RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Ighv1-64A0A075B5X3 117 aa8.23□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Ighv1-52A0A0A6YXC3 117 aa8.23□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Pou2af1Q64693 256 aa8.23□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Gm5941Q497P9 117 aa8.23□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Gm10295Q8CCF3 114 aa8.23□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Tnfrsf13bQ9ET35 249 aa8.23□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Trav12d-3A0A075B6A4 115 aa8.23□□□□□ -1.09
Scn8a-201ENSMUST00000082209 CtsgP28293 261 aa8.23□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Defb3Q9WTL0 63 aa8.23□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Wfdc2Q9DAU7 174 aa8.23□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Dscaml1Q4VA61 2053 aa8.23□□□□□ -1.09
Scn8a-201ENSMUST00000082209 B230307C23RikQ8BLB2 64 aa8.23□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Trbv16A0A0B4J1H3 115 aa8.22□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Gm5129F6YHA9 99 aa8.22□□□□□ -1.09
Scn8a-201ENSMUST00000082209 E030018B13RikJ3QMS9 113 aa8.22□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Bex1Q9R224 128 aa8.22□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Igkv8-16A0A0G2JDG9 121 aa8.22□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Zc2hc1aQ8BJH1 324 aa8.22□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Ighv3-8A0A075B5T0 131 aa8.22□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Lect2O88803 151 aa8.22□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Ndufa3Q9CQ91 84 aa8.22□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Reg3gO09049 174 aa8.22□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Ang5Q5GAN1 145 aa8.22□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Gvin1Q80SU7 2427 aa8.22□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Ighv3-1A0A075B5S6 116 aa8.21□□□□□ -1.09
Scn8a-201ENSMUST00000082209 LitafQ9JLJ0 161 aa8.21□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Obox8V9GWY9 217 aa8.21□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Ighv1-77A0A0G2JGS9 117 aa8.21□□□□□ -1.09
Scn8a-201ENSMUST00000082209 Leap2Q91V13 76 aa8.21□□□□□ -1.1
Scn8a-201ENSMUST00000082209 1500011B03RikQ3TTH7 73 aa8.21□□□□□ -1.1
Scn8a-201ENSMUST00000082209 3110021N24RikJ3QMN2 152 aa8.21□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Ube2e2Q91W82 201 aa8.21□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Ndufa12Q7TMF3 145 aaKnown RBP8.21□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Tmem52Q9D702 196 aa8.21□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Gatd1Q8BFQ8 220 aa8.2□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Gm26558Q8BLW8 286 aa8.2□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Igkv4-81A0A0G2JEY5 119 aa8.2□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Gm15080A2BI02 449 aa8.2□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Mlst8Q9DCJ1 326 aa8.2□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Igkv4-72A0A0B4J1I4 117 aa8.2□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Glrp1E9Q9S8 174 aa8.2□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Ccl21aP84444 133 aa8.2□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Ccl21bP86792 133 aa8.2□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Ccl21cP86793 133 aa8.2□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Wfdc11A2A5H7 82 aa8.2□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Cela2aP05208 271 aa8.2□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Igkv4-61A0A0G2JH00 117 aa8.2□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Fxyd5P97808 178 aa8.2□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Pfn2Q9JJV2 140 aa8.2□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Gm4861Q8C5A4 106 aa8.2□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Gm5468Q8C3D3 155 aa8.19□□□□□ -1.1
Scn8a-201ENSMUST00000082209 P01789 122 aa8.19□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Dido1Q8C9B9 2256 aaKnown RBP8.19□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Prok2Q9QXU7 128 aa8.19□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Lst1O08843 95 aa8.19□□□□□ -1.1
Scn8a-201ENSMUST00000082209 P01792 123 aa8.19□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Ang4Q3TMQ6 144 aa8.18□□□□□ -1.1
Scn8a-201ENSMUST00000082209 E130218I03RikA0A0U1RNU5 63 aa8.18□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Clec4b2Q67DU8 208 aa8.18□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Lyg1Q9D7Q0 197 aa8.18□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Nxph4G3X9N5 304 aa8.18□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Tmem263Q9DAM7 115 aa8.18□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Bub3Q9WVA3 326 aa8.18□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Igkv4-54A0A0G2JES9 117 aa8.18□□□□□ -1.1
Scn8a-201ENSMUST00000082209 7420426K07RikQ3UX66 186 aa8.18□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Chchd5Q9CQP3 110 aa8.18□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Ccl24Q9JKC0 119 aa8.18□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Rnf144bQ8BKD6 301 aa8.17□□□□□ -1.1
Scn8a-201ENSMUST00000082209 BC048562Q80ZQ7 204 aa8.17□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Ncor1Q60974 2453 aa8.17□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Igkv4-59A0A0B4J1I8 117 aa8.17□□□□□ -1.1
Scn8a-201ENSMUST00000082209 SelenowP63300 88 aa8.17□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Sox16Q62247 57 aa8.17□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Znrd1Q791N7 123 aa8.17□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Fam24aQ8CF27 98 aa8.17□□□□□ -1.1
Scn8a-201ENSMUST00000082209 1700010B08RikQ9DAI7 102 aa8.17□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Sp5Q9JHX2 398 aa8.17□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Gm16503Q8C6M9 103 aa8.17□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Ighv2-6A0A075B6A7 116 aa8.17□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Trav9d-4A0A0G2JG37 103 aa8.17□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Tmem223Q9CQE2 199 aaKnown RBP8.16□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Gp9O88186 177 aa8.16□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Gm5878E9PUB3 99 aa8.16□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Cox7b2Q9D2H1 82 aa8.16□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Znf740Q6NZQ6 180 aa8.16□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Gm9961Q8BNV2 113 aa8.16□□□□□ -1.1
Scn8a-201ENSMUST00000082209 9930022D16RikQ8BG27 128 aa8.16□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Defa21Q8C1P2 93 aa8.16□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Zc2hc1bQ9D534 172 aa8.16□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Gm17455G3UW87 128 aa8.15□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Odf3Q920N1 254 aa8.15□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Zfp951A0A087WRH0 451 aa8.15□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Ly6gP35461 111 aa8.15□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Defb26Q30KN7 186 aa8.15□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Tmem243B2RVB9 118 aa8.15□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Msrb3Q8BU85 253 aa8.15□□□□□ -1.1
Scn8a-201ENSMUST00000082209 UrahQ9CRB3 118 aa8.15□□□□□ -1.1
Scn8a-201ENSMUST00000082209 MplkipQ9D011 178 aa8.15□□□□□ -1.1
Scn8a-201ENSMUST00000082209 Odf1Q61999 247 aa8.15□□□□□ -1.11
Scn8a-201ENSMUST00000082209 Ncor2Q9WU42 2472 aaKnown RBP8.15□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 152.9 ms