RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Svs5P30933 122 aa13.47□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Lgals4Q8K419 326 aa13.47□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Nat8b-psE0CYC6 232 aa13.47□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 P01724 129 aa13.47□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 P01727 129 aa13.47□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Tex26Q0VB26 296 aa13.47□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Dmrt3Q80WT2 476 aa13.47□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 SNORCQ9CXL7 121 aa13.47□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Smg1Q8BKX6 3658 aaKnown RBP13.46□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Ighv1-62-3P01754 117 aa13.46□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Lynx1P0DP60 116 aa13.46□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Atp5lQ9CPQ8 103 aa13.46□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Wfdc15bQ9JHY4 80 aa13.46□□□□□ -0.25
Sqstm1-201ENSMUST00000015981 Ighv1-80A0A075B5Y3 117 aa13.46□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Mrps12O35680 139 aa13.45□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Q9DAQ5 155 aa13.45□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Myo15bI7HPW8 3033 aa13.45□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Fam24aQ8CF27 98 aa13.45□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Q9CX25 107 aa13.44□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Xlr5cQ9JJR2 179 aa13.44□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Igkv4-57A0A0A6YYE7 117 aa13.44□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Klk7Q91VE3 249 aa13.44□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Crip2Q9DCT8 208 aaKnown RBP13.44□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Zfp248Q640N4 576 aa13.43□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 DspE9Q557 2883 aaKnown RBP13.43□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Gm867A0A1W2P7T4 151 aa13.43□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Gm2174F6ZVF2 133 aa13.43□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Gm933J3QPC1 141 aa13.43□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Gm28044L7N1X0 119 aa13.42□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Egr2P08152 470 aa13.42□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Ly6lH3BJG9 140 aa13.42□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Q5BN45 167 aa13.42□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Parm1Q923D3 296 aa13.42□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Morn5Q9DAI9 170 aa13.42□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Sdk1Q3UH53 2193 aa13.41□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 C920008G01RikA0A0B4J1N1 112 aa13.41□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Trbv13-1A0A0B4J1P8 112 aa13.41□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Gm10135F6TEE5 83 aa13.41□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Rpl39P62892 51 aa13.41□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Ang2Q64438 145 aa13.41□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Arl3Q9WUL7 182 aa13.41□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Phlda3Q9WV95 125 aa13.41□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Odf1Q61999 247 aa13.41□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Atp6v0e1Q9CQD8 81 aa13.41□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Lyrm7Q9DA03 104 aa13.41□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Cacna1hO88427 2365 aa13.41□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Trbv17A0A140T8P8 114 aa13.4□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Gm17727E9Q4V7 109 aa13.4□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 CrebbpP45481 2441 aa13.4□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Ighv3-1A0A075B5S6 116 aa13.4□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Gm11444F6QMA6 170 aa13.4□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Zfand3Q497H0 227 aa13.4□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Spata46Q4FZF2 204 aa13.4□□□□□ -0.26
Sqstm1-201ENSMUST00000015981 Igkv4-70A0A0B4J1I5 116 aa13.39□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Smim20D3Z7Q2 69 aa13.39□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Gm2564F6Z9S8 108 aa13.39□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Spink6Q8BT20 105 aa13.39□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 PmvkQ9D1G2 192 aa13.39□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Igkv20-101-2A0A0G2JDU3 113 aa13.39□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Hoxd3P09027 433 aa13.39□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Ifitm10Q8BR26 201 aa13.39□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Wipf1Q8K1I7 493 aa13.39□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Dopey1Q8BL99 2399 aa13.39□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 4930596D02RikQ3V0H9 216 aa13.38□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 BC025920Q3US60 128 aa13.38□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Gm10735Q3US96 136 aa13.38□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Ang5Q5GAN1 145 aa13.38□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Nbl1Q61477 178 aa13.38□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Ccl19O70460 108 aa13.37□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Rpl32-psP17932 135 aa13.37□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Defb47Q30KN1 79 aa13.37□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Ighv1-82A0A0G2JEU7 117 aa13.37□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Pla2g2dQ9WVF6 144 aa13.37□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 ApomQ9Z1R3 190 aa13.37□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Arhgap32Q811P8 2089 aa13.37□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Gm10251J3QPM5 127 aa13.36□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Mrps21P58059 87 aa13.36□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Trav7d-3Q5R1I1 112 aa13.36□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Ighv1-75A0A075B5Y2 117 aa13.36□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Igkv4-74A0A0B4J1I3 119 aa13.36□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Socs3O35718 225 aa13.36□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Psmb8P28063 276 aa13.36□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Polr2kQ63871 58 aa13.36□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 BC106179Q8C9L1 186 aa13.36□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Stpg1Q9D2F5 341 aa13.36□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Q9DAB9 146 aa13.36□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Gm35549A0A0N4SUS7 141 aa13.35□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Ighv1-74A0A0G2JGK2 117 aa13.35□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Rpl32P62911 135 aaKnown RBP13.35□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 BB014433Q8C5R5 389 aa13.35□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Dpm3Q9D1Q4 92 aa13.35□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 P01811 117 aa13.34□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Q4KKZ1 196 aa13.34□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Cyyr1Q8VIH7 165 aa13.34□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Ighv3-3A0A0A6YWL2 116 aa13.34□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 P01643 108 aa13.34□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 P01747 120 aa13.34□□□□□ -0.27
Sqstm1-201ENSMUST00000015981 Atp5eP56382 52 aa13.33□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Spint3Q3UW09 88 aa13.33□□□□□ -0.28
Sqstm1-201ENSMUST00000015981 Iah1Q9DB29 249 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms