RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Ss18Q62280 418 aa7.18□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Prss58Q8BW11 241 aa7.18□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Ighv1-82A0A0G2JEU7 117 aa7.18□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Gm21994F6T2D2 329 aa7.18□□□□□ -1.26
Col6a1-201ENSMUST00000001147 TshbP12656 138 aa7.18□□□□□ -1.26
Col6a1-201ENSMUST00000001147 A130051J06RikQ8CAU1 227 aa7.18□□□□□ -1.26
Col6a1-201ENSMUST00000001147 P01820 115 aa7.18□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Defb26Q30KN7 186 aa7.18□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Il19Q8CJ70 176 aa7.18□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Gm2564F6Z9S8 108 aa7.17□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Ly86O88188 162 aa7.17□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Gata4Q08369 441 aa7.17□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Foxc1Q61572 553 aa7.17□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Mapk1ip1lQ8BH93 242 aa7.17□□□□□ -1.26
Col6a1-201ENSMUST00000001147 BB014433Q8C5R5 389 aa7.17□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Trav4n-4A0A075B615 110 aa7.17□□□□□ -1.26
Col6a1-201ENSMUST00000001147 P06328 117 aa7.17□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Atp5eP56382 52 aa7.17□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Odf3Q920N1 254 aa7.17□□□□□ -1.26
Col6a1-201ENSMUST00000001147 GalmQ8K157 342 aa7.17□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Ccl24Q9JKC0 119 aa7.17□□□□□ -1.26
Col6a1-201ENSMUST00000001147 P01837 106 aa7.16□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Rpl32P62911 135 aaKnown RBP7.16□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Rbmy1bQ60990 380 aa7.16□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Ndufb4Q9CQC7 129 aa7.16□□□□□ -1.26
Col6a1-201ENSMUST00000001147 C920008G01RikA0A0B4J1N1 112 aa7.16□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Xcl1P47993 114 aa7.16□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Srsf2Q62093 221 aaKnown RBP7.16□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Il1f10Q8R459 152 aa7.16□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Gm20730A0A075B5J6 119 aa7.16□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Samd13D3YUG0 102 aa7.16□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Defa28D3Z1V9 94 aa7.16□□□□□ -1.26
Col6a1-201ENSMUST00000001147 ColqO35348 457 aa7.16□□□□□ -1.26
Col6a1-201ENSMUST00000001147 P01753 117 aa7.16□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Vwc2lQ505H4 222 aa7.16□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Synj2bpQ9D6K5 145 aa7.16□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Reg3gO09049 174 aa7.15□□□□□ -1.26
Col6a1-201ENSMUST00000001147 SpinklQ8CEK3 90 aa7.15□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Ndufs7Q9DC70 224 aa7.15□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Gm20726G3UX18 150 aa7.15□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Hbb-b2P02089 147 aa7.15□□□□□ -1.26
Col6a1-201ENSMUST00000001147 March3Q8BRX9 218 aa7.15□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Defa21Q8C1P2 93 aa7.15□□□□□ -1.26
Col6a1-201ENSMUST00000001147 Zfp951A0A087WRH0 451 aa7.15□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Gm20499D3Z4G5 72 aa7.15□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Defb47Q30KN1 79 aa7.15□□□□□ -1.27
Col6a1-201ENSMUST00000001147 RelnQ60841 3461 aa7.14□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Prp2P05143 317 aa7.14□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Ighv2-7A0A075B5Q8 116 aa7.14□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Gm37988J3QM41 62 aa7.14□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Fam19a4Q7TPG5 135 aa7.14□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Gm5629P06327 117 aa7.14□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Hoxd3P09027 433 aa7.14□□□□□ -1.27
Col6a1-201ENSMUST00000001147 1500011B03RikQ3TTH7 73 aa7.14□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Znf575Q3TXZ1 239 aa7.14□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Gm14137Q8CE97 175 aa7.14□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Lgals4Q8K419 326 aa7.14□□□□□ -1.27
Col6a1-201ENSMUST00000001147 1700056E22RikF7CNM6 234 aa7.13□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Rmi2Q3UPE3 149 aa7.13□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Hist1h4aP62806 103 aaKnown RBP7.13□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Triap1Q9D8Z2 76 aa7.13□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Ankrd11E9Q4F7 2643 aa7.13□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Igkv4-59A0A0B4J1I8 117 aa7.13□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Trbv30A0A0B4J1P1 111 aa7.13□□□□□ -1.27
Col6a1-201ENSMUST00000001147 C1qcQ02105 246 aa7.13□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Lyzl4Q9D925 145 aa7.13□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Tmem263Q9DAM7 115 aa7.13□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Ighv1-52A0A0A6YXC3 117 aa7.12□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Tcte2E9PY37 120 aa7.12□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Gm17455G3UW87 128 aa7.12□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Klk1b4P00757 256 aa7.12□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Mpv17l2Q8VIK2 200 aa7.12□□□□□ -1.27
Col6a1-201ENSMUST00000001147 1810032O08RikE9PZV8 113 aa7.12□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Gm815Q3UWS2 115 aa7.12□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Trav9n-2A0A0G2JDP3 113 aa7.12□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Rnf183Q8QZS5 190 aa7.12□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Q8R092 253 aa7.12□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Ighv8-12A0A0G2JDE1 119 aa7.11□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Gm7257D3YX25 99 aa7.11□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Sprr3O09116 238 aa7.11□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Mrpl35Q9CQL6 188 aa7.11□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Fam216aQ9DB54 251 aa7.11□□□□□ -1.27
Col6a1-201ENSMUST00000001147 LhbO09108 141 aa7.11□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Rpl35aO55142 110 aa7.11□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Znf740Q6NZQ6 180 aa7.11□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Trav13d-1A0A075B606 110 aa7.1□□□□□ -1.27
Col6a1-201ENSMUST00000001147 A530064D06RikQ8BNV8 229 aa7.1□□□□□ -1.27
Col6a1-201ENSMUST00000001147 CicQ924A2 2510 aa7.1□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Gm7075D3Z497 112 aa7.1□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Gm10295Q8CCF3 114 aa7.1□□□□□ -1.27
Col6a1-201ENSMUST00000001147 4930415O20RikQ8CDT5 131 aa7.1□□□□□ -1.27
Col6a1-201ENSMUST00000001147 SpenQ62504 3644 aaKnown RBP7.1□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Crip3Q6Q6R3 243 aa7.1□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Smim10l1A0A087WNQ7 89 aa7.09□□□□□ -1.27
Col6a1-201ENSMUST00000001147 P01786 117 aa7.09□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Q9DAQ5 155 aa7.09□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Cep192E9Q4Y4 2514 aaKnown RBP7.09□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Gm5089A1L3C8 106 aa7.09□□□□□ -1.27
Col6a1-201ENSMUST00000001147 P01738 130 aa7.09□□□□□ -1.27
Col6a1-201ENSMUST00000001147 Gatd1Q8BFQ8 220 aa7.09□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms