RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 AamdcQ8R0P4 122 aa12.28□□□□□ -0.44
Trim28-201ENSMUST00000005705 Prss29Q99MS4 279 aa12.28□□□□□ -0.44
Trim28-201ENSMUST00000005705 Igkv4-57-1A0A075B5M4 119 aa12.28□□□□□ -0.44
Trim28-201ENSMUST00000005705 Tcrg-C1A0A075B5Z0 172 aa12.28□□□□□ -0.44
Trim28-201ENSMUST00000005705 Sumo2P61957 95 aaKnown RBP12.28□□□□□ -0.44
Trim28-201ENSMUST00000005705 Tex26Q0VB26 296 aa12.28□□□□□ -0.44
Trim28-201ENSMUST00000005705 Zfp248Q640N4 576 aa12.28□□□□□ -0.44
Trim28-201ENSMUST00000005705 Ss18l2Q9D174 77 aa12.28□□□□□ -0.44
Trim28-201ENSMUST00000005705 Akap13E9Q394 2776 aa12.27□□□□□ -0.44
Trim28-201ENSMUST00000005705 FlnaQ8BTM8 2647 aaKnown RBP12.27□□□□□ -0.44
Trim28-201ENSMUST00000005705 4930447F04RikA2AFR2 126 aa12.27□□□□□ -0.44
Trim28-201ENSMUST00000005705 Esp24A8R0V6 68 aa12.27□□□□□ -0.44
Trim28-201ENSMUST00000005705 Lmo4P61969 165 aa12.27□□□□□ -0.44
Trim28-201ENSMUST00000005705 Ighv14-1A0A075B5R4 117 aa12.27□□□□□ -0.45
Trim28-201ENSMUST00000005705 1700056E22RikF7CNM6 234 aa12.27□□□□□ -0.45
Trim28-201ENSMUST00000005705 Rpl39P62892 51 aa12.27□□□□□ -0.45
Trim28-201ENSMUST00000005705 Gm15557A6PWY0 234 aa12.26□□□□□ -0.45
Trim28-201ENSMUST00000005705 Tcrg-C3L7N479 172 aa12.26□□□□□ -0.45
Trim28-201ENSMUST00000005705 P03985 172 aa12.26□□□□□ -0.45
Trim28-201ENSMUST00000005705 Pla2g2cP48076 150 aa12.26□□□□□ -0.45
Trim28-201ENSMUST00000005705 Ighv1-4A0A075B5T4 117 aa12.26□□□□□ -0.45
Trim28-201ENSMUST00000005705 Gm5294J3QP53 216 aa12.26□□□□□ -0.45
Trim28-201ENSMUST00000005705 PkigO70139 76 aa12.26□□□□□ -0.45
Trim28-201ENSMUST00000005705 Smim1P0C8K7 78 aa12.26□□□□□ -0.45
Trim28-201ENSMUST00000005705 March3Q8BRX9 218 aa12.26□□□□□ -0.45
Trim28-201ENSMUST00000005705 Ighv5-8A0A075B676 92 aa12.26□□□□□ -0.45
Trim28-201ENSMUST00000005705 Ccl25O35903 144 aa12.26□□□□□ -0.45
Trim28-201ENSMUST00000005705 Vamp8O70404 101 aa12.26□□□□□ -0.45
Trim28-201ENSMUST00000005705 Ighv1-9A0A0A6YW37 117 aa12.25□□□□□ -0.45
Trim28-201ENSMUST00000005705 Zc2hc1bQ9D534 172 aa12.25□□□□□ -0.45
Trim28-201ENSMUST00000005705 Ccl19O70460 108 aa12.25□□□□□ -0.45
Trim28-201ENSMUST00000005705 Ube2e1P52482 193 aa12.25□□□□□ -0.45
Trim28-201ENSMUST00000005705 Gm1553Q66VB7 94 aa12.25□□□□□ -0.45
Trim28-201ENSMUST00000005705 Xlr5cQ9JJR2 179 aa12.25□□□□□ -0.45
Trim28-201ENSMUST00000005705 Gm9961Q8BNV2 113 aa12.24□□□□□ -0.45
Trim28-201ENSMUST00000005705 Gpr82Q8BZR0 328 aa12.24□□□□□ -0.45
Trim28-201ENSMUST00000005705 Usp24B1AY13 2617 aaKnown RBP12.24□□□□□ -0.45
Trim28-201ENSMUST00000005705 Cep192E9Q4Y4 2514 aaKnown RBP12.24□□□□□ -0.45
Trim28-201ENSMUST00000005705 Gm867A0A1W2P7T4 151 aa12.24□□□□□ -0.45
Trim28-201ENSMUST00000005705 Ndufa4Q62425 82 aaKnown RBP12.24□□□□□ -0.45
Trim28-201ENSMUST00000005705 Cysltr1Q99JA4 352 aa12.24□□□□□ -0.45
Trim28-201ENSMUST00000005705 Q9CX25 107 aa12.24□□□□□ -0.45
Trim28-201ENSMUST00000005705 Obox8V9GWY9 217 aa12.24□□□□□ -0.45
Trim28-201ENSMUST00000005705 C2cd3Q52KB6 2323 aa12.23□□□□□ -0.45
Trim28-201ENSMUST00000005705 Shisa9Q9CZN4 424 aa12.23□□□□□ -0.45
Trim28-201ENSMUST00000005705 Smlr1J3QMJ4 66 aa12.23□□□□□ -0.45
Trim28-201ENSMUST00000005705 Igkv4-59A0A0B4J1I8 117 aa12.22□□□□□ -0.45
Trim28-201ENSMUST00000005705 Gm6812B1AXU1 112 aa12.22□□□□□ -0.45
Trim28-201ENSMUST00000005705 1700020N15RikL7MTX3 112 aa12.22□□□□□ -0.45
Trim28-201ENSMUST00000005705 Defa2P28309 93 aa12.22□□□□□ -0.45
Trim28-201ENSMUST00000005705 Mllt11P97783 90 aa12.22□□□□□ -0.45
Trim28-201ENSMUST00000005705 AW146154Q3TPQ7 468 aa12.22□□□□□ -0.45
Trim28-201ENSMUST00000005705 SrarpQ3ULG3 163 aa12.22□□□□□ -0.45
Trim28-201ENSMUST00000005705 Olfr313Q5NC55 308 aa12.22□□□□□ -0.45
Trim28-201ENSMUST00000005705 Cdip1Q9DB75 208 aa12.22□□□□□ -0.45
Trim28-201ENSMUST00000005705 Pla2g2dQ9WVF6 144 aa12.22□□□□□ -0.45
Trim28-201ENSMUST00000005705 Gm35549A0A0N4SUS7 141 aa12.22□□□□□ -0.45
Trim28-201ENSMUST00000005705 P01837 106 aa12.22□□□□□ -0.45
Trim28-201ENSMUST00000005705 Olfr311Q5NC59 308 aa12.22□□□□□ -0.45
Trim28-201ENSMUST00000005705 Rpl13aP19253 203 aaKnown RBP12.21□□□□□ -0.45
Trim28-201ENSMUST00000005705 Q5BN45 167 aa12.21□□□□□ -0.45
Trim28-201ENSMUST00000005705 Ormdl2Q9CQZ0 153 aa12.21□□□□□ -0.45
Trim28-201ENSMUST00000005705 Gm11444F6QMA6 170 aa12.21□□□□□ -0.46
Trim28-201ENSMUST00000005705 P01643 108 aa12.21□□□□□ -0.46
Trim28-201ENSMUST00000005705 Foxi2Q3I5G5 311 aa12.21□□□□□ -0.46
Trim28-201ENSMUST00000005705 CnfnQ6PCW6 111 aa12.21□□□□□ -0.46
Trim28-201ENSMUST00000005705 Helz2E9QAM5 2947 aaKnown RBP12.21□□□□□ -0.46
Trim28-201ENSMUST00000005705 FshbQ60687 130 aa12.2□□□□□ -0.46
Trim28-201ENSMUST00000005705 Samd10Q7TST3 202 aa12.2□□□□□ -0.46
Trim28-201ENSMUST00000005705 BC106179Q8C9L1 186 aa12.2□□□□□ -0.46
Trim28-201ENSMUST00000005705 Igkv4-74A0A0B4J1I3 119 aa12.2□□□□□ -0.46
Trim28-201ENSMUST00000005705 OdaphJ3QNT8 126 aa12.2□□□□□ -0.46
Trim28-201ENSMUST00000005705 P01811 117 aa12.2□□□□□ -0.46
Trim28-201ENSMUST00000005705 A130051J06RikQ8CAU1 227 aa12.2□□□□□ -0.46
Trim28-201ENSMUST00000005705 RhohQ9D3G9 191 aa12.2□□□□□ -0.46
Trim28-201ENSMUST00000005705 Gm28539A0A087WSL9 92 aa12.19□□□□□ -0.46
Trim28-201ENSMUST00000005705 Igkv4-71A0A0G2JEH0 117 aa12.19□□□□□ -0.46
Trim28-201ENSMUST00000005705 Hoxd3P09027 433 aa12.19□□□□□ -0.46
Trim28-201ENSMUST00000005705 Fam222aQ6PGH4 453 aa12.19□□□□□ -0.46
Trim28-201ENSMUST00000005705 Tspan13Q9D8C2 204 aa12.19□□□□□ -0.46
Trim28-201ENSMUST00000005705 Triap1Q9D8Z2 76 aa12.19□□□□□ -0.46
Trim28-201ENSMUST00000005705 Prp2P05143 317 aa12.19□□□□□ -0.46
Trim28-201ENSMUST00000005705 Klhdc1Q80YG3 406 aa12.19□□□□□ -0.46
Trim28-201ENSMUST00000005705 Ighv3-4A0A0A6YXF1 117 aa12.18□□□□□ -0.46
Trim28-201ENSMUST00000005705 Scgb1b2O35176 93 aa12.18□□□□□ -0.46
Trim28-201ENSMUST00000005705 P01739 132 aa12.18□□□□□ -0.46
Trim28-201ENSMUST00000005705 CckP09240 115 aa12.18□□□□□ -0.46
Trim28-201ENSMUST00000005705 MdfiP70331 251 aa12.18□□□□□ -0.46
Trim28-201ENSMUST00000005705 Trav6-4A0A075B6B4 115 aa12.18□□□□□ -0.46
Trim28-201ENSMUST00000005705 P01802 115 aa12.18□□□□□ -0.46
Trim28-201ENSMUST00000005705 Dpm3Q9D1Q4 92 aa12.18□□□□□ -0.46
Trim28-201ENSMUST00000005705 Ighv1-53A0A075B5W3 117 aa12.18□□□□□ -0.46
Trim28-201ENSMUST00000005705 P01820 115 aa12.17□□□□□ -0.46
Trim28-201ENSMUST00000005705 Gm5629P06327 117 aa12.17□□□□□ -0.46
Trim28-201ENSMUST00000005705 Egr2P08152 470 aa12.17□□□□□ -0.46
Trim28-201ENSMUST00000005705 C1qcQ02105 246 aa12.17□□□□□ -0.46
Trim28-201ENSMUST00000005705 Gm17334Q8C6U3 126 aa12.17□□□□□ -0.46
Trim28-201ENSMUST00000005705 Tmem14cQ9CQN6 114 aa12.17□□□□□ -0.46
Trim28-201ENSMUST00000005705 PmvkQ9D1G2 192 aa12.17□□□□□ -0.46
Trim28-201ENSMUST00000005705 Ccl24Q9JKC0 119 aa12.17□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms