RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Wipf1Q8K1I7 493 aa13.08□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Tmem254aP0DN89 123 aa13.08□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Tmem254bP0DN90 123 aa13.08□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Tmem254cP0DN91 123 aa13.08□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Igkv1-88A0A140T8N1 120 aa13.08□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Ighv12-3A0A075B5T1 117 aa13.08□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Gm12057A0A087WR21 115 aa13.08□□□□□ -0.32
Ebf3-204ENSMUST00000169486 4930470P17RikQ9D542 155 aa13.08□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Tmem213Q08EA8 116 aa13.07□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Ormdl1Q921I0 153 aa13.07□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Arhgap32Q811P8 2089 aa13.07□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Fhl1P97447 280 aaKnown RBP13.06□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Ighv1-75A0A075B5Y2 117 aa13.06□□□□□ -0.32
Ebf3-204ENSMUST00000169486 4930546C10RikE9Q4Y3 121 aa13.06□□□□□ -0.32
Ebf3-204ENSMUST00000169486 SvipQ3UZP4 77 aa13.06□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Gm4861Q8C5A4 106 aa13.06□□□□□ -0.32
Ebf3-204ENSMUST00000169486 P01820 115 aa13.06□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Ube2bP63147 152 aa13.06□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Fer1l4A3KGK3 1992 aa13.05□□□□□ -0.32
Ebf3-204ENSMUST00000169486 CrygdP04342 174 aa13.05□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Wdr90Q6ZPG2 1874 aa13.05□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Wdr38Q9D994 303 aa13.04□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Fxyd5P97808 178 aa13.04□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Wisp2Q9Z0G4 251 aa13.03□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Sptbn4E9PX29 2561 aa13.03□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Sh2d1aO88890 126 aa13.03□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Tet2Q4JK59 1912 aaKnown RBP13.03□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Ighv8-12A0A0G2JDE1 119 aa13.02□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Edn2P22389 175 aa13.02□□□□□ -0.32
Ebf3-204ENSMUST00000169486 Sprr3O09116 238 aa13.01□□□□□ -0.33
Ebf3-204ENSMUST00000169486 E130116L18RikQ8BMV6 101 aa13.01□□□□□ -0.33
Ebf3-204ENSMUST00000169486 TshbP12656 138 aa13.01□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Lmo4P61969 165 aa13.01□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Camk2n2Q78WH7 79 aa13□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Rpl39lQ9CQD0 51 aa13□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Igkv8-26A0A075B5N5 123 aa13□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Gm9913Q8BQQ2 135 aa13□□□□□ -0.33
Ebf3-204ENSMUST00000169486 C1qcQ02105 246 aa13□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Gm16223Q8CBM3 117 aa13□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Notch2O35516 2470 aa13□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Naa38Q9D2U5 125 aa13□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Ighv1-85A0A075B5Y6 117 aa12.99□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Ighv8-5A0A0A6YY60 119 aa12.99□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Ly6hQ9WUC3 139 aa12.99□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Defb18Q30KP5 85 aa12.99□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Pla2g2aP31482 146 aa12.98□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Ighv2-3A0A075B696 115 aa12.98□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Adamts20P59511 1906 aa12.98□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Tmem223Q9CQE2 199 aaKnown RBP12.98□□□□□ -0.33
Ebf3-204ENSMUST00000169486 A130051J06RikQ8CAU1 227 aa12.98□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Myo9aQ8C170 2542 aa12.97□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Ankhd1E9PUR0 2548 aaKnown RBP12.97□□□□□ -0.33
Ebf3-204ENSMUST00000169486 PtprqP0C5E4 2300 aa12.97□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Tcte2E9PY37 120 aa12.97□□□□□ -0.33
Ebf3-204ENSMUST00000169486 NrgnP60761 78 aa12.97□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Gm6899Q3USS0 134 aa12.97□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Cox7b2Q9D2H1 82 aa12.97□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Ppp1r32Q148A4 427 aa12.96□□□□□ -0.33
Ebf3-204ENSMUST00000169486 Chd8Q09XV5 2582 aaKnown RBP12.96□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Spata25Q9DA57 226 aa12.96□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Pla2g2dQ9WVF6 144 aa12.95□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Smim1P0C8K7 78 aa12.95□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Rpl18aP62717 176 aaKnown RBP12.95□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Q9D8Q6 235 aa12.95□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Rnase1P00683 149 aa12.94□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Spink4O35679 86 aa12.94□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Gm17577J3QNF7 156 aa12.94□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Zc2hc1bQ9D534 172 aa12.94□□□□□ -0.34
Ebf3-204ENSMUST00000169486 DscamQ9ERC8 2013 aa12.93□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Trav9n-4A0A075B631 113 aa12.93□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Fam222aQ6PGH4 453 aa12.92□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Hivep2Q3UHF7 2430 aa12.92□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Vpreb2P13373 142 aa12.92□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Higd2aQ9CQJ1 106 aa12.91□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Usp9xP70398 2559 aaKnown RBP12.91□□□□□ -0.34
Ebf3-204ENSMUST00000169486 P01745 121 aa12.91□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Eif4ebp1Q60876 117 aa12.91□□□□□ -0.34
Ebf3-204ENSMUST00000169486 PolqQ8CGS6 2544 aa12.91□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Gm3618D3Z4P5 127 aa12.9□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Ebi3O35228 228 aa12.9□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Reg3bP35230 175 aa12.9□□□□□ -0.34
Ebf3-204ENSMUST00000169486 Ighv1-61P01749 117 aa12.9□□□□□ -0.34
Ebf3-204ENSMUST00000169486 1520401A03RikA0A0J9YVH6 598 aa12.89□□□□□ -0.35
Ebf3-204ENSMUST00000169486 2010109I03RikQ9CQ11 111 aa12.89□□□□□ -0.35
Ebf3-204ENSMUST00000169486 Ighv1-66A0A075B5X5 117 aa12.89□□□□□ -0.35
Ebf3-204ENSMUST00000169486 Ighv1-72P01751 139 aa12.89□□□□□ -0.35
Ebf3-204ENSMUST00000169486 Gm37389A0A0A6YW05 95 aa12.89□□□□□ -0.35
Ebf3-204ENSMUST00000169486 Pde6gP09174 87 aa12.89□□□□□ -0.35
Ebf3-204ENSMUST00000169486 Ighv2-6-8A0A0A6YWY9 116 aa12.89□□□□□ -0.35
Ebf3-204ENSMUST00000169486 Ufsp1Q9CZP0 217 aa12.89□□□□□ -0.35
Ebf3-204ENSMUST00000169486 Gphb5Q812B2 130 aa12.88□□□□□ -0.35
Ebf3-204ENSMUST00000169486 4930535I16RikQ9CUI2 172 aa12.88□□□□□ -0.35
Ebf3-204ENSMUST00000169486 Timm17bQ9Z0V7 172 aa12.88□□□□□ -0.35
Ebf3-204ENSMUST00000169486 P01823 113 aa12.88□□□□□ -0.35
Ebf3-204ENSMUST00000169486 Polr2kQ63871 58 aa12.88□□□□□ -0.35
Ebf3-204ENSMUST00000169486 EnhoQ8K1D8 76 aa12.88□□□□□ -0.35
Ebf3-204ENSMUST00000169486 Spry2Q9QXV8 315 aa12.87□□□□□ -0.35
Ebf3-204ENSMUST00000169486 Cox8cA6H666 72 aa12.86□□□□□ -0.35
Ebf3-204ENSMUST00000169486 Pip4p1Q3TWL2 284 aa12.86□□□□□ -0.35
Ebf3-204ENSMUST00000169486 LhbO09108 141 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 61.7 ms