RNA–Protein interactions for RNA: ENSMUST00000107934.1

Shank1-201, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-201ENSMUST00000107934 Tns1E9Q0S6 1888 aaKnown RBP11.52□□□□□ -0.56
Shank1-201ENSMUST00000107934 A0A286YCN5 57 aa11.52□□□□□ -0.57
Shank1-201ENSMUST00000107934 Vpreb2P13373 142 aa11.52□□□□□ -0.57
Shank1-201ENSMUST00000107934 Defb42Q8BVB5 75 aa11.52□□□□□ -0.57
Shank1-201ENSMUST00000107934 Pou2af1Q64693 256 aa11.52□□□□□ -0.57
Shank1-201ENSMUST00000107934 Igkv1-110A0A0B4J1I0 119 aa11.52□□□□□ -0.57
Shank1-201ENSMUST00000107934 Q9DAQ5 155 aa11.51□□□□□ -0.57
Shank1-201ENSMUST00000107934 Ighv2-6-8A0A0A6YWY9 116 aa11.51□□□□□ -0.57
Shank1-201ENSMUST00000107934 Gm16223Q8CBM3 117 aa11.51□□□□□ -0.57
Shank1-201ENSMUST00000107934 Jmjd1cQ69ZK6 2350 aa11.5□□□□□ -0.57
Shank1-201ENSMUST00000107934 P06329 120 aa11.5□□□□□ -0.57
Shank1-201ENSMUST00000107934 Rnf152Q8BG47 203 aa11.5□□□□□ -0.57
Shank1-201ENSMUST00000107934 Shisa2Q8QZV2 295 aa11.5□□□□□ -0.57
Shank1-201ENSMUST00000107934 Pcnx3Q8VI59 2028 aa11.5□□□□□ -0.57
Shank1-201ENSMUST00000107934 Sec16aA2AIX1 2377 aa11.5□□□□□ -0.57
Shank1-201ENSMUST00000107934 Igkv8-30A0A140T8M3 121 aa11.5□□□□□ -0.57
Shank1-201ENSMUST00000107934 PpdpfQ9CR37 115 aa11.5□□□□□ -0.57
Shank1-201ENSMUST00000107934 Wfdc12Q9JHY3 85 aa11.5□□□□□ -0.57
Shank1-201ENSMUST00000107934 1700056E22RikF7CNM6 234 aa11.5□□□□□ -0.57
Shank1-201ENSMUST00000107934 Ep300B2RWS6 2412 aa11.49□□□□□ -0.57
Shank1-201ENSMUST00000107934 LhbO09108 141 aa11.49□□□□□ -0.57
Shank1-201ENSMUST00000107934 Gpha2Q925Q5 128 aa11.49□□□□□ -0.57
Shank1-201ENSMUST00000107934 Pla2g1bQ9Z0Y2 146 aa11.49□□□□□ -0.57
Shank1-201ENSMUST00000107934 P01823 113 aa11.48□□□□□ -0.57
Shank1-201ENSMUST00000107934 Prpf8Q99PV0 2335 aaKnown RBP11.48□□□□□ -0.57
Shank1-201ENSMUST00000107934 Defb10Q8R2I8 73 aa11.48□□□□□ -0.57
Shank1-201ENSMUST00000107934 Ube2d1P61080 147 aaKnown RBP11.48□□□□□ -0.57
Shank1-201ENSMUST00000107934 EnhoQ8K1D8 76 aa11.48□□□□□ -0.57
Shank1-201ENSMUST00000107934 Timm17bQ9Z0V7 172 aa11.47□□□□□ -0.57
Shank1-201ENSMUST00000107934 ScxQ64124 207 aa11.47□□□□□ -0.57
Shank1-201ENSMUST00000107934 4930535I16RikQ9CUI2 172 aa11.47□□□□□ -0.57
Shank1-201ENSMUST00000107934 DscamQ9ERC8 2013 aa11.47□□□□□ -0.57
Shank1-201ENSMUST00000107934 Gm6899Q3USS0 134 aa11.46□□□□□ -0.57
Shank1-201ENSMUST00000107934 Ovol3D3YYM0 189 aa11.46□□□□□ -0.57
Shank1-201ENSMUST00000107934 P06320 134 aa11.46□□□□□ -0.57
Shank1-201ENSMUST00000107934 Igkv3-12A0A140T8P0 119 aa11.46□□□□□ -0.58
Shank1-201ENSMUST00000107934 Q8K1L6 76 aa11.46□□□□□ -0.58
Shank1-201ENSMUST00000107934 Ndufc1Q9CQY9 76 aa11.46□□□□□ -0.58
Shank1-201ENSMUST00000107934 Defb40Q70KL2 73 aa11.46□□□□□ -0.58
Shank1-201ENSMUST00000107934 Gm9922Q8C3P1 144 aa11.45□□□□□ -0.58
Shank1-201ENSMUST00000107934 Adamts20P59511 1906 aa11.44□□□□□ -0.58
Shank1-201ENSMUST00000107934 Ighv8-5A0A0A6YY60 119 aa11.44□□□□□ -0.58
Shank1-201ENSMUST00000107934 CrygeQ03740 174 aa11.44□□□□□ -0.58
Shank1-201ENSMUST00000107934 1700074P13RikQ9D9G7 251 aa11.44□□□□□ -0.58
Shank1-201ENSMUST00000107934 Lypd6Q8BPP5 171 aa11.44□□□□□ -0.58
Shank1-201ENSMUST00000107934 Ypel4Q65Z93 127 aa11.43□□□□□ -0.58
Shank1-201ENSMUST00000107934 9230102O04RikA2ASX7 82 aa11.43□□□□□ -0.58
Shank1-201ENSMUST00000107934 D730001G18RikA0A087WQU7 115 aa11.43□□□□□ -0.58
Shank1-201ENSMUST00000107934 Znf706Q9D115 76 aaKnown RBP11.43□□□□□ -0.58
Shank1-201ENSMUST00000107934 Gm11011D3Z3L9 86 aa11.42□□□□□ -0.58
Shank1-201ENSMUST00000107934 Trbv13-2A0A140T8N6 113 aa11.42□□□□□ -0.58
Shank1-201ENSMUST00000107934 A930009A15RikG3UYI6 118 aa11.42□□□□□ -0.58
Shank1-201ENSMUST00000107934 Gm10509O88255 85 aa11.42□□□□□ -0.58
Shank1-201ENSMUST00000107934 Bri3P28662 125 aa11.41□□□□□ -0.58
Shank1-201ENSMUST00000107934 Abca4O35600 2310 aa11.41□□□□□ -0.58
Shank1-201ENSMUST00000107934 Ube2d3P61079 147 aa11.41□□□□□ -0.58
Shank1-201ENSMUST00000107934 Ube2d2P62838 147 aa11.41□□□□□ -0.58
Shank1-201ENSMUST00000107934 Gm21748Q3UE70 102 aa11.41□□□□□ -0.58
Shank1-201ENSMUST00000107934 Wfdc13Q5DQQ6 81 aa11.4□□□□□ -0.58
Shank1-201ENSMUST00000107934 Tanc2A2A690 1994 aa11.4□□□□□ -0.58
Shank1-201ENSMUST00000107934 Sox16Q62247 57 aa11.4□□□□□ -0.58
Shank1-201ENSMUST00000107934 4930564D02RikQ9D4S4 103 aa11.4□□□□□ -0.58
Shank1-201ENSMUST00000107934 Polr2kQ63871 58 aa11.4□□□□□ -0.59
Shank1-201ENSMUST00000107934 Ndufs5Q99LY9 106 aa11.4□□□□□ -0.59
Shank1-201ENSMUST00000107934 DysfQ9ESD7 2090 aa11.39□□□□□ -0.59
Shank1-201ENSMUST00000107934 Dopey2Q3UHQ6 2295 aa11.39□□□□□ -0.59
Shank1-201ENSMUST00000107934 Gm10322F7D7I4 111 aa11.39□□□□□ -0.59
Shank1-201ENSMUST00000107934 Gm3285A0A1W2P7U0 201 aa11.38□□□□□ -0.59
Shank1-201ENSMUST00000107934 Rpl28P41105 137 aaKnown RBP11.38□□□□□ -0.59
Shank1-201ENSMUST00000107934 Tmem213Q08EA8 116 aa11.38□□□□□ -0.59
Shank1-201ENSMUST00000107934 Cdc42se2Q8BGH7 84 aa11.38□□□□□ -0.59
Shank1-201ENSMUST00000107934 Ly6g6cQ9Z1Q4 126 aa11.37□□□□□ -0.59
Shank1-201ENSMUST00000107934 Gm20604F8WIA3 75 aa11.37□□□□□ -0.59
Shank1-201ENSMUST00000107934 BaalcQ8VHV1 145 aa11.37□□□□□ -0.59
Shank1-201ENSMUST00000107934 AtrxQ61687 2476 aaKnown RBP11.37□□□□□ -0.59
Shank1-201ENSMUST00000107934 1700011M02RikB1AX35 88 aa11.37□□□□□ -0.59
Shank1-201ENSMUST00000107934 Psmb11Q8BG41 302 aa11.37□□□□□ -0.59
Shank1-201ENSMUST00000107934 CtrlQ9ER05 264 aa11.37□□□□□ -0.59
Shank1-201ENSMUST00000107934 Cd164l2Q9D6W7 172 aa11.37□□□□□ -0.59
Shank1-201ENSMUST00000107934 Smim1P0C8K7 78 aa11.36□□□□□ -0.59
Shank1-201ENSMUST00000107934 H2al1bA0A087WP11 105 aa11.35□□□□□ -0.59
Shank1-201ENSMUST00000107934 Gm3443F7CCV5 94 aa11.35□□□□□ -0.59
Shank1-201ENSMUST00000107934 H2al1aQ5M8Q2 105 aa11.35□□□□□ -0.59
Shank1-201ENSMUST00000107934 H2al1eQ810S6 105 aa11.35□□□□□ -0.59
Shank1-201ENSMUST00000107934 Gm26566Q8CAC1 153 aa11.35□□□□□ -0.59
Shank1-201ENSMUST00000107934 SonQ9QX47 2444 aaKnown RBP11.35□□□□□ -0.59
Shank1-201ENSMUST00000107934 CnfnQ6PCW6 111 aa11.35□□□□□ -0.59
Shank1-201ENSMUST00000107934 Cd27P41272 250 aa11.34□□□□□ -0.59
Shank1-201ENSMUST00000107934 B230217C12RikE9Q3Z1 139 aa11.34□□□□□ -0.59
Shank1-201ENSMUST00000107934 Gm1968Q3T9I3 115 aa11.34□□□□□ -0.59
Shank1-201ENSMUST00000107934 Vpreb1P13372 142 aa11.33□□□□□ -0.6
Shank1-201ENSMUST00000107934 Sdk1Q3UH53 2193 aa11.33□□□□□ -0.6
Shank1-201ENSMUST00000107934 Wfdc3Q14AE4 130 aa11.33□□□□□ -0.6
Shank1-201ENSMUST00000107934 Atox1O08997 68 aaKnown RBP11.32□□□□□ -0.6
Shank1-201ENSMUST00000107934 Dscaml1Q4VA61 2053 aa11.32□□□□□ -0.6
Shank1-201ENSMUST00000107934 Gm10577Q3UDV9 132 aa11.32□□□□□ -0.6
Shank1-201ENSMUST00000107934 1600014C23RikQ9DAX4 101 aa11.32□□□□□ -0.6
Shank1-201ENSMUST00000107934 Ighv8-11A0A075B5X4 119 aa11.31□□□□□ -0.6
Shank1-201ENSMUST00000107934 Gm28539A0A087WSL9 92 aa11.3□□□□□ -0.6
Shank1-201ENSMUST00000107934 Gm9573F7C950 1606 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 42.3 ms