RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C HEM12P32347 362 aaPredicted RBP8.86□□□□□ -0.99
SSL2YIL143C UTR4P32626 227 aa8.86□□□□□ -0.99
SSL2YIL143C SNL1P40548 159 aa8.86□□□□□ -0.99
SSL2YIL143C YKR005CQ02203 525 aa8.86□□□□□ -0.99
SSL2YIL143C RKM2Q03942 479 aa8.86□□□□□ -0.99
SSL2YIL143C GID7P25569 745 aa8.85□□□□□ -0.99
SSL2YIL143C BCK2P33306 851 aa8.85□□□□□ -0.99
SSL2YIL143C APE4P38821 490 aa8.85□□□□□ -0.99
SSL2YIL143C AVT2P39981 480 aa8.85□□□□□ -0.99
SSL2YIL143C PEA2P40091 420 aa8.85□□□□□ -0.99
SSL2YIL143C STB1P42845 420 aa8.85□□□□□ -0.99
SSL2YIL143C CIR2Q08822 631 aa8.85□□□□□ -0.99
SSL2YIL143C YIG1Q08956 461 aa8.85□□□□□ -0.99
SSL2YIL143C ZPS1Q12512 249 aa8.85□□□□□ -0.99
SSL2YIL143C STE2D6VTK4 431 aa8.85□□□□□ -0.99
SSL2YIL143C ASP3-2P0CX77 362 aa8.85□□□□□ -0.99
SSL2YIL143C ASP3-3P0CX78 362 aa8.85□□□□□ -0.99
SSL2YIL143C ASP3-4P0CX79 362 aa8.85□□□□□ -0.99
SSL2YIL143C ASP3-1P0CZ17 362 aa8.85□□□□□ -0.99
SSL2YIL143C PUT4P15380 627 aa8.85□□□□□ -0.99
SSL2YIL143C MSS116P15424 664 aaKnown RBP8.85□□□□□ -0.99
SSL2YIL143C GIP1P38229 639 aa8.85□□□□□ -0.99
SSL2YIL143C NNF1P47149 201 aa8.85□□□□□ -0.99
SSL2YIL143C LDB17Q12342 491 aa8.85□□□□□ -0.99
SSL2YIL143C PAB1P04147 577 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
SSL2YIL143C EAP1P36041 632 aaKnown RBP8.84□□□□□ -0.99
SSL2YIL143C FES1P38260 290 aa8.84□□□□□ -0.99
SSL2YIL143C YER156CP40093 338 aaKnown RBP8.84□□□□□ -0.99
SSL2YIL143C MND1P53102 219 aa8.84□□□□□ -0.99
SSL2YIL143C REX2P54964 269 aaKnown RBP8.84□□□□□ -0.99
SSL2YIL143C HEL2Q05580 639 aaKnown RBP8.84□□□□□ -0.99
SSL2YIL143C ENT2Q05785 613 aa8.84□□□□□ -0.99
SSL2YIL143C CHS5Q12114 671 aaKnown RBP8.84□□□□□ -0.99
SSL2YIL143C PHA2P32452 334 aa8.84□□□□□ -0.99
SSL2YIL143C FRE1P32791 686 aa8.84□□□□□ -0.99
SSL2YIL143C SRB2P34162 210 aa8.84□□□□□ -0.99
SSL2YIL143C MUM2P38236 366 aa8.84□□□□□ -0.99
SSL2YIL143C HMF1P40037 129 aaKnown RBP8.84□□□□□ -0.99
SSL2YIL143C UBP7P40453 1071 aa8.84□□□□□ -0.99
SSL2YIL143C LEM3P42838 414 aa8.84□□□□□ -0.99
SSL2YIL143C ACF4P47129 309 aa8.84□□□□□ -0.99
SSL2YIL143C TAF11Q04226 346 aa8.84□□□□□ -0.99
SSL2YIL143C PEX15Q08215 383 aa8.84□□□□□ -0.99
SSL2YIL143C RPN8Q08723 338 aaKnown RBP8.84□□□□□ -0.99
SSL2YIL143C YMR030W-AQ3E760 96 aa8.84□□□□□ -0.99
SSL2YIL143C TKL1P23254 680 aaKnown RBP8.83□□□□□ -1
SSL2YIL143C CLB2P24869 491 aa8.83□□□□□ -1
SSL2YIL143C MRP8P35719 219 aa8.83□□□□□ -1
SSL2YIL143C MMS4P38257 691 aa8.83□□□□□ -1
SSL2YIL143C GTT3P39996 337 aa8.83□□□□□ -1
SSL2YIL143C TRF5P48561 642 aaKnown RBP8.83□□□□□ -1
SSL2YIL143C SQS1P53866 767 aaKnown RBP8.83□□□□□ -1
SSL2YIL143C SMP3Q04174 516 aa8.83□□□□□ -1
SSL2YIL143C THI20Q08224 551 aa8.83□□□□□ -1
SSL2YIL143C YVC1Q12324 675 aa8.83□□□□□ -1
SSL2YIL143C ERP3Q12403 225 aa8.83□□□□□ -1
SSL2YIL143C PCD1Q12524 340 aa8.83□□□□□ -1
SSL2YIL143C AI5_ALPHAQ9ZZX1 630 aa8.83□□□□□ -1
SSL2YIL143C BZZ1P38822 633 aa8.83□□□□□ -1
SSL2YIL143C YEL025CP39991 1188 aa8.83□□□□□ -1
SSL2YIL143C IRR1P40541 1150 aa8.83□□□□□ -1
SSL2YIL143C MAF1P41910 395 aa8.83□□□□□ -1
SSL2YIL143C RFX1P48743 811 aa8.83□□□□□ -1
SSL2YIL143C ESF2P53743 316 aaKnown RBP8.83□□□□□ -1
SSL2YIL143C INA17Q02888 182 aa8.83□□□□□ -1
SSL2YIL143C SGT2Q12118 346 aaKnown RBP8.83□□□□□ -1
SSL2YIL143C YDR461C-AQ2V2P7 80 aa8.83□□□□□ -1
SSL2YIL143C VCX1Q99385 411 aa8.83□□□□□ -1
SSL2YIL143C CAR1P00812 333 aaKnown RBP8.82□□□□□ -1
SSL2YIL143C COR1P07256 457 aa8.82□□□□□ -1
SSL2YIL143C ERR1P0CX10 437 aa8.82□□□□□ -1
SSL2YIL143C ERR2P0CX11 437 aa8.82□□□□□ -1
SSL2YIL143C RAD16P31244 790 aa8.82□□□□□ -1
SSL2YIL143C UTR2P32623 467 aa8.82□□□□□ -1
SSL2YIL143C SRL3P36167 246 aa8.82□□□□□ -1
SSL2YIL143C CRP1P38845 465 aaKnown RBP8.82□□□□□ -1
SSL2YIL143C ERR3P42222 437 aa8.82□□□□□ -1
SSL2YIL143C MRK1P50873 501 aa8.82□□□□□ -1
SSL2YIL143C HOS2P53096 452 aaPredicted RBP8.82□□□□□ -1
SSL2YIL143C PEX29Q03370 554 aa8.82□□□□□ -1
SSL2YIL143C THI21Q08975 551 aa8.82□□□□□ -1
SSL2YIL143C YOR342CQ12182 319 aa8.82□□□□□ -1
SSL2YIL143C IZH4Q99393 312 aa8.82□□□□□ -1
SSL2YIL143C RHO2P06781 192 aa8.82□□□□□ -1
SSL2YIL143C KAR1P11927 433 aa8.82□□□□□ -1
SSL2YIL143C RDH54P38086 958 aa8.82□□□□□ -1
SSL2YIL143C YBR138CP38277 524 aa8.82□□□□□ -1
SSL2YIL143C MNP1P53163 194 aaPredicted RBP8.82□□□□□ -1
SSL2YIL143C ALG12P53730 551 aa8.82□□□□□ -1
SSL2YIL143C CUS2P53830 285 aaPredicted RBP8.82□□□□□ -1
SSL2YIL143C DOT1Q04089 582 aaKnown RBP8.82□□□□□ -1
SSL2YIL143C DYN3Q04949 312 aa8.82□□□□□ -1
SSL2YIL143C TPO1Q07824 586 aa8.82□□□□□ -1
SSL2YIL143C YCL068CP25593 260 aa8.81□□□□□ -1
SSL2YIL143C UGP1P32861 499 aaKnown RBP8.81□□□□□ -1
SSL2YIL143C PTC1P35182 281 aa8.81□□□□□ -1
SSL2YIL143C ATG12P38316 186 aa8.81□□□□□ -1
SSL2YIL143C MEP1P40260 492 aa8.81□□□□□ -1
SSL2YIL143C INP51P40559 946 aaKnown RBP8.81□□□□□ -1
SSL2YIL143C CCT8P47079 568 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 79.8 ms