RNA–Protein interactions for RNA: ENSMUST00000208058.1

Pcf11-204, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

TSL 5 BASIC

Gene Pcf11, Length 461 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-204ENSMUST00000208058 Igkv6-13A0A0G2JGY3 119 aa13.78□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Gm45785A0A1B0GT05 94 aa13.78□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Sumo2P61957 95 aaKnown RBP13.78□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Prss58Q8BW11 241 aa13.78□□□□□ -0.2
Pcf11-204ENSMUST00000208058 Eif4ebp1Q60876 117 aa13.77□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Ndufa12Q7TMF3 145 aaKnown RBP13.77□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Btf3l4Q9CQH7 158 aaKnown RBP13.77□□□□□ -0.21
Pcf11-204ENSMUST00000208058 4930519P11RikQ9CUJ8 166 aa13.77□□□□□ -0.21
Pcf11-204ENSMUST00000208058 TcraP01849 138 aa13.76□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Prp2P05143 317 aa13.76□□□□□ -0.21
Pcf11-204ENSMUST00000208058 ErasQ7TN89 227 aa13.76□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Pdzd11Q9CZG9 140 aa13.76□□□□□ -0.21
Pcf11-204ENSMUST00000208058 MobpQ9D2P8 170 aa13.76□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Gm12169F2Z474 250 aa13.75□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Ndufa4Q62425 82 aaKnown RBP13.75□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Igkv4-92A0A0B4J1I2 117 aa13.74□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Esp4A8R0T8 117 aa13.74□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Gm10271F6WY25 52 aa13.74□□□□□ -0.21
Pcf11-204ENSMUST00000208058 9430069I07RikQ9CX21 111 aa13.74□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Gm17430F6RSK3 157 aa13.73□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Gm10065F6TJM2 114 aa13.73□□□□□ -0.21
Pcf11-204ENSMUST00000208058 P01791 123 aa13.73□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Cdc42se2Q8BGH7 84 aa13.73□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Olfr509Q8VF20 321 aa13.73□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Smco4Q9JIS3 59 aa13.73□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Tmem238A9JSM3 176 aa13.72□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Ndufa1O35683 70 aa13.72□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Rpl32P62911 135 aaKnown RBP13.72□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Rab14Q91V41 215 aaKnown RBP13.72□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Fam241bQ9D882 120 aa13.72□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Lrp1Q91ZX7 4545 aaKnown RBP13.72□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Ube2wQ8VDW4 151 aa13.71□□□□□ -0.21
Pcf11-204ENSMUST00000208058 Ceacam15A0A0B4J1L0 234 aa13.7□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Gpr15lA0A0B4J1N3 78 aa13.7□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Mmp23O88676 391 aa13.7□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Q8CF25 301 aa13.7□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Olfr1118A0A0J9YUE7 307 aa13.69□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Krtap29-1A2A5X4 342 aa13.69□□□□□ -0.22
Pcf11-204ENSMUST00000208058 A930003A15RikQ3U552 87 aa13.69□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Fat2Q5F226 4351 aa13.69□□□□□ -0.22
Pcf11-204ENSMUST00000208058 SstP60041 116 aa13.68□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Gm10334Q792Y8 246 aa13.68□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Tmem140Q8BGY5 185 aa13.68□□□□□ -0.22
Pcf11-204ENSMUST00000208058 BB014433Q8C5R5 389 aa13.68□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Psmg3Q9CZH3 122 aa13.68□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Trav9n-4A0A075B631 113 aa13.67□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Ighv2-9-1A0A075B697 116 aa13.67□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Olfr869E9PX82 323 aa13.67□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Defa10P50708 93 aa13.67□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Lrp1bQ9JI18 4599 aa13.66□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Tmsb15aA2AEH9 79 aa13.66□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Vsig4F6TUL9 280 aa13.66□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Vpreb2P13373 142 aa13.66□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Igkv4-79A0A075B5L8 119 aa13.65□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Igkv3-2A0A075B5P0 119 aa13.65□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Bak1O08734 209 aa13.65□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Ndufb11O09111 151 aa13.65□□□□□ -0.22
Pcf11-204ENSMUST00000208058 P03985 172 aa13.65□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Q5BN45 167 aa13.65□□□□□ -0.22
Pcf11-204ENSMUST00000208058 PdpnQ62011 172 aa13.65□□□□□ -0.22
Pcf11-204ENSMUST00000208058 RetnlbQ99P86 105 aa13.65□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Anapc16Q9CPV2 110 aa13.65□□□□□ -0.22
Pcf11-204ENSMUST00000208058 Tmem223Q9CQE2 199 aaKnown RBP13.64□□□□□ -0.23
Pcf11-204ENSMUST00000208058 Znf414Q9DCK4 299 aa13.64□□□□□ -0.23
Pcf11-204ENSMUST00000208058 Gm11444F6QMA6 170 aa13.63□□□□□ -0.23
Pcf11-204ENSMUST00000208058 Defa9P50707 93 aa13.63□□□□□ -0.23
Pcf11-204ENSMUST00000208058 SpinklQ8CEK3 90 aa13.63□□□□□ -0.23
Pcf11-204ENSMUST00000208058 4930596D02RikQ3V0H9 216 aa13.62□□□□□ -0.23
Pcf11-204ENSMUST00000208058 Ormdl3Q9CPZ6 153 aa13.62□□□□□ -0.23
Pcf11-204ENSMUST00000208058 Atxn7l1Q9CZ05 146 aa13.62□□□□□ -0.23
Pcf11-204ENSMUST00000208058 Lgals6O54891 301 aa13.61□□□□□ -0.23
Pcf11-204ENSMUST00000208058 P01896 185 aa13.61□□□□□ -0.23
Pcf11-204ENSMUST00000208058 Gm10735Q3US96 136 aa13.61□□□□□ -0.23
Pcf11-204ENSMUST00000208058 CenpxQ8C4X1 78 aa13.61□□□□□ -0.23
Pcf11-204ENSMUST00000208058 Trav14-3A0A075B607 120 aa13.6□□□□□ -0.23
Pcf11-204ENSMUST00000208058 LalbaP29752 143 aa13.59□□□□□ -0.23
Pcf11-204ENSMUST00000208058 Rpl39P62892 51 aa13.59□□□□□ -0.23
Pcf11-204ENSMUST00000208058 Gm9747Q810H1 104 aa13.59□□□□□ -0.23
Pcf11-204ENSMUST00000208058 Olfr1116E9PXB8 307 aa13.58□□□□□ -0.24
Pcf11-204ENSMUST00000208058 Rpl37aP61514 92 aa13.58□□□□□ -0.24
Pcf11-204ENSMUST00000208058 Gm11733Q8BQP1 125 aa13.58□□□□□ -0.24
Pcf11-204ENSMUST00000208058 Hectd4E9Q2E4 4418 aa13.58□□□□□ -0.24
Pcf11-204ENSMUST00000208058 Trav16d-dv11A0A075B617 117 aa13.57□□□□□ -0.24
Pcf11-204ENSMUST00000208058 Tfpi2O35536 230 aa13.57□□□□□ -0.24
Pcf11-204ENSMUST00000208058 Ighv1-72P01751 139 aa13.57□□□□□ -0.24
Pcf11-204ENSMUST00000208058 SycnQ8VCK7 134 aa13.57□□□□□ -0.24
Pcf11-204ENSMUST00000208058 Ifitm1Q9D103 106 aa13.57□□□□□ -0.24
Pcf11-204ENSMUST00000208058 Gm10203F6QJ09 66 aa13.56□□□□□ -0.24
Pcf11-204ENSMUST00000208058 Sprr1aQ62266 144 aa13.56□□□□□ -0.24
Pcf11-204ENSMUST00000208058 Mrps26Q80ZS3 200 aa13.56□□□□□ -0.24
Pcf11-204ENSMUST00000208058 Ssna1Q9JJ94 119 aa13.55□□□□□ -0.24
Pcf11-204ENSMUST00000208058 SeboxP70368 190 aa13.54□□□□□ -0.24
Pcf11-204ENSMUST00000208058 Bola1Q9D8S9 137 aaKnown RBP13.54□□□□□ -0.24
Pcf11-204ENSMUST00000208058 Tagln2Q9WVA4 199 aaKnown RBP13.54□□□□□ -0.24
Pcf11-204ENSMUST00000208058 4930546C10RikE9Q4Y3 121 aa13.53□□□□□ -0.24
Pcf11-204ENSMUST00000208058 PkigO70139 76 aa13.53□□□□□ -0.24
Pcf11-204ENSMUST00000208058 Igf1P05017 153 aa13.53□□□□□ -0.24
Pcf11-204ENSMUST00000208058 Olfr984Q8VFN1 314 aa13.53□□□□□ -0.24
Pcf11-204ENSMUST00000208058 FcorP0DJI6 106 aa13.52□□□□□ -0.25
Pcf11-204ENSMUST00000208058 MymxQ2Q5T5 84 aa13.51□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 53.6 ms