RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT1	YJR001W	UTP9	P38882	575 aa	Known RBP	4.59	□□□□□ -1.67
AVT1	YJR001W	VPS45	P38932	577 aa		4.59	□□□□□ -1.67
AVT1	YJR001W	STL1	P39932	569 aa		4.59	□□□□□ -1.67
AVT1	YJR001W	OSW5	P40219	148 aa		4.59	□□□□□ -1.67
AVT1	YJR001W	LSG1	P53145	640 aa	Known RBP	4.59	□□□□□ -1.67
AVT1	YJR001W	TOF1	P53840	1238 aa		4.59	□□□□□ -1.67
AVT1	YJR001W	HOS3	Q02959	697 aa	Known RBP	4.59	□□□□□ -1.67
AVT1	YJR001W	MUB1	Q03162	620 aa		4.59	□□□□□ -1.67
AVT1	YJR001W	NHX1	Q04121	633 aa		4.59	□□□□□ -1.67
AVT1	YJR001W	RBA50	Q04418	439 aa		4.59	□□□□□ -1.67
AVT1	YJR001W	YOR296W	Q08748	1289 aa		4.59	□□□□□ -1.67
AVT1	YJR001W	TGL5	Q12043	749 aa		4.59	□□□□□ -1.67
AVT1	YJR001W	PCD1	Q12524	340 aa		4.59	□□□□□ -1.67
AVT1	YJR001W	JIP3	O13555	125 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	GCN4	P03069	281 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	APE1	P14904	514 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	SPE2	P21182	396 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	NPP1	P25353	742 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	BMH1	P29311	267 aa	Known RBP	4.58	□□□□□ -1.68
AVT1	YJR001W	KAP122	P32767	1081 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	BCK2	P33306	851 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	CSE1	P33307	960 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	GCS1	P35197	352 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	PCH2	P38126	564 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	ERT1	P38140	529 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	SAW1	P39735	261 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	YFL052W	P43551	465 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	SNF12	P53628	566 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	YNR061C	P53747	219 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	EOS1	P53938	366 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	RPM2	Q02773	1202 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	UBX2	Q04228	584 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	PDS5	Q04264	1277 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	SNO4	Q04902	237 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	RSF1	Q05043	376 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	EST2	Q06163	884 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	NOP6	Q07623	225 aa	Known RBP	4.58	□□□□□ -1.68
AVT1	YJR001W	MET7	Q08645	548 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	HSP33	Q08914	237 aa	Known RBP	4.58	□□□□□ -1.68
AVT1	YJR001W	HSP32	Q08992	237 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	NSI1	Q12457	570 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	DED1	P06634	604 aa	Known RBP	4.58	□□□□□ -1.68
AVT1	YJR001W	ADH4	P10127	382 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	YAP1	P19880	650 aa	Known RBP	4.58	□□□□□ -1.68
AVT1	YJR001W	UBC6	P33296	250 aa	Predicted RBP	4.58	□□□□□ -1.68
AVT1	YJR001W	EXO5	P38289	585 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	MTG2	P38860	518 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	UTP7	P40055	554 aa	Known RBP	4.58	□□□□□ -1.68
AVT1	YJR001W	SPO22	P40511	975 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	PKP1	P40530	394 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	FET5	P43561	622 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	APS3	P47064	194 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	URB2	P47108	1174 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	SSN8	P47821	323 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	LYS4	P49367	693 aa	Predicted RBP	4.58	□□□□□ -1.68
AVT1	YJR001W	DAM1	P53267	343 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	VPS75	P53853	264 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	IPI3	P53877	555 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	AIM32	Q04689	311 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	GTB1	Q04924	702 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	BUD20	Q08004	166 aa	Predicted RBP	4.58	□□□□□ -1.68
AVT1	YJR001W	WSC3	Q12215	556 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	MDY2	Q12285	212 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	PSY3	Q12318	242 aa		4.58	□□□□□ -1.68
AVT1	YJR001W	ARG81	P05085	880 aa		4.57	□□□□□ -1.68
AVT1	YJR001W	MOD5	P07884	428 aa		4.57	□□□□□ -1.68
AVT1	YJR001W	SSC1	P0CS90	654 aa	Known RBP	4.57	□□□□□ -1.68
AVT1	YJR001W	PRP6	P19735	899 aa	Predicted RBP	4.57	□□□□□ -1.68
AVT1	YJR001W	SAC6	P32599	642 aa	Known RBP	4.57	□□□□□ -1.68
AVT1	YJR001W	PRS1	P32895	427 aa	Known RBP	4.57	□□□□□ -1.68
AVT1	YJR001W	SUR1	P33300	382 aa		4.57	□□□□□ -1.68
AVT1	YJR001W	HCS1	P34243	683 aa		4.57	□□□□□ -1.68
AVT1	YJR001W	UBP11	P36026	717 aa		4.57	□□□□□ -1.68
AVT1	YJR001W	EMC3	P36039	253 aa		4.57	□□□□□ -1.68
AVT1	YJR001W	PGM2	P37012	569 aa	Known RBP	4.57	□□□□□ -1.68
AVT1	YJR001W	ALG14	P38242	237 aa		4.57	□□□□□ -1.68
AVT1	YJR001W	RTC3	P38804	111 aa	Predicted RBP	4.57	□□□□□ -1.68
AVT1	YJR001W	SLN1	P39928	1220 aa	Predicted RBP	4.57	□□□□□ -1.68
AVT1	YJR001W	EAF5	P39995	279 aa		4.57	□□□□□ -1.68
AVT1	YJR001W	PSF2	P40359	213 aa		4.57	□□□□□ -1.68
AVT1	YJR001W	STU2	P46675	888 aa		4.57	□□□□□ -1.68
AVT1	YJR001W	ALT1	P52893	592 aa		4.57	□□□□□ -1.68
AVT1	YJR001W	YML108W	Q03759	105 aa		4.57	□□□□□ -1.68
AVT1	YJR001W	GYL1	Q04322	720 aa		4.57	□□□□□ -1.68
AVT1	YJR001W	DUS3	Q06053	668 aa	Known RBP	4.57	□□□□□ -1.68
AVT1	YJR001W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
AVT1	YJR001W	BUD7	Q08754	746 aa		4.57	□□□□□ -1.68
AVT1	YJR001W	ACF2	Q12168	779 aa		4.57	□□□□□ -1.68
AVT1	YJR001W	MED4	Q12343	284 aa		4.57	□□□□□ -1.68
AVT1	YJR001W	NOT3	P06102	836 aa	Known RBP	4.56	□□□□□ -1.68
AVT1	YJR001W	TPK1	P06244	397 aa		4.56	□□□□□ -1.68
AVT1	YJR001W	POL3	P15436	1097 aa		4.56	□□□□□ -1.68
AVT1	YJR001W	MRPL8	P22353	238 aa		4.56	□□□□□ -1.68
AVT1	YJR001W	PER1	P25625	357 aa		4.56	□□□□□ -1.68
AVT1	YJR001W	MEI4	P29467	408 aa		4.56	□□□□□ -1.68
AVT1	YJR001W	VPH2	P32341	215 aa		4.56	□□□□□ -1.68
AVT1	YJR001W	DOA4	P32571	926 aa		4.56	□□□□□ -1.68
AVT1	YJR001W	LOT5	P34234	306 aa		4.56	□□□□□ -1.68
AVT1	YJR001W	YPT52	P36018	234 aa	Known RBP	4.56	□□□□□ -1.68
AVT1	YJR001W	SDS22	P36047	338 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 40 ms