RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C PEF1P53238 335 aa2.8□□□□□ -1.96
RPL40BYKR094C ECM16Q04217 1267 aaKnown RBP2.8□□□□□ -1.96
RPL40BYKR094C PLM2Q04383 521 aa2.8□□□□□ -1.96
RPL40BYKR094C LCB4Q12246 624 aa2.8□□□□□ -1.96
RPL40BYKR094C PPZ1P26570 692 aa2.79□□□□□ -1.96
RPL40BYKR094C PLC1P32383 869 aa2.79□□□□□ -1.96
RPL40BYKR094C TYS1P36421 394 aaKnown RBP2.79□□□□□ -1.96
RPL40BYKR094C VPS8P39702 1274 aa2.79□□□□□ -1.96
RPL40BYKR094C VRG4P40107 337 aa2.79□□□□□ -1.96
RPL40BYKR094C RAD26P40352 1085 aa2.79□□□□□ -1.96
RPL40BYKR094C SKP2P42843 763 aa2.79□□□□□ -1.96
RPL40BYKR094C MTQ2Q03920 221 aaPredicted RBP2.79□□□□□ -1.96
RPL40BYKR094C GSH2Q08220 491 aa2.79□□□□□ -1.96
RPL40BYKR094C CBP3P21560 335 aa2.78□□□□□ -1.96
RPL40BYKR094C YBR139WP38109 508 aa2.78□□□□□ -1.96
RPL40BYKR094C LAS21P40367 830 aa2.78□□□□□ -1.96
RPL40BYKR094C YNL144CP53907 740 aa2.78□□□□□ -1.96
RPL40BYKR094C BET4Q00618 327 aa2.78□□□□□ -1.96
RPL40BYKR094C ACS1Q01574 713 aa2.78□□□□□ -1.96
RPL40BYKR094C YML053CQ04978 212 aa2.78□□□□□ -1.96
RPL40BYKR094C NGL1Q08213 363 aaKnown RBP2.78□□□□□ -1.96
RPL40BYKR094C NOP14Q99207 810 aaKnown RBP2.78□□□□□ -1.96
RPL40BYKR094C AEP2P22136 580 aa2.77□□□□□ -1.97
RPL40BYKR094C YND1P40009 630 aa2.77□□□□□ -1.97
RPL40BYKR094C MAM1P40065 302 aa2.77□□□□□ -1.97
RPL40BYKR094C NOP2P40991 618 aaKnown RBP2.77□□□□□ -1.97
RPL40BYKR094C YJL107CP42947 387 aa2.77□□□□□ -1.97
RPL40BYKR094C OSW7P43611 510 aa2.77□□□□□ -1.97
RPL40BYKR094C MNN11P46985 422 aaKnown RBP2.77□□□□□ -1.97
RPL40BYKR094C ATP12P22135 325 aa2.76□□□□□ -1.97
RPL40BYKR094C STB5P38699 743 aa2.76□□□□□ -1.97
RPL40BYKR094C MDR1P53258 950 aa2.76□□□□□ -1.97
RPL40BYKR094C YTM1Q12024 460 aaPredicted RBP2.76□□□□□ -1.97
RPL40BYKR094C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
RPL40BYKR094C YER175W-AQ8TGU4 54 aa2.76□□□□□ -1.97
RPL40BYKR094C DID4P36108 232 aa2.75□□□□□ -1.97
RPL40BYKR094C RRP8P38961 392 aaKnown RBP2.75□□□□□ -1.97
RPL40BYKR094C DHH1P39517 506 aaKnown RBP2.75□□□□□ -1.97
RPL40BYKR094C UBP7P40453 1071 aa2.75□□□□□ -1.97
RPL40BYKR094C COS12P53053 380 aa2.75□□□□□ -1.97
RPL40BYKR094C YDL242WQ07746 117 aa2.75□□□□□ -1.97
RPL40BYKR094C THI73Q07904 523 aa2.75□□□□□ -1.97
RPL40BYKR094C SES1P07284 462 aaKnown RBP2.74□□□□□ -1.97
RPL40BYKR094C ARG1P22768 420 aa2.74□□□□□ -1.97
RPL40BYKR094C CWH43P25618 953 aa2.74□□□□□ -1.97
RPL40BYKR094C SER1P33330 395 aaKnown RBP2.74□□□□□ -1.97
RPL40BYKR094C ORC5P50874 479 aa2.74□□□□□ -1.97
RPL40BYKR094C FPR4Q06205 392 aaPredicted RBP2.74□□□□□ -1.97
RPL40BYKR094C VPS5Q92331 675 aa2.74□□□□□ -1.97
RPL40BYKR094C ADR1P07248 1323 aa2.73□□□□□ -1.97
RPL40BYKR094C GSH1P32477 678 aa2.73□□□□□ -1.97
RPL40BYKR094C NIC96P34077 839 aa2.73□□□□□ -1.97
RPL40BYKR094C ARO9P38840 513 aaPredicted RBP2.73□□□□□ -1.97
RPL40BYKR094C HLJ1P48353 224 aa2.73□□□□□ -1.97
RPL40BYKR094C RNR4P49723 345 aaKnown RBP2.73□□□□□ -1.97
RPL40BYKR094C YAT1P80235 687 aa2.73□□□□□ -1.97
RPL40BYKR094C TIP41Q12199 356 aa2.73□□□□□ -1.97
RPL40BYKR094C ARN1P38731 627 aa2.72□□□□□ -1.97
RPL40BYKR094C FMP42Q04991 504 aa2.72□□□□□ -1.97
RPL40BYKR094C RKM3P38222 552 aa2.71□□□□□ -1.98
RPL40BYKR094C LNP1P38878 278 aa2.71□□□□□ -1.98
RPL40BYKR094C QRI7P43122 407 aa2.71□□□□□ -1.98
RPL40BYKR094C IRC5P43610 853 aa2.71□□□□□ -1.98
RPL40BYKR094C MNT2P53059 558 aa2.71□□□□□ -1.98
RPL40BYKR094C DNM1P54861 757 aa2.71□□□□□ -1.98
RPL40BYKR094C URA3P03962 267 aa2.7□□□□□ -1.98
RPL40BYKR094C MNN2P38069 597 aa2.7□□□□□ -1.98
RPL40BYKR094C SRP68P38687 599 aaKnown RBP2.7□□□□□ -1.98
RPL40BYKR094C PCL6P40038 420 aa2.7□□□□□ -1.98
RPL40BYKR094C PEA2P40091 420 aa2.7□□□□□ -1.98
RPL40BYKR094C IZH1Q03419 316 aa2.7□□□□□ -1.98
RPL40BYKR094C YLR281CQ05863 155 aa2.7□□□□□ -1.98
RPL40BYKR094C GPN2Q08726 347 aaPredicted RBP2.7□□□□□ -1.98
RPL40BYKR094C YOR378WQ08902 515 aa2.7□□□□□ -1.98
RPL40BYKR094C DAL3P32459 195 aa2.69□□□□□ -1.98
RPL40BYKR094C BZZ1P38822 633 aa2.69□□□□□ -1.98
RPL40BYKR094C ALG12P53730 551 aa2.69□□□□□ -1.98
RPL40BYKR094C SMA2Q04658 369 aa2.69□□□□□ -1.98
RPL40BYKR094C YLR112WQ12130 139 aa2.69□□□□□ -1.98
RPL40BYKR094C ILV2P07342 687 aaKnown RBP2.68□□□□□ -1.98
RPL40BYKR094C CDC23P16522 626 aa2.68□□□□□ -1.98
RPL40BYKR094C KGD2P19262 463 aaPredicted RBP2.68□□□□□ -1.98
RPL40BYKR094C VBA2P38358 474 aaKnown RBP2.68□□□□□ -1.98
RPL40BYKR094C VPS25P47142 202 aa2.68□□□□□ -1.98
RPL40BYKR094C GPG1P53130 126 aa2.68□□□□□ -1.98
RPL40BYKR094C YGL036WP53185 909 aaPredicted RBP2.68□□□□□ -1.98
RPL40BYKR094C RNH70P53331 553 aa2.68□□□□□ -1.98
RPL40BYKR094C UME1Q03010 460 aa2.68□□□□□ -1.98
RPL40BYKR094C SND1Q04007 877 aa2.68□□□□□ -1.98
RPL40BYKR094C YLR352WQ06479 807 aa2.68□□□□□ -1.98
RPL40BYKR094C YPR027CQ12079 277 aa2.68□□□□□ -1.98
RPL40BYKR094C YCR061WP25639 631 aa2.67□□□□□ -1.98
RPL40BYKR094C MSS51P32335 436 aa2.67□□□□□ -1.98
RPL40BYKR094C RRP14P36080 434 aaKnown RBP2.67□□□□□ -1.98
RPL40BYKR094C VPS41P38959 992 aa2.67□□□□□ -1.98
RPL40BYKR094C ASG1P40467 964 aa2.67□□□□□ -1.98
RPL40BYKR094C GPP1P41277 250 aaKnown RBP2.67□□□□□ -1.98
RPL40BYKR094C IDS2P46958 469 aa2.67□□□□□ -1.98
RPL40BYKR094C IMP4P53941 290 aaKnown RBP2.67□□□□□ -1.98
RPL40BYKR094C THI3Q07471 609 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms