RNA–Protein interactions for RNA: ENSMUST00000053856.5

Pcdhb17-201, Transcript of MCG141290, mousemouse

APPRIS P1 BASIC

Gene Pcdhb17, Length 4,660 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17-201ENSMUST00000053856 Eml6Q5SQM0 1958 aa8.55□□□□□ -1.04
Pcdhb17-201ENSMUST00000053856 DysfQ9ESD7 2090 aa8.54□□□□□ -1.04
Pcdhb17-201ENSMUST00000053856 Rbm3O89086 153 aaKnown RBP8.54□□□□□ -1.04
Pcdhb17-201ENSMUST00000053856 A130051J06RikQ8CAU1 227 aa8.54□□□□□ -1.04
Pcdhb17-201ENSMUST00000053856 Ighv1-63A0A075B5X2 117 aa8.54□□□□□ -1.04
Pcdhb17-201ENSMUST00000053856 Esm1Q9QYY7 184 aa8.54□□□□□ -1.04
Pcdhb17-201ENSMUST00000053856 Igkv8-18A0A0B4J1J3 123 aa8.54□□□□□ -1.04
Pcdhb17-201ENSMUST00000053856 OdaphJ3QNT8 126 aa8.54□□□□□ -1.04
Pcdhb17-201ENSMUST00000053856 Ovol3D3YYM0 189 aa8.54□□□□□ -1.04
Pcdhb17-201ENSMUST00000053856 Col8a2P25318 699 aa8.53□□□□□ -1.04
Pcdhb17-201ENSMUST00000053856 OtoglF7A4A7 2325 aa8.53□□□□□ -1.04
Pcdhb17-201ENSMUST00000053856 Igkv4-78A0A0A6YYE5 119 aa8.53□□□□□ -1.04
Pcdhb17-201ENSMUST00000053856 Mrpl35Q9CQL6 188 aa8.53□□□□□ -1.04
Pcdhb17-201ENSMUST00000053856 Gm9767G3X930 207 aa8.53□□□□□ -1.04
Pcdhb17-201ENSMUST00000053856 Q9D131 166 aa8.53□□□□□ -1.04
Pcdhb17-201ENSMUST00000053856 Gm42715A0A087WP63 3095 aaKnown RBP8.52□□□□□ -1.04
Pcdhb17-201ENSMUST00000053856 Ighv1-85A0A075B5Y6 117 aa8.52□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 BC107364E9Q5A2 140 aa8.52□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Tln1P26039 2541 aaKnown RBP8.52□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Ighv1-59A0A0A6YXE0 117 aa8.52□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Atp5eP56382 52 aa8.52□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 PlaurP35456 327 aa8.51□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 P18527 97 aa8.51□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Tmem258P61166 79 aa8.51□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Ang3P97802 145 aa8.51□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Sptbn4E9PX29 2561 aa8.51□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 P84751 237 aa8.51□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Snai3Q9QY31 287 aa8.51□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Pde6gP09174 87 aa8.51□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 CrygfQ9CXV3 174 aa8.51□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Cryba4Q9JJV0 196 aa8.51□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Lrrk2Q5S006 2527 aa8.51□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Trav13n-1A0A0G2JEU8 110 aa8.5□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Fhl2O70433 279 aa8.5□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Acyp1P56376 99 aa8.5□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Ube2aQ9Z255 152 aa8.5□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Cfap126Q6P8X9 189 aa8.5□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Q9D8Q6 235 aa8.5□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 1700010B08RikQ9DAI7 102 aa8.5□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Trav11A0A0B4J1J9 114 aa8.5□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Smim20D3Z7Q2 69 aa8.5□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 P06328 117 aa8.5□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Tns1E9Q0S6 1888 aaKnown RBP8.5□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 PcntP48725 2898 aa8.5□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Gm21748Q3UE70 102 aa8.5□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Gm44965A0A0N4SVR3 59 aa8.49□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Rbx1P62878 108 aa8.49□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 CtrlQ9ER05 264 aa8.49□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Chd8Q09XV5 2582 aaKnown RBP8.48□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Igkv3-5A0A140T8M6 119 aa8.48□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 9430015G10RikA2ASP7 199 aa8.48□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 AngP21570 145 aa8.48□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 AcanQ61282 2132 aaKnown RBP8.48□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Igkv4-58A0A0G2JGI6 119 aa8.47□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Tmem213Q08EA8 116 aa8.47□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Triap1Q9D8Z2 76 aa8.47□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Cox8cA6H666 72 aa8.47□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Gm5629P06327 117 aa8.47□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Gata1P17679 413 aa8.47□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Hivep2Q3UHF7 2430 aa8.46□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 1520401A03RikA0A0J9YVH6 598 aa8.46□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Gm10518F6UQQ9 182 aa8.46□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Fgf6P21658 208 aa8.46□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 Gm9922Q8C3P1 144 aa8.46□□□□□ -1.05
Pcdhb17-201ENSMUST00000053856 BikO70337 150 aa8.46□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 MifP34884 115 aaKnown RBP8.46□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Ighv3-3A0A0A6YWL2 116 aa8.46□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Nav3Q80TN7 2359 aa8.46□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Znf239P24399 201 aa8.45□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Lypd6Q8BPP5 171 aa8.45□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Prrc2aQ7TSC1 2158 aaKnown RBP8.45□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Ebi3O35228 228 aa8.44□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Igkv1-122A0A140T8M9 119 aa8.44□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Brk1Q91VR8 75 aa8.44□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Gm20604F8WIA3 75 aa8.44□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Ighv1-61P01749 117 aa8.44□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Tcl1b5P56845 121 aa8.44□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Ighv8-12A0A0G2JDE1 119 aa8.44□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Cfc1P97766 202 aa8.44□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Gm5464Q3UY29 175 aa8.43□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Trav9n-4A0A075B631 113 aa8.43□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Tmem254aP0DN89 123 aa8.43□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Tmem254bP0DN90 123 aa8.43□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Tmem254cP0DN91 123 aa8.43□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 4930564D02RikQ9D4S4 103 aa8.43□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 BC067074F6RXI4 2391 aa8.43□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Gm9573F7C950 1606 aa8.43□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Spink8Q09TK9 105 aa8.42□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Znf580Q9DB38 172 aa8.42□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Igkv4-74A0A0B4J1I3 119 aa8.42□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Igkv3-10A0A0G2JGN0 119 aa8.42□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Q9DAQ5 155 aa8.42□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Col5a1O88207 1838 aa8.42□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Tanc2A2A690 1994 aa8.42□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Prh1P05142 261 aa8.42□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Gm28539A0A087WSL9 92 aa8.42□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Ighv2-6-8A0A0A6YWY9 116 aa8.42□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 P01747 120 aa8.42□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Igf1P05017 153 aa8.42□□□□□ -1.06
Pcdhb17-201ENSMUST00000053856 Ighv1-66A0A075B5X5 117 aa8.41□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 52.5 ms