RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Gm37988J3QM41 62 aa9.49□□□□□ -0.89
Msh6-201ENSMUST00000005503 MplkipQ9D011 178 aa9.49□□□□□ -0.89
Msh6-201ENSMUST00000005503 Zfp951A0A087WRH0 451 aa9.49□□□□□ -0.89
Msh6-201ENSMUST00000005503 E130218I03RikA0A0U1RNU5 63 aa9.49□□□□□ -0.89
Msh6-201ENSMUST00000005503 Gm21748Q3UE70 102 aa9.49□□□□□ -0.89
Msh6-201ENSMUST00000005503 March3Q8BRX9 218 aa9.49□□□□□ -0.89
Msh6-201ENSMUST00000005503 Gm3285A0A1W2P7U0 201 aa9.48□□□□□ -0.89
Msh6-201ENSMUST00000005503 Tmem86bQ497J1 226 aa9.48□□□□□ -0.89
Msh6-201ENSMUST00000005503 Ighv1-75A0A075B5Y2 117 aa9.48□□□□□ -0.89
Msh6-201ENSMUST00000005503 Col4a2P08122 1707 aa9.48□□□□□ -0.89
Msh6-201ENSMUST00000005503 Hcfc1Q61191 2045 aaKnown RBP9.48□□□□□ -0.89
Msh6-201ENSMUST00000005503 Fbn2Q61555 2907 aa9.48□□□□□ -0.89
Msh6-201ENSMUST00000005503 Dmxl1Q6PNC0 3013 aa9.48□□□□□ -0.89
Msh6-201ENSMUST00000005503 Tcte2E9PY37 120 aa9.47□□□□□ -0.89
Msh6-201ENSMUST00000005503 Socs3O35718 225 aa9.47□□□□□ -0.89
Msh6-201ENSMUST00000005503 Taf15Q8BQ46 557 aaKnown RBP9.47□□□□□ -0.89
Msh6-201ENSMUST00000005503 1700056E22RikF7CNM6 234 aa9.47□□□□□ -0.89
Msh6-201ENSMUST00000005503 Sprr3O09116 238 aa9.47□□□□□ -0.89
Msh6-201ENSMUST00000005503 KalrnA2CG49 2964 aa9.47□□□□□ -0.89
Msh6-201ENSMUST00000005503 Fam222aQ6PGH4 453 aa9.46□□□□□ -0.89
Msh6-201ENSMUST00000005503 Wdr38Q9D994 303 aa9.46□□□□□ -0.89
Msh6-201ENSMUST00000005503 Celsr1O35161 3034 aa9.46□□□□□ -0.89
Msh6-201ENSMUST00000005503 Ighv12-3A0A075B5T1 117 aa9.46□□□□□ -0.9
Msh6-201ENSMUST00000005503 Igkv4-68A0A0B4J1I7 117 aa9.46□□□□□ -0.9
Msh6-201ENSMUST00000005503 Cox7a1P56392 80 aa9.46□□□□□ -0.9
Msh6-201ENSMUST00000005503 Il19Q8CJ70 176 aa9.46□□□□□ -0.9
Msh6-201ENSMUST00000005503 Ighv2-3A0A075B696 115 aa9.45□□□□□ -0.9
Msh6-201ENSMUST00000005503 Igkv4-59A0A0B4J1I8 117 aa9.45□□□□□ -0.9
Msh6-201ENSMUST00000005503 Igkv1-35A0A0G2JDE5 120 aa9.45□□□□□ -0.9
Msh6-201ENSMUST00000005503 Vmo1Q5SXG7 201 aa9.45□□□□□ -0.9
Msh6-201ENSMUST00000005503 Lage3Q9CR70 148 aa9.45□□□□□ -0.9
Msh6-201ENSMUST00000005503 Polr2kQ63871 58 aa9.45□□□□□ -0.9
Msh6-201ENSMUST00000005503 CnfnQ6PCW6 111 aa9.45□□□□□ -0.9
Msh6-201ENSMUST00000005503 B230307C23RikQ8BLB2 64 aa9.45□□□□□ -0.9
Msh6-201ENSMUST00000005503 Mfap4Q9D1H9 257 aa9.45□□□□□ -0.9
Msh6-201ENSMUST00000005503 Cox8cA6H666 72 aa9.45□□□□□ -0.9
Msh6-201ENSMUST00000005503 PemtQ61907 199 aa9.45□□□□□ -0.9
Msh6-201ENSMUST00000005503 Ighv8-5A0A0A6YY60 119 aa9.45□□□□□ -0.9
Msh6-201ENSMUST00000005503 Igkv4-53A0A0G2JFC6 119 aa9.45□□□□□ -0.9
Msh6-201ENSMUST00000005503 Pglyrp4Q0VB07 374 aa9.45□□□□□ -0.9
Msh6-201ENSMUST00000005503 Trav4d-3A0A075B625 110 aa9.44□□□□□ -0.9
Msh6-201ENSMUST00000005503 Trav13-4-dv7A0A075B6C2 110 aa9.44□□□□□ -0.9
Msh6-201ENSMUST00000005503 4930470P17RikQ9D542 155 aa9.44□□□□□ -0.9
Msh6-201ENSMUST00000005503 Crip3Q6Q6R3 243 aa9.44□□□□□ -0.9
Msh6-201ENSMUST00000005503 Cox17P56394 63 aa9.44□□□□□ -0.9
Msh6-201ENSMUST00000005503 Smim26Q3V460 107 aa9.43□□□□□ -0.9
Msh6-201ENSMUST00000005503 B230359F08RikA0A0B4J1K3 109 aa9.43□□□□□ -0.9
Msh6-201ENSMUST00000005503 Igkv8-16A0A0G2JDG9 121 aa9.43□□□□□ -0.9
Msh6-201ENSMUST00000005503 Ighv1-72P01751 139 aa9.43□□□□□ -0.9
Msh6-201ENSMUST00000005503 Trav13n-2A0A0G2JF93 110 aa9.42□□□□□ -0.9
Msh6-201ENSMUST00000005503 Ighv1-85A0A075B5Y6 117 aa9.42□□□□□ -0.9
Msh6-201ENSMUST00000005503 Lamtor3O88653 124 aa9.42□□□□□ -0.9
Msh6-201ENSMUST00000005503 Ighv1-66A0A075B5X5 117 aa9.42□□□□□ -0.9
Msh6-201ENSMUST00000005503 Igkv8-24A0A140T8P5 121 aa9.42□□□□□ -0.9
Msh6-201ENSMUST00000005503 Cdk2ap2Q9CPY4 127 aa9.42□□□□□ -0.9
Msh6-201ENSMUST00000005503 Trav13-1A0A075B644 110 aa9.42□□□□□ -0.9
Msh6-201ENSMUST00000005503 P01802 115 aa9.42□□□□□ -0.9
Msh6-201ENSMUST00000005503 Ube2d1P61080 147 aaKnown RBP9.42□□□□□ -0.9
Msh6-201ENSMUST00000005503 Ighv1-11A0A0A6YWI9 117 aa9.41□□□□□ -0.9
Msh6-201ENSMUST00000005503 Trav13d-4A0A0G2JFX3 110 aa9.41□□□□□ -0.9
Msh6-201ENSMUST00000005503 Pglyrp1O88593 182 aa9.41□□□□□ -0.9
Msh6-201ENSMUST00000005503 Crlf1Q9JM58 425 aa9.41□□□□□ -0.9
Msh6-201ENSMUST00000005503 Gm28539A0A087WSL9 92 aa9.41□□□□□ -0.9
Msh6-201ENSMUST00000005503 1520401A03RikA0A0J9YVH6 598 aa9.41□□□□□ -0.9
Msh6-201ENSMUST00000005503 Tmem243B2RVB9 118 aa9.4□□□□□ -0.9
Msh6-201ENSMUST00000005503 Sh2d1aO88890 126 aa9.4□□□□□ -0.9
Msh6-201ENSMUST00000005503 Ly6hQ9WUC3 139 aa9.4□□□□□ -0.9
Msh6-201ENSMUST00000005503 AngP21570 145 aa9.4□□□□□ -0.91
Msh6-201ENSMUST00000005503 Ighv3-3A0A0A6YWL2 116 aa9.39□□□□□ -0.91
Msh6-201ENSMUST00000005503 PlaurP35456 327 aa9.39□□□□□ -0.91
Msh6-201ENSMUST00000005503 Trav13-2A0A075B649 110 aa9.39□□□□□ -0.91
Msh6-201ENSMUST00000005503 Reg3dQ9QUS9 175 aa9.39□□□□□ -0.91
Msh6-201ENSMUST00000005503 Defa27F2Z403 93 aa9.39□□□□□ -0.91
Msh6-201ENSMUST00000005503 Spry2Q9QXV8 315 aa9.39□□□□□ -0.91
Msh6-201ENSMUST00000005503 Cox6b1P56391 86 aaKnown RBP9.38□□□□□ -0.91
Msh6-201ENSMUST00000005503 Gphb5Q812B2 130 aa9.38□□□□□ -0.91
Msh6-201ENSMUST00000005503 Q99M08 65 aa9.38□□□□□ -0.91
Msh6-201ENSMUST00000005503 Gcn1E9PVA8 2671 aaKnown RBP9.38□□□□□ -0.91
Msh6-201ENSMUST00000005503 Defa28D3Z1V9 94 aa9.38□□□□□ -0.91
Msh6-201ENSMUST00000005503 Ubl5Q9EPV8 73 aa9.38□□□□□ -0.91
Msh6-201ENSMUST00000005503 PtprqP0C5E4 2300 aa9.38□□□□□ -0.91
Msh6-201ENSMUST00000005503 Trav11A0A0B4J1J9 114 aa9.37□□□□□ -0.91
Msh6-201ENSMUST00000005503 Znf575Q3TXZ1 239 aa9.37□□□□□ -0.91
Msh6-201ENSMUST00000005503 1700010B08RikQ9DAI7 102 aa9.37□□□□□ -0.91
Msh6-201ENSMUST00000005503 Crip2Q9DCT8 208 aaKnown RBP9.37□□□□□ -0.91
Msh6-201ENSMUST00000005503 Trav14d-3-dv8A0A075B619 120 aa9.37□□□□□ -0.91
Msh6-201ENSMUST00000005503 Unc79Q0KK59 2596 aa9.37□□□□□ -0.91
Msh6-201ENSMUST00000005503 Igf1P05017 153 aa9.37□□□□□ -0.91
Msh6-201ENSMUST00000005503 Atp5eP56382 52 aa9.37□□□□□ -0.91
Msh6-201ENSMUST00000005503 Cyyr1Q8VIH7 165 aa9.37□□□□□ -0.91
Msh6-201ENSMUST00000005503 MifP34884 115 aaKnown RBP9.36□□□□□ -0.91
Msh6-201ENSMUST00000005503 Gm9913Q8BQQ2 135 aa9.36□□□□□ -0.91
Msh6-201ENSMUST00000005503 Igkv4-61A0A0G2JH00 117 aa9.36□□□□□ -0.91
Msh6-201ENSMUST00000005503 Epg5Q80TA9 2572 aa9.36□□□□□ -0.91
Msh6-201ENSMUST00000005503 Ube2d3P61079 147 aa9.36□□□□□ -0.91
Msh6-201ENSMUST00000005503 Ube2d2P62838 147 aa9.36□□□□□ -0.91
Msh6-201ENSMUST00000005503 Igkv2-109A0A075B5K6 120 aa9.35□□□□□ -0.91
Msh6-201ENSMUST00000005503 Gm10135F6TEE5 83 aa9.35□□□□□ -0.91
Msh6-201ENSMUST00000005503 P01823 113 aa9.35□□□□□ -0.91
Msh6-201ENSMUST00000005503 Igkv3-1A0A075B5P1 119 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 70.5 ms