RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Rnf152Q8BG47 203 aa18.1■□□□□ 0.49
Cldnd1-201ENSMUST00000023426 Cysltr1Q99JA4 352 aa18.1■□□□□ 0.49
Cldnd1-201ENSMUST00000023426 Gm45717A0A1B0GT68 152 aa18.1■□□□□ 0.49
Cldnd1-201ENSMUST00000023426 B230217C12RikE9Q3Z1 139 aa18.1■□□□□ 0.49
Cldnd1-201ENSMUST00000023426 Trav7-2Q5R1I3 112 aa18.1■□□□□ 0.49
Cldnd1-201ENSMUST00000023426 A530064D06RikQ8BNV8 229 aa18.1■□□□□ 0.49
Cldnd1-201ENSMUST00000023426 Gm21370Q3T9V6 190 aa18.09■□□□□ 0.49
Cldnd1-201ENSMUST00000023426 Ighv2-6-8A0A0A6YWY9 116 aa18.08■□□□□ 0.49
Cldnd1-201ENSMUST00000023426 LeprotO89013 131 aa18.08■□□□□ 0.49
Cldnd1-201ENSMUST00000023426 Fam110dQ80X91 271 aa18.08■□□□□ 0.49
Cldnd1-201ENSMUST00000023426 AY761184Q9D848 116 aa18.08■□□□□ 0.49
Cldnd1-201ENSMUST00000023426 Ndufs7Q9DC70 224 aa18.08■□□□□ 0.49
Cldnd1-201ENSMUST00000023426 Usp9xP70398 2559 aaKnown RBP18.08■□□□□ 0.49
Cldnd1-201ENSMUST00000023426 Ccl25O35903 144 aa18.08■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Dmrt3Q80WT2 476 aa18.07■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Ankrd39Q9D2X0 183 aa18.07■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 AngP21570 145 aa18.07■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Ube2d1P61080 147 aaKnown RBP18.07■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 LrbaQ9ESE1 2856 aa18.06■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Smim10l1A0A087WNQ7 89 aa18.06■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Srp14P16254 110 aaKnown RBP18.05■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Cox11Q6P8I6 275 aa18.05■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Mpv17l2Q8VIK2 200 aa18.05■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Gemin7Q9CWY4 129 aa18.05■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Gcn1E9PVA8 2671 aaKnown RBP18.05■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Defa37K9J724 93 aa18.05■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Defa5P28312 93 aa18.05■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Atp5lQ9CPQ8 103 aa18.05■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Gm6812B1AXU1 112 aa18.04■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Fam240bJ3QMB3 78 aa18.04■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Hectd1Q69ZR2 2618 aaKnown RBP18.04■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Gata1P17679 413 aa18.04■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Fam19a4Q7TPG5 135 aa18.04■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Celsr2Q9R0M0 2920 aa18.03■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Akap6E9Q9K8 2307 aa18.03■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Tep1P97499 2629 aa18.03■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Defb2P82020 71 aa18.03■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Try10Q792Z1 246 aaKnown RBP18.03■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Srsf9Q9D0B0 222 aaKnown RBP18.03■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 Avpi1Q9D7H4 142 aa18.03■□□□□ 0.48
Cldnd1-201ENSMUST00000023426 P01741 114 aa18.02■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Triap1Q9D8Z2 76 aa18.02■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Pgpep1Q9ESW8 209 aa18.02■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Slamf6Q9ET39 351 aa18.02■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Gm26920S4R2A5 56 aa18.02■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 OdaphJ3QNT8 126 aa18.01■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 P01738 130 aa18.01■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Gm815Q3UWS2 115 aa18.01■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Ociad2Q9D8W7 154 aa18.01■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Gm28044L7N1X0 119 aa18■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Q99M08 65 aa17.99■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Tmem263Q9DAM7 115 aa17.99■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 3110070M22RikQ9DAQ7 118 aa17.99■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Muc2Q80Z19 2680 aa17.99■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Tcrg-C1A0A075B5Z0 172 aa17.99■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Arid1bE9Q4N7 2244 aa17.99■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 BC067074F6RXI4 2391 aa17.98■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Tac4Q99N14 128 aa17.98■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Gm7075D3Z497 112 aa17.97■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 PolP10400 120 aa17.97■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Gata3P23772 443 aa17.97■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Ighv8-5A0A0A6YY60 119 aa17.96■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Rpl24Q8BP67 157 aaKnown RBP17.96■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Mrpl35Q9CQL6 188 aa17.96■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Ighv1-11A0A0A6YWI9 117 aa17.96■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Spink13Q3UTS8 97 aa17.96■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Eif4ebp1Q60876 117 aa17.96■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Ankrd17Q99NH0 2603 aaKnown RBP17.96■□□□□ 0.47
Cldnd1-201ENSMUST00000023426 Crip2Q9DCT8 208 aaKnown RBP17.95■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Nav3Q80TN7 2359 aa17.95■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Gatd1Q8BFQ8 220 aa17.95■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 HampQ9EQ21 83 aa17.95■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Zfyve26Q5DU37 2529 aa17.94■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Trav9n-2A0A0G2JDP3 113 aa17.94■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Gm10322F7D7I4 111 aa17.94■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Hint1P70349 126 aaKnown RBP17.94■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Cfap126Q6P8X9 189 aa17.94■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 BC106179Q8C9L1 186 aa17.94■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Tspan13Q9D8C2 204 aa17.94■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Fxyd5P97808 178 aa17.93■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Ighv8-12A0A0G2JDE1 119 aa17.92■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Ighv1-72P01751 139 aa17.92■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Defb26Q30KN7 186 aa17.92■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Gm17472A0A075B683 117 aa17.92■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Bahcc1Q3UHR0 2643 aa17.91■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Igkv4-91A0A075B5L2 119 aa17.91■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Defa3P28310 93 aa17.91■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Defa10P50708 93 aa17.91■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Defa15P50713 93 aa17.91■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Ube2d3P61079 147 aa17.9■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Ube2d2P62838 147 aa17.9■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Gm9922Q8C3P1 144 aa17.9■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 HilpdaQ9JLS0 64 aa17.9■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Phlda3Q9WV95 125 aa17.9■□□□□ 0.46
Cldnd1-201ENSMUST00000023426 Gm933J3QPC1 141 aa17.89■□□□□ 0.45
Cldnd1-201ENSMUST00000023426 Defb42Q8BVB5 75 aa17.89■□□□□ 0.45
Cldnd1-201ENSMUST00000023426 Tmem238A9JSM3 176 aa17.89■□□□□ 0.45
Cldnd1-201ENSMUST00000023426 Defa24Q5G865 93 aa17.89■□□□□ 0.45
Cldnd1-201ENSMUST00000023426 Mfap4Q9D1H9 257 aa17.88■□□□□ 0.45
Cldnd1-201ENSMUST00000023426 Esp24A8R0V6 68 aa17.87■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms