RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Gm11444F6QMA6 170 aa13.93□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Ndufs7Q9DC70 224 aa13.93□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Gcn1E9PVA8 2671 aaKnown RBP13.92□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Gm29666A0A087WQ99 126 aa13.92□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Gm9887F6RFI0 207 aa13.92□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Psmb8P28063 276 aa13.92□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Lrcol1Q3URS3 161 aa13.92□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Eif4ebp1Q60876 117 aa13.92□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Ube2wQ8VDW4 151 aa13.92□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Lyrm7Q9DA03 104 aa13.92□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Lelp1Q9DAE3 120 aa13.92□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Gata1P17679 413 aa13.91□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Cox6cQ9CPQ1 76 aa13.91□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Igkv4-68A0A0B4J1I7 117 aa13.9□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Arid1bE9Q4N7 2244 aa13.9□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Gm9195A0A140LHT4 2805 aa13.9□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 A930009A15RikG3UYI6 118 aa13.9□□□□□ -0.18
Ccdc50-201ENSMUST00000039443 Ube2e2Q91W82 201 aa13.89□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 FlncQ8VHX6 2726 aaKnown RBP13.89□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 Atp5eP56382 52 aa13.89□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 Rbmy1bQ60990 380 aa13.89□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 Morn3Q8C5T4 241 aa13.88□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 Akap6E9Q9K8 2307 aa13.88□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 Glrp1E9Q9S8 174 aa13.88□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 Gm29423A0A087WRM1 55 aa13.87□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 B230217C12RikE9Q3Z1 139 aa13.87□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 Rmi2Q3UPE3 149 aa13.87□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 CenpwQ3URR0 86 aa13.87□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 Fhl2O70433 279 aa13.86□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 Trdv5A0A075B661 115 aa13.85□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 Gm21994F6T2D2 329 aa13.85□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 Ighv1-61P01749 117 aa13.85□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 CirbpP60824 172 aaKnown RBP13.85□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 Myo18bE9PV66 2605 aa13.84□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 Gm9747Q810H1 104 aa13.84□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 Rnf152Q8BG47 203 aa13.84□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 Gm9913Q8BQQ2 135 aa13.84□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 Gm17472A0A075B683 117 aa13.83□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 4930415O20RikQ8CDT5 131 aa13.83□□□□□ -0.19
Ccdc50-201ENSMUST00000039443 Atp5g3P56384 141 aa13.83□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Bahcc1Q3UHR0 2643 aa13.83□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Cops9Q3U898 57 aa13.82□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 SvipQ3UZP4 77 aa13.82□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Armcx4E9PWM3 2356 aa13.82□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 2310009B15RikA0A0A6YWI4 143 aa13.82□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 1700010B08RikQ9DAI7 102 aa13.82□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Gm20730A0A075B5J6 119 aa13.81□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Igkv4-91A0A075B5L2 119 aa13.81□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Trbv30A0A0B4J1P1 111 aa13.81□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Reg3gO09049 174 aa13.81□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Prr13Q9CQJ5 137 aa13.81□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Cep192E9Q4Y4 2514 aaKnown RBP13.8□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Zc2hc1bQ9D534 172 aa13.8□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Wdr38Q9D994 303 aa13.8□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Xlr5cQ9JJR2 179 aa13.8□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Gm10767Q3TQP0 103 aa13.79□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Celsr2Q9R0M0 2920 aa13.79□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Igkv4-78A0A0A6YYE5 119 aa13.79□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 P01786 117 aa13.79□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Trav7-6A0A075B640 112 aa13.78□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Tmem101Q91VP7 257 aa13.78□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Ankrd17Q99NH0 2603 aaKnown RBP13.78□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 Klk1b4P00757 256 aa13.78□□□□□ -0.2
Ccdc50-201ENSMUST00000039443 P01738 130 aa13.76□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 Fam110dQ80X91 271 aa13.76□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 AY761184Q9D848 116 aa13.76□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 Ankhd1E9PUR0 2548 aaKnown RBP13.76□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 Trav13d-1A0A075B606 110 aa13.76□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 Gm815Q3UWS2 115 aa13.76□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 Fxyd5P97808 178 aa13.75□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 Rif1Q6PR54 2419 aaKnown RBP13.75□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 4930470P17RikQ9D542 155 aa13.75□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 Fgf23Q9EPC2 251 aa13.75□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 Q99M08 65 aa13.75□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 Srsf12Q8C8K3 266 aa13.74□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 Phpt1Q9DAK9 124 aa13.74□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 4930432M17RikQ3V0W9 174 aa13.73□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 OtogO55225 2910 aa13.73□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 Gm28539A0A087WSL9 92 aa13.72□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 HampQ9EQ21 83 aa13.72□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 Prpf8Q99PV0 2335 aaKnown RBP13.72□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 Abca2P41234 2434 aa13.72□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 Ucn2Q99ML8 113 aa13.72□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 AngP21570 145 aa13.71□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 Ang3P97802 145 aa13.71□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 LrbaQ9ESE1 2856 aa13.71□□□□□ -0.21
Ccdc50-201ENSMUST00000039443 Trav9n-2A0A0G2JDP3 113 aa13.71□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 P01823 113 aa13.71□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Epg5Q80TA9 2572 aa13.7□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Gm10577Q3UDV9 132 aa13.7□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 SpinklQ8CEK3 90 aa13.7□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Svep1A2AVA0 3567 aa13.7□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Nhlrc1Q8BR37 401 aa13.69□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Gm904Q3V2L5 102 aa13.69□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Rnf183Q8QZS5 190 aa13.69□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Gm10251J3QPM5 127 aa13.68□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Foxc1Q61572 553 aa13.68□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Rpl36aP83882 106 aaKnown RBP13.68□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Gm11020F6ZGD5 61 aa13.66□□□□□ -0.22
Ccdc50-201ENSMUST00000039443 Eif4ebp3Q80VV3 101 aa13.66□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 90 ms