RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Gm20604F8WIA3 75 aa11.46□□□□□ -0.57
Pcdha9-201ENSMUST00000115659 Gm1968Q3T9I3 115 aa11.46□□□□□ -0.57
Pcdha9-201ENSMUST00000115659 EnhoQ8K1D8 76 aa11.46□□□□□ -0.57
Pcdha9-201ENSMUST00000115659 Prrc2aQ7TSC1 2158 aaKnown RBP11.46□□□□□ -0.57
Pcdha9-201ENSMUST00000115659 Brwd1Q921C3 2304 aa11.46□□□□□ -0.57
Pcdha9-201ENSMUST00000115659 Cox8cA6H666 72 aa11.46□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Plac8l1Q08EJ0 177 aa11.46□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 9530003J23RikQ8BM26 151 aa11.46□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Gm10647E9Q8X0 124 aa11.45□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Vpreb1P13372 142 aa11.45□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Lce6aD3YV94 81 aa11.45□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 A830005F24RikQ8BRT5 167 aa11.45□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Ube2d1P61080 147 aaKnown RBP11.45□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Adamts20P59511 1906 aa11.45□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Serp2Q6TAW2 65 aa11.45□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Prr15lQ8JZM2 100 aa11.45□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Znf575Q3TXZ1 239 aa11.44□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Rnf152Q8BG47 203 aa11.44□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Gm8439G3UWA7 96 aa11.44□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 PlaurP35456 327 aa11.44□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Gm10490F6VBM2 120 aa11.43□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 2010109I03RikQ9CQ11 111 aa11.43□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Sorl1O88307 2215 aaKnown RBP11.43□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 4930564D02RikQ9D4S4 103 aa11.43□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Dido1Q8C9B9 2256 aaKnown RBP11.42□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Ccdc179J3QM76 67 aa11.42□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 P06320 134 aa11.42□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Tcl1b5P56845 121 aa11.42□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Pla2g2eQ9QUL3 142 aa11.42□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Gm10509O88255 85 aa11.42□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 FshbQ60687 130 aa11.41□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 PrlhG3UWC3 86 aa11.41□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Q8K1L6 76 aa11.41□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 DscamQ9ERC8 2013 aa11.41□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Ighv1-72P01751 139 aa11.4□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Zfyve26Q5DU37 2529 aa11.4□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Cox7bP56393 80 aa11.4□□□□□ -0.58
Pcdha9-201ENSMUST00000115659 Igkv3-4A0A140T8Q4 119 aa11.39□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Atox1O08997 68 aaKnown RBP11.39□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Ube2d3P61079 147 aa11.38□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Ube2d2P62838 147 aa11.38□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 AcanQ61282 2132 aaKnown RBP11.38□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 5730596B20RikQ8BQ08 205 aa11.37□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Cdc42se2Q8BGH7 84 aa11.37□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Gm9922Q8C3P1 144 aa11.37□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Tanc2A2A690 1994 aa11.37□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 AcacbE9Q4Z2 2448 aa11.37□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Defb42Q8BVB5 75 aa11.37□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Obox2E9PXV9 151 aa11.36□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 CenpwQ3URR0 86 aa11.36□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 1700011M02RikB1AX35 88 aa11.36□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 P01755 137 aa11.36□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Sec61gP60060 68 aa11.36□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Esm1Q9QYY7 184 aa11.36□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Krtap27-1E9PX37 202 aa11.36□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Sdk1Q3UH53 2193 aa11.35□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Ighv2-9-1A0A075B697 116 aa11.35□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 BaalcQ8VHV1 145 aa11.35□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Wfdc10Q3V2J9 124 aa11.35□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Defb13Q8R2I4 64 aa11.35□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 SrarpQ3ULG3 163 aa11.34□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Igkv4-92A0A0B4J1I2 117 aa11.34□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Q9DAB9 146 aa11.34□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Igkv3-3A0A140T8Q0 119 aa11.34□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 U90926O08546 118 aa11.33□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Cd27P41272 250 aa11.33□□□□□ -0.59
Pcdha9-201ENSMUST00000115659 Smr3aQ61900 147 aa11.32□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 Igkv8-21A0A140T8P7 120 aa11.32□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 Gm21748Q3UE70 102 aa11.32□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 Tns1E9Q0S6 1888 aaKnown RBP11.31□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 Wfdc15aQ8BH89 80 aa11.31□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 NbasE9Q411 2356 aa11.31□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 Arid1bE9Q4N7 2244 aa11.3□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 SvipQ3UZP4 77 aa11.3□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 4930556J24RikQ9D4U7 146 aa11.3□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 Rpl28P41105 137 aaKnown RBP11.29□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 A830031A19RikQ8BNT5 113 aa11.29□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 Fam19a5Q91WE9 132 aa11.29□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 Ndufb1P0DN34 57 aa11.29□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 Pcsk5Q04592 1877 aa11.28□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 Ighv8-11A0A075B5X4 119 aa11.28□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 SbsponQ3UPR9 264 aa11.28□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 4930535I16RikQ9CUI2 172 aa11.28□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 Rif1Q6PR54 2419 aaKnown RBP11.28□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 Igkv1-117A0A140T8M0 119 aa11.28□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 H2al1bA0A087WP11 105 aa11.27□□□□□ -0.6
Pcdha9-201ENSMUST00000115659 Gm19935A0A1B0GSF9 52 aa11.27□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Gm26566Q8CAC1 153 aa11.27□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 CrygfQ9CXV3 174 aa11.26□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 B230217C12RikE9Q3Z1 139 aa11.26□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 A930009A15RikG3UYI6 118 aa11.26□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Igkv1-110A0A0B4J1I0 119 aa11.26□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 OtoglF7A4A7 2325 aa11.25□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 4930524J08RikQ9CUJ5 163 aa11.25□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Wfdc12Q9JHY3 85 aa11.25□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Ighv10-3A0A075B5T6 119 aa11.25□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Crip3Q6Q6R3 243 aa11.25□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Shisa2Q8QZV2 295 aa11.25□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Gm11011D3Z3L9 86 aa11.24□□□□□ -0.61
Pcdha9-201ENSMUST00000115659 Gm4707V9GXN5 68 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 73.7 ms