RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Tm2d2Q8R0I4 213 aa11.39□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Sec16aA2AIX1 2377 aa11.39□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Egr2P08152 470 aa11.38□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Ube2bP63147 152 aa11.38□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 MylkQ6PDN3 1941 aaKnown RBP11.38□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Rai1Q61818 1889 aa11.38□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Igkv4-58A0A0G2JGI6 119 aa11.38□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 BlcapP62951 87 aa11.38□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Gm21060J3KMU4 56 aa11.38□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Zfand3Q497H0 227 aa11.38□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Gm5468Q8C3D3 155 aa11.38□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Odf3Q920N1 254 aa11.38□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Pla2g2aP31482 146 aa11.38□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 4930546C10RikE9Q4Y3 121 aa11.37□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Gm14137Q8CE97 175 aa11.37□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 MgamB5THE2 1827 aa11.37□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Col6a4A2AX52 2309 aa11.37□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 P01745 121 aa11.36□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Fam19a4Q7TPG5 135 aa11.36□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Znf672Q99LH4 468 aa11.36□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Greb1Q3UHK3 1954 aa11.36□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Prop1P97458 223 aa11.35□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Tmem243B2RVB9 118 aa11.35□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Iglc1A0A0G2JE99 106 aa11.35□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 P01843 105 aa11.35□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Crip1P63254 77 aa11.35□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 PrcdQ00LT2 53 aa11.35□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Odf3l1Q810P2 275 aa11.35□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 1700010B08RikQ9DAI7 102 aa11.35□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Ighv2-7A0A075B5Q8 116 aa11.34□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Map6d1Q14BB9 191 aa11.34□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Rbmy1bQ60990 380 aa11.34□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Gm12353A2AGJ4 60 aa11.34□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Eif4ebp1Q60876 117 aa11.34□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Wfdc15bQ9JHY4 80 aa11.34□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Ighv12-3A0A075B5T1 117 aa11.33□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Defb47Q30KN1 79 aa11.33□□□□□ -0.59
Pcdh20-201ENSMUST00000061628 Igkv4-74A0A0B4J1I3 119 aa11.33□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Gm5878E9PUB3 99 aa11.33□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Ppp1r32Q148A4 427 aa11.33□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Med12A2AGH6 2190 aa11.33□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 C920008G01RikA0A0B4J1N1 112 aa11.33□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Cox7a1P56392 80 aa11.33□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Ighv2-6A0A075B6A7 116 aa11.33□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Cox7b2Q9D2H1 82 aa11.33□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Ociad2Q9D8W7 154 aa11.33□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Ighv1-11A0A0A6YWI9 117 aa11.32□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Igkv8-26A0A075B5N5 123 aa11.32□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Rbm3O89086 153 aaKnown RBP11.32□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 NpyP57774 97 aa11.32□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Gm9958Q8C9U4 106 aa11.32□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Ndufa4l2Q4FZG9 87 aa11.32□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Ang3P97802 145 aa11.31□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Oxld1Q9CR10 201 aa11.31□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Anapc1P53995 1944 aaKnown RBP11.31□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Fxyd5P97808 178 aa11.31□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 CrygcQ61597 174 aa11.31□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Gm9949Q8C9F4 104 aa11.31□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Pde6gP09174 87 aa11.3□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Rpl39P62892 51 aa11.3□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 P0C913 63 aa11.3□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Crybg1A0A0G2JG52 2065 aa11.3□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 1810032O08RikE9PZV8 113 aa11.3□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Gm10518F6UQQ9 182 aa11.3□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 OdaphJ3QNT8 126 aa11.3□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 P01674 108 aa11.3□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 CadB2RQC6 2225 aa11.3□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Igkv1-122A0A140T8M9 119 aa11.3□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Atp5eP56382 52 aa11.3□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Mrpl35Q9CQL6 188 aa11.3□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Prp2P05143 317 aa11.29□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Cfap126Q6P8X9 189 aa11.29□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Pip4p1Q3TWL2 284 aa11.29□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 B9d2Q3UK10 175 aa11.29□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Trav11A0A0B4J1J9 114 aa11.29□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Gphb5Q812B2 130 aa11.29□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Q9CX25 107 aa11.29□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 FancmQ8BGE5 2021 aa11.29□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Trbv13-1A0A0B4J1P8 112 aa11.28□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Camk2n2Q78WH7 79 aa11.28□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Ighv1-75A0A075B5Y2 117 aa11.28□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 AW146154Q3TPQ7 468 aa11.28□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 AngP21570 145 aa11.28□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Dopey2Q3UHQ6 2295 aa11.27□□□□□ -0.6
Pcdh20-201ENSMUST00000061628 Iglv1A0A075B663 117 aa11.27□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Rnase1P00683 149 aa11.27□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Foxc1Q61572 553 aa11.26□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Snai3Q9QY31 287 aa11.26□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Gm9913Q8BQQ2 135 aa11.26□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Igkv8-18A0A0B4J1J3 123 aa11.26□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 PkdrejQ9Z0T6 2126 aa11.26□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 TncQ80YX1 2110 aa11.25□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Col5a3Q9JLI2 1739 aa11.25□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Gm26602M0QWA4 95 aa11.25□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Gata1P17679 413 aa11.25□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Ucn2Q99ML8 113 aa11.25□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Trip12G5E870 2025 aaKnown RBP11.25□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 P01658 132 aa11.24□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 P01729 129 aa11.24□□□□□ -0.61
Pcdh20-201ENSMUST00000061628 Gm10251J3QPM5 127 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 71.2 ms