RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 RetnQ99P87 114 aa9.99□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Gm5878E9PUB3 99 aa9.99□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Rpl36aP83882 106 aaKnown RBP9.99□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Srsf2Q62093 221 aaKnown RBP9.99□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Tnfrsf23Q9ER63 176 aa9.99□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Zzef1Q5SSH7 2924 aa9.98□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 SpenQ62504 3644 aaKnown RBP9.98□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Gm17455G3UW87 128 aa9.98□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Ighv12-3A0A075B5T1 117 aa9.98□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Gemin7Q9CWY4 129 aa9.98□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Dpm2Q9Z324 84 aa9.98□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Hoxd3P09027 433 aa9.97□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Gm16223Q8CBM3 117 aa9.97□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 SNORCQ9CXL7 121 aa9.97□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Ubr5Q80TP3 2792 aa9.97□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Gm20730A0A075B5J6 119 aa9.97□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Tcrg-C1A0A075B5Z0 172 aa9.97□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Gm20499D3Z4G5 72 aa9.97□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 P01896 185 aa9.97□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Dmrt3Q80WT2 476 aa9.97□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Il19Q8CJ70 176 aa9.97□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Tcf24V9GWT9 166 aa9.97□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Iglc1A0A0G2JE99 106 aa9.97□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 P01843 105 aa9.97□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Rnf185Q91YT2 192 aa9.96□□□□□ -0.81
Pdgfra-205ENSMUST00000201711 Trav9d-3A0A075B695 113 aa9.96□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 F11rO88792 300 aa9.96□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Spata25Q9DA57 226 aa9.96□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Prelid3aQ8VE85 172 aa9.96□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Fgf6P21658 208 aa9.95□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Usp24B1AY13 2617 aaKnown RBP9.95□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Gm42674D3YUT9 64 aa9.95□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Ndufa1O35683 70 aa9.95□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 CckP09240 115 aa9.95□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 C1qcQ02105 246 aa9.95□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Rnf183Q8QZS5 190 aa9.95□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Nop10Q9CQS2 64 aa9.95□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Spink12Q9D256 87 aa9.95□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Ighv2-3A0A075B696 115 aa9.95□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Lect2O88803 151 aa9.95□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 TshbP12656 138 aa9.95□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Fam19a4Q7TPG5 135 aa9.95□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 LhbO09108 141 aa9.94□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Prh1P05142 261 aa9.94□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Notch1Q01705 2531 aa9.94□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Gm29423A0A087WRM1 55 aa9.94□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 P84751 237 aa9.94□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 4930470P17RikQ9D542 155 aa9.94□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Gm12057A0A087WR21 115 aa9.93□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 1500011B03RikQ3TTH7 73 aa9.93□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Cox6cQ9CPQ1 76 aa9.93□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Gm10226O88253 85 aa9.93□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Foxi2Q3I5G5 311 aa9.93□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Samd5Q3V1H9 173 aa9.92□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Ucn2Q99ML8 113 aa9.92□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Defb2P82020 71 aa9.92□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Defa20Q45VN2 95 aa9.92□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 P18527 97 aa9.92□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Snai3Q9QY31 287 aa9.92□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 1700056E22RikF7CNM6 234 aa9.92□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Trav4n-4A0A075B615 110 aa9.91□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Igkv4-70A0A0B4J1I5 116 aa9.91□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Rnf114Q9ET26 229 aa9.91□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Gm9195A0A140LHT4 2805 aa9.91□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Igkv4-59A0A0B4J1I8 117 aa9.91□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Rnase1P00683 149 aa9.91□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Runx1Q03347 451 aa9.91□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Odf3Q920N1 254 aa9.91□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Igkv4-71A0A0G2JEH0 117 aa9.9□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Fam222aQ6PGH4 453 aa9.9□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Spink10Q8CAC8 162 aa9.9□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 NipblQ6KCD5 2798 aaKnown RBP9.9□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Dnal4Q9DCM4 105 aa9.9□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 FlncQ8VHX6 2726 aaKnown RBP9.9□□□□□ -0.82
Pdgfra-205ENSMUST00000201711 Trav13d-1A0A075B606 110 aa9.9□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Gm1968Q3T9I3 115 aa9.9□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Pfn2Q9JJV2 140 aa9.9□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Rmi2Q3UPE3 149 aa9.89□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Trav7d-3Q5R1I1 112 aa9.89□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Gata3P23772 443 aa9.89□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Phpt1Q9DAK9 124 aa9.89□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Odf1Q61999 247 aa9.89□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Gm44965A0A0N4SVR3 59 aa9.88□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Lyzl4Q9D925 145 aa9.88□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 1520401A03RikA0A0J9YVH6 598 aa9.88□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 P01837 106 aa9.87□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Gm6793B2RXM2 351 aa9.87□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Prr9Q8BV84 116 aa9.87□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Mpv17l2Q8VIK2 200 aa9.87□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 MrapQ9D159 127 aa9.87□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Cox7a1P56392 80 aa9.87□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Itpr3P70227 2670 aa9.87□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 C920008G01RikA0A0B4J1N1 112 aa9.87□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Gm14137Q8CE97 175 aa9.87□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Vps13cQ8BX70 3748 aa9.86□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Igkv1-99F6XWB2 120 aa9.86□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Dand5Q76LW6 185 aa9.86□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Prss58Q8BW11 241 aa9.86□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Fam216aQ9DB54 251 aa9.86□□□□□ -0.83
Pdgfra-205ENSMUST00000201711 Cox8cA6H666 72 aa9.85□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 119.9 ms