RNA–Protein interactions for RNA: ENSMUST00000130871.1

Gm28043-201, Transcript of E3 ubiquitin-protein ligase RNF8, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Gm28043, Length 6,521 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043-201ENSMUST00000130871 Trav13d-1A0A075B606 110 aa9.83□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Col8a2P25318 699 aa9.83□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Cdpf1Q8R3A2 119 aa9.83□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Parp4E9PYK3 1969 aa9.83□□□□□ -0.84
Gm28043-201ENSMUST00000130871 PtprqP0C5E4 2300 aa9.83□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Gm42674D3YUT9 64 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 P84751 237 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Anapc1P53995 1944 aaKnown RBP9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Pkd1l2Q7TN88 2461 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Zfand3Q497H0 227 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Tcf20Q9EPQ8 1987 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Pcdh15Q99PJ1 1943 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Odf3l1Q810P2 275 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Gm9913Q8BQQ2 135 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Cox7b2Q9D2H1 82 aa9.82□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Gm17472A0A075B683 117 aa9.81□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Ttc28Q80XJ3 2450 aa9.81□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Gm21060J3KMU4 56 aa9.81□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Igkv1-88A0A140T8N1 120 aa9.81□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Trav11A0A0B4J1J9 114 aa9.81□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Acyp1P56376 99 aa9.81□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Spink8Q09TK9 105 aa9.8□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Eml6Q5SQM0 1958 aa9.8□□□□□ -0.84
Gm28043-201ENSMUST00000130871 1700010B08RikQ9DAI7 102 aa9.8□□□□□ -0.84
Gm28043-201ENSMUST00000130871 AngP21570 145 aa9.8□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Igkv8-18A0A0B4J1J3 123 aa9.8□□□□□ -0.84
Gm28043-201ENSMUST00000130871 AvpP35455 168 aa9.8□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Gm14137Q8CE97 175 aa9.8□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Tmem223Q9CQE2 199 aaKnown RBP9.8□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Fgf6P21658 208 aa9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 9430069I07RikQ9CX21 111 aa9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Prrc2aQ7TSC1 2158 aaKnown RBP9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Iglv1A0A075B663 117 aa9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 P0C913 63 aa9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 B9d2Q3UK10 175 aa9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Ramp1Q9WTJ5 148 aa9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Ighv1-11A0A0A6YWI9 117 aa9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Ndufa4l2Q4FZG9 87 aa9.79□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Gm26602M0QWA4 95 aa9.78□□□□□ -0.84
Gm28043-201ENSMUST00000130871 P01658 132 aa9.78□□□□□ -0.84
Gm28043-201ENSMUST00000130871 AcanQ61282 2132 aaKnown RBP9.78□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Igkv2-109A0A075B5K6 120 aa9.78□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Trav13-1A0A075B644 110 aa9.78□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Gm9958Q8C9U4 106 aa9.78□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Trav13n-2A0A0G2JF93 110 aa9.77□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Klk12B2RVZ0 247 aa9.77□□□□□ -0.84
Gm28043-201ENSMUST00000130871 Gm10542F6XDR3 90 aa9.77□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Gm5468Q8C3D3 155 aa9.77□□□□□ -0.85
Gm28043-201ENSMUST00000130871 1700012A03RikQ9DAF1 130 aa9.77□□□□□ -0.85
Gm28043-201ENSMUST00000130871 AW146154Q3TPQ7 468 aa9.77□□□□□ -0.85
Gm28043-201ENSMUST00000130871 P01674 108 aa9.77□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Odf3Q920N1 254 aa9.77□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Reg3bP35230 175 aa9.76□□□□□ -0.85
Gm28043-201ENSMUST00000130871 P06328 117 aa9.76□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Arhgap21Q6DFV3 1944 aa9.76□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Trav13-4-dv7A0A075B6C2 110 aa9.76□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Rnase1P00683 149 aa9.76□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Gm5878E9PUB3 99 aa9.76□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Igkv3-10A0A0G2JGN0 119 aa9.76□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Q9D131 166 aa9.76□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Brk1Q91VR8 75 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 4930470P17RikQ9D542 155 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Tax1bp3Q9DBG9 124 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Ormdl1Q921I0 153 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 HelzQ6DFV5 1964 aaKnown RBP9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Abca2P41234 2434 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Ighv2-6A0A075B6A7 116 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 B230359F08RikA0A0B4J1K3 109 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Fam222aQ6PGH4 453 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Klk5Q9D140 293 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Snai3Q9QY31 287 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Gm12353A2AGJ4 60 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Higd2aQ9CQJ1 106 aa9.75□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Igkv1-35A0A0G2JDE5 120 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 CrygdP04342 174 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Gm10735Q3US96 136 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Gm3618D3Z4P5 127 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 BikO70337 150 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 MgamB5THE2 1827 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 DysfQ9ESD7 2090 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Q9CX25 107 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 TectaO08523 2155 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Gm17577J3QNF7 156 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Mrpl52Q9D0Y8 121 aa9.74□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Gm37389A0A0A6YW05 95 aa9.73□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Tmem254aP0DN89 123 aa9.73□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Tmem254bP0DN90 123 aa9.73□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Tmem254cP0DN91 123 aa9.73□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Defb12Q8K4N3 78 aa9.73□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Ube2aQ9Z255 152 aa9.73□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Igkv3-5A0A140T8M6 119 aa9.73□□□□□ -0.85
Gm28043-201ENSMUST00000130871 NrgnP60761 78 aa9.73□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Ebi3O35228 228 aa9.72□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Fxyd5P97808 178 aa9.72□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Atp5eP56382 52 aa9.72□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Sprr3O09116 238 aa9.72□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Pde6gP09174 87 aa9.72□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Pip4p1Q3TWL2 284 aa9.72□□□□□ -0.85
Gm28043-201ENSMUST00000130871 Gm44965A0A0N4SVR3 59 aa9.71□□□□□ -0.85
Gm28043-201ENSMUST00000130871 P01820 115 aa9.71□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms