RNA–Protein interactions for RNA: ENSMUST00000122063.7

Ift88-201, Transcript of Intraflagellar transport protein 88 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift88, Length 3,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88-201ENSMUST00000122063 Gm10604Q3V0X7 143 aa8.26□□□□□ -1.09
Ift88-201ENSMUST00000122063 Gm10775Q3V290 127 aa8.26□□□□□ -1.09
Ift88-201ENSMUST00000122063 Spag11Q8K4N2 71 aa8.26□□□□□ -1.09
Ift88-201ENSMUST00000122063 Olfr1367Q8VFG2 316 aa8.26□□□□□ -1.09
Ift88-201ENSMUST00000122063 Snai3Q9QY31 287 aa8.26□□□□□ -1.09
Ift88-201ENSMUST00000122063 Trbv14A0A140T8L9 115 aa8.25□□□□□ -1.09
Ift88-201ENSMUST00000122063 P01812 117 aa8.25□□□□□ -1.09
Ift88-201ENSMUST00000122063 Snrpd3P62320 126 aaKnown RBP8.25□□□□□ -1.09
Ift88-201ENSMUST00000122063 Srsf1Q6PDM2 248 aaKnown RBP8.25□□□□□ -1.09
Ift88-201ENSMUST00000122063 Ccl24Q9JKC0 119 aa8.25□□□□□ -1.09
Ift88-201ENSMUST00000122063 Igfn1Q3KNY0 2849 aa8.25□□□□□ -1.09
Ift88-201ENSMUST00000122063 BC107364E9Q5A2 140 aa8.25□□□□□ -1.09
Ift88-201ENSMUST00000122063 P06328 117 aa8.25□□□□□ -1.09
Ift88-201ENSMUST00000122063 P06334 169 aa8.25□□□□□ -1.09
Ift88-201ENSMUST00000122063 Psmg4P0C7N9 123 aa8.25□□□□□ -1.09
Ift88-201ENSMUST00000122063 Gpx1P11352 201 aa8.25□□□□□ -1.09
Ift88-201ENSMUST00000122063 Sumo2P61957 95 aaKnown RBP8.25□□□□□ -1.09
Ift88-201ENSMUST00000122063 Cited1P97769 203 aa8.25□□□□□ -1.09
Ift88-201ENSMUST00000122063 Cd33Q63994 403 aa8.25□□□□□ -1.09
Ift88-201ENSMUST00000122063 Cotl1Q9CQI6 142 aa8.25□□□□□ -1.09
Ift88-201ENSMUST00000122063 Tmem14cQ9CQN6 114 aa8.25□□□□□ -1.09
Ift88-201ENSMUST00000122063 Gnb1lQ9EQ15 326 aa8.25□□□□□ -1.09
Ift88-201ENSMUST00000122063 Ighv2-7A0A075B5Q8 116 aa8.24□□□□□ -1.09
Ift88-201ENSMUST00000122063 NpsP0C0P8 89 aa8.24□□□□□ -1.09
Ift88-201ENSMUST00000122063 Sdhaf1Q3U276 118 aa8.24□□□□□ -1.09
Ift88-201ENSMUST00000122063 Fam222aQ6PGH4 453 aa8.24□□□□□ -1.09
Ift88-201ENSMUST00000122063 Psmb11Q8BG41 302 aa8.24□□□□□ -1.09
Ift88-201ENSMUST00000122063 Arid1bE9Q4N7 2244 aa8.24□□□□□ -1.09
Ift88-201ENSMUST00000122063 Epg5Q80TA9 2572 aa8.24□□□□□ -1.09
Ift88-201ENSMUST00000122063 Ighv1-16A0A075B5U1 98 aa8.24□□□□□ -1.09
Ift88-201ENSMUST00000122063 Ighv1-52A0A0A6YXC3 117 aa8.24□□□□□ -1.09
Ift88-201ENSMUST00000122063 Tmem238lA0A1B0GS74 79 aa8.24□□□□□ -1.09
Ift88-201ENSMUST00000122063 Gm16442D3YZG3 307 aa8.24□□□□□ -1.09
Ift88-201ENSMUST00000122063 Esp3J3QN49 87 aa8.24□□□□□ -1.09
Ift88-201ENSMUST00000122063 H2-DMb1P35737 261 aa8.23□□□□□ -1.09
Ift88-201ENSMUST00000122063 BtcQ05928 177 aa8.23□□□□□ -1.09
Ift88-201ENSMUST00000122063 Wfdc15aQ8BH89 80 aa8.23□□□□□ -1.09
Ift88-201ENSMUST00000122063 Col7a1Q63870 2944 aa8.23□□□□□ -1.09
Ift88-201ENSMUST00000122063 Usp9yF8VPU6 2556 aa8.23□□□□□ -1.09
Ift88-201ENSMUST00000122063 Igkv4-69A0A0B4J1I6 116 aa8.23□□□□□ -1.09
Ift88-201ENSMUST00000122063 Ndufa4Q62425 82 aaKnown RBP8.23□□□□□ -1.09
Ift88-201ENSMUST00000122063 MturnQ8CGA4 131 aa8.23□□□□□ -1.09
Ift88-201ENSMUST00000122063 Klk7Q91VE3 249 aa8.23□□□□□ -1.09
Ift88-201ENSMUST00000122063 Gm45521A0A1B0GRK0 198 aa8.23□□□□□ -1.09
Ift88-201ENSMUST00000122063 Smim13E9Q942 88 aa8.23□□□□□ -1.09
Ift88-201ENSMUST00000122063 Ndufb4Q9CQC7 129 aa8.23□□□□□ -1.09
Ift88-201ENSMUST00000122063 8030423J24RikQ9CX45 142 aa8.23□□□□□ -1.09
Ift88-201ENSMUST00000122063 Zfp462B1AWL2 2495 aaKnown RBP8.23□□□□□ -1.09
Ift88-201ENSMUST00000122063 Q9D727 114 aa8.22□□□□□ -1.09
Ift88-201ENSMUST00000122063 Mast4Q811L6 2618 aa8.22□□□□□ -1.09
Ift88-201ENSMUST00000122063 Bsph2Q0Q236 131 aa8.22□□□□□ -1.09
Ift88-201ENSMUST00000122063 Cks1brtQ3UNC9 96 aa8.22□□□□□ -1.09
Ift88-201ENSMUST00000122063 Ndufc2Q9CQ54 120 aa8.22□□□□□ -1.09
Ift88-201ENSMUST00000122063 Ube2v1Q9CZY3 147 aa8.22□□□□□ -1.09
Ift88-201ENSMUST00000122063 Gm5089A1L3C8 106 aa8.21□□□□□ -1.09
Ift88-201ENSMUST00000122063 Gm11565A2A4M7 156 aa8.21□□□□□ -1.09
Ift88-201ENSMUST00000122063 PmvkQ9D1G2 192 aa8.21□□□□□ -1.09
Ift88-201ENSMUST00000122063 Notch3Q61982 2318 aa8.21□□□□□ -1.1
Ift88-201ENSMUST00000122063 CubnQ9JLB4 3623 aa8.21□□□□□ -1.1
Ift88-201ENSMUST00000122063 Tmem170bP86050 132 aa8.21□□□□□ -1.1
Ift88-201ENSMUST00000122063 Clec4b2Q67DU8 208 aa8.21□□□□□ -1.1
Ift88-201ENSMUST00000122063 Ighv1-75A0A075B5Y2 117 aa8.21□□□□□ -1.1
Ift88-201ENSMUST00000122063 Ighv2-3A0A075B696 115 aa8.21□□□□□ -1.1
Ift88-201ENSMUST00000122063 Ighv3-3A0A0A6YWL2 116 aa8.21□□□□□ -1.1
Ift88-201ENSMUST00000122063 C1qcQ02105 246 aa8.21□□□□□ -1.1
Ift88-201ENSMUST00000122063 Gng7Q61016 68 aa8.21□□□□□ -1.1
Ift88-201ENSMUST00000122063 Avpi1Q9D7H4 142 aa8.21□□□□□ -1.1
Ift88-201ENSMUST00000122063 Josd1Q9DBJ6 202 aa8.21□□□□□ -1.1
Ift88-201ENSMUST00000122063 Trav8-1A0A075B641 109 aa8.2□□□□□ -1.1
Ift88-201ENSMUST00000122063 Brd3osA0A1B0GRB6 84 aa8.2□□□□□ -1.1
Ift88-201ENSMUST00000122063 Umad1E0CX23 159 aa8.2□□□□□ -1.1
Ift88-201ENSMUST00000122063 Srp14P16254 110 aaKnown RBP8.2□□□□□ -1.1
Ift88-201ENSMUST00000122063 Tspo2Q9CRZ8 162 aa8.2□□□□□ -1.1
Ift88-201ENSMUST00000122063 Setd2E9Q5F9 2537 aa8.2□□□□□ -1.1
Ift88-201ENSMUST00000122063 Gm29289A0A087WPY7 166 aa8.2□□□□□ -1.1
Ift88-201ENSMUST00000122063 Gm4064A0A087WR82 380 aa8.2□□□□□ -1.1
Ift88-201ENSMUST00000122063 Gm10352B2RWR6 380 aa8.2□□□□□ -1.1
Ift88-201ENSMUST00000122063 1810032O08RikE9PZV8 113 aa8.2□□□□□ -1.1
Ift88-201ENSMUST00000122063 Gm21693J3QK27 380 aa8.2□□□□□ -1.1
Ift88-201ENSMUST00000122063 Gm28044L7N1X0 119 aa8.2□□□□□ -1.1
Ift88-201ENSMUST00000122063 Rbmy1a1O35698 380 aa8.2□□□□□ -1.1
Ift88-201ENSMUST00000122063 Ormdl2Q9CQZ0 153 aa8.2□□□□□ -1.1
Ift88-201ENSMUST00000122063 Gm17430F6RSK3 157 aa8.19□□□□□ -1.1
Ift88-201ENSMUST00000122063 Defa13P50711 93 aa8.19□□□□□ -1.1
Ift88-201ENSMUST00000122063 Cphx2Q8BX39 182 aa8.19□□□□□ -1.1
Ift88-201ENSMUST00000122063 Vps25Q9CQ80 176 aa8.19□□□□□ -1.1
Ift88-201ENSMUST00000122063 Tm4sf20Q9CQY8 226 aa8.19□□□□□ -1.1
Ift88-201ENSMUST00000122063 Erg28Q9ERY9 140 aa8.19□□□□□ -1.1
Ift88-201ENSMUST00000122063 Defa34D3Z0J0 93 aa8.19□□□□□ -1.1
Ift88-201ENSMUST00000122063 P18527 97 aa8.19□□□□□ -1.1
Ift88-201ENSMUST00000122063 Mllt11P97783 90 aa8.19□□□□□ -1.1
Ift88-201ENSMUST00000122063 Snx22Q8C084 192 aa8.19□□□□□ -1.1
Ift88-201ENSMUST00000122063 Odf3Q920N1 254 aa8.19□□□□□ -1.1
Ift88-201ENSMUST00000122063 Mapk1ip1lQ8BH93 242 aa8.18□□□□□ -1.1
Ift88-201ENSMUST00000122063 Vmn1r197Q8R265 298 aa8.18□□□□□ -1.1
Ift88-201ENSMUST00000122063 Iah1Q9DB29 249 aa8.18□□□□□ -1.1
Ift88-201ENSMUST00000122063 Ly86O88188 162 aa8.18□□□□□ -1.1
Ift88-201ENSMUST00000122063 Bri3P28662 125 aa8.18□□□□□ -1.1
Ift88-201ENSMUST00000122063 Rpl39P62892 51 aa8.18□□□□□ -1.1
Ift88-201ENSMUST00000122063 Tenm3Q9WTS6 2715 aa8.18□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms