RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Usp24B1AY13 2617 aaKnown RBP8.56□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Muc2Q80Z19 2680 aa8.56□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Amn1B8JKV0 258 aa8.55□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Mrpl36Q99N90 102 aa8.55□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Pla2g2aP31482 146 aa8.55□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Pde6hP61249 83 aa8.55□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Ndufb4Q9CQC7 129 aa8.55□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Hist1h4aP62806 103 aaKnown RBP8.55□□□□□ -1.04
Sdc1-201ENSMUST00000020911 PemtQ61907 199 aa8.55□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Tmem263Q9DAM7 115 aa8.55□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Fam216aQ9DB54 251 aa8.55□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Atp6v0e1Q9CQD8 81 aa8.54□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Trav11A0A0B4J1J9 114 aa8.54□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Cela2aP05208 271 aa8.54□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Mpv17l2Q8VIK2 200 aa8.54□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Ankhd1E9PUR0 2548 aaKnown RBP8.54□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Ighv1-77A0A0G2JGS9 117 aa8.53□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Lmo4P61969 165 aa8.53□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Smim26Q3V460 107 aa8.53□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Ly6gP35461 111 aa8.53□□□□□ -1.04
Sdc1-201ENSMUST00000020911 B230307C23RikQ8BLB2 64 aa8.53□□□□□ -1.04
Sdc1-201ENSMUST00000020911 Igkv6-13A0A0G2JGY3 119 aa8.52□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Lelp1Q9DAE3 120 aa8.52□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Glrp1E9Q9S8 174 aa8.52□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Q9CX25 107 aa8.52□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Phpt1Q9DAK9 124 aa8.52□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Igkv4-57A0A0A6YYE7 117 aa8.51□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Rpl36-ps4A0A140T8U4 117 aa8.51□□□□□ -1.05
Sdc1-201ENSMUST00000020911 GhrhP16043 103 aa8.51□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Fhl1P97447 280 aaKnown RBP8.51□□□□□ -1.05
Sdc1-201ENSMUST00000020911 5730596B20RikQ8BQ08 205 aa8.51□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Dph3Q8K0W9 82 aa8.51□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Ighv3-4A0A0A6YXF1 117 aa8.51□□□□□ -1.05
Sdc1-201ENSMUST00000020911 LeprotO89013 131 aa8.51□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Ighv3-8A0A075B5T0 131 aa8.51□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Tmem14cQ9CQN6 114 aa8.51□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Ly6lH3BJG9 140 aa8.5□□□□□ -1.05
Sdc1-201ENSMUST00000020911 FcorP0DJI6 106 aa8.5□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Gcn1E9PVA8 2671 aaKnown RBP8.49□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Defa27F2Z403 93 aa8.49□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Gm9925F6T2U3 160 aa8.49□□□□□ -1.05
Sdc1-201ENSMUST00000020911 AngP21570 145 aa8.49□□□□□ -1.05
Sdc1-201ENSMUST00000020911 4930519P11RikQ9CUJ8 166 aa8.49□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Higd1aQ9JLR9 95 aa8.49□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Ly6hQ9WUC3 139 aa8.49□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Trav13d-1A0A075B606 110 aa8.49□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Nbl1Q61477 178 aa8.49□□□□□ -1.05
Sdc1-201ENSMUST00000020911 TrrapQ80YV3 2565 aaKnown RBP8.49□□□□□ -1.05
Sdc1-201ENSMUST00000020911 H2al1bA0A087WP11 105 aa8.49□□□□□ -1.05
Sdc1-201ENSMUST00000020911 H2al1kJ3QP08 105 aa8.49□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Hbb-b2P02089 147 aa8.49□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Zfand3Q497H0 227 aa8.49□□□□□ -1.05
Sdc1-201ENSMUST00000020911 H2al1eQ810S6 105 aa8.49□□□□□ -1.05
Sdc1-201ENSMUST00000020911 H2al1mQ9DAD9 105 aa8.49□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Tep1P97499 2629 aa8.48□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Igkv4-71A0A0G2JEH0 117 aa8.48□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Ccdc179J3QM76 67 aa8.48□□□□□ -1.05
Sdc1-201ENSMUST00000020911 4930535I16RikQ9CUI2 172 aa8.48□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Edn3P48299 214 aa8.48□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Ucn2Q99ML8 113 aa8.48□□□□□ -1.05
Sdc1-201ENSMUST00000020911 P01820 115 aa8.47□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Hivep2Q3UHF7 2430 aa8.47□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Nav3Q80TN7 2359 aa8.47□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Gm17472A0A075B683 117 aa8.47□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Gm5941Q497P9 117 aa8.47□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Dnal4Q9DCM4 105 aa8.47□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Trav4-3A0A0B4J1K1 110 aa8.47□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Ang2Q64438 145 aa8.47□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Minos1Q7TNS2 76 aa8.47□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Tm2d2Q8R0I4 213 aa8.47□□□□□ -1.05
Sdc1-201ENSMUST00000020911 Rpl28P41105 137 aaKnown RBP8.46□□□□□ -1.05
Sdc1-201ENSMUST00000020911 FshbQ60687 130 aa8.46□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Rpl11Q9CXW4 178 aaKnown RBP8.46□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Pla2g2dQ9WVF6 144 aa8.46□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Znf580Q9DB38 172 aa8.45□□□□□ -1.06
Sdc1-201ENSMUST00000020911 OtogO55225 2910 aa8.45□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Celsr2Q9R0M0 2920 aa8.45□□□□□ -1.06
Sdc1-201ENSMUST00000020911 BC025920Q3US60 128 aa8.45□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Tmem223Q9CQE2 199 aaKnown RBP8.45□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Gm10521E9PZK0 135 aa8.45□□□□□ -1.06
Sdc1-201ENSMUST00000020911 A530084C06RikQ3UTW2 186 aa8.45□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Fam19a4Q7TPG5 135 aa8.45□□□□□ -1.06
Sdc1-201ENSMUST00000020911 4930556J24RikQ9D4U7 146 aa8.45□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Obox8V9GWY9 217 aa8.45□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Gm15557A6PWY0 234 aa8.44□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Crlf1Q9JM58 425 aa8.44□□□□□ -1.06
Sdc1-201ENSMUST00000020911 P01747 120 aa8.44□□□□□ -1.06
Sdc1-201ENSMUST00000020911 P01748 117 aa8.44□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Ighv1-62-3P01754 117 aa8.44□□□□□ -1.06
Sdc1-201ENSMUST00000020911 BlcapP62951 87 aa8.44□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Ighv5-9-1A0A0A6YVS4 126 aa8.43□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Igkv4-74A0A0B4J1I3 119 aa8.43□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Ang3P97802 145 aa8.43□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Igkv1-35A0A0G2JDE5 120 aa8.43□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Timm17aQ9Z0V8 171 aa8.43□□□□□ -1.06
Sdc1-201ENSMUST00000020911 BikO70337 150 aa8.43□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Gm5153P01627 120 aa8.43□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Fam229bQ8CF36 80 aa8.43□□□□□ -1.06
Sdc1-201ENSMUST00000020911 Znf414Q9DCK4 299 aa8.43□□□□□ -1.06
Sdc1-201ENSMUST00000020911 HampQ9EQ21 83 aa8.43□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 74.4 ms