61□□□□□ -0.39
Shroom3-211ENSMUST00000225438 Lypd6Q8BPP5 171 aa12.61□□□□□ -0.39
Shroom3-211ENSMUST00000225438 Igkv8-28A0A0G2JE47 121 aa12.61□□□□□ -0.39
Shroom3-211ENSMUST00000225438 Ighv8-11A0A075B5X4 119 aa12.61□□□□□ -0.39
Shroom3-211ENSMUST00000225438 CnfnQ6PCW6 111 aa12.59□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 40.8 ms