RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDR1	YGR100W	URA3	P03962	267 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	GPH1	P06738	902 aa	Known RBP	4.66	□□□□□ -1.66
MDR1	YGR100W	PUT2	P07275	575 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	CDC24	P11433	854 aa	Predicted RBP	4.66	□□□□□ -1.66
MDR1	YGR100W	RRT12	P25381	491 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	NTR2	P36118	322 aa	Predicted RBP	4.66	□□□□□ -1.66
MDR1	YGR100W	ERT1	P38140	529 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	RXT2	P38255	430 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	YGL108C	P53139	140 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	CAF120	P53836	1060 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	DID2	P69771	204 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	HPC2	Q01448	625 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	SRL4	Q03085	281 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	ASA1	Q06822	443 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	DIS3	Q08162	1001 aa	Known RBP	4.66	□□□□□ -1.66
MDR1	YGR100W	NTG2	Q08214	380 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	RAX1	Q08760	435 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	YPL191C	Q08930	360 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	YPR202W	Q08993	238 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	GET3	Q12154	354 aa	Known RBP	4.66	□□□□□ -1.66
MDR1	YGR100W	RAD59	Q12223	238 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	SKM1	Q12469	655 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	TSC13	Q99190	310 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	IPP1	P00817	287 aa	Known RBP	4.66	□□□□□ -1.66
MDR1	YGR100W	PRI1	P10363	409 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	MRP13	P12686	339 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	DBP5	P20449	482 aa	Known RBP	4.66	□□□□□ -1.66
MDR1	YGR100W	LYP1	P32487	611 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	NIC96	P34077	839 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	STB6	P36085	766 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	RFS1	P38234	210 aa	Known RBP	4.66	□□□□□ -1.66
MDR1	YGR100W	BSD2	P38356	321 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	CBR1	P38626	284 aa	Known RBP	4.66	□□□□□ -1.66
MDR1	YGR100W	RRP8	P38961	392 aa	Known RBP	4.66	□□□□□ -1.66
MDR1	YGR100W	HAL5	P38970	855 aa	Known RBP	4.66	□□□□□ -1.66
MDR1	YGR100W	AKR1	P39010	764 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	TRF5	P48561	642 aa	Known RBP	4.66	□□□□□ -1.66
MDR1	YGR100W	ASE1	P50275	885 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	CAF40	P53829	373 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	UTP6	Q02354	440 aa	Known RBP	4.66	□□□□□ -1.66
MDR1	YGR100W	HAS1	Q03532	505 aa	Known RBP	4.66	□□□□□ -1.66
MDR1	YGR100W	URC2	Q04411	772 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	ICL2	Q12031	575 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	MED2	Q12124	431 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	YOR131C	Q12486	218 aa		4.66	□□□□□ -1.66
MDR1	YGR100W	STE3	P06783	470 aa		4.65	□□□□□ -1.66
MDR1	YGR100W	PDC5	P16467	563 aa	Known RBP	4.65	□□□□□ -1.66
MDR1	YGR100W	SNT1	P25357	1226 aa		4.65	□□□□□ -1.66
MDR1	YGR100W	IMP3	P32899	183 aa	Predicted RBP	4.65	□□□□□ -1.66
MDR1	YGR100W	SRP101	P32916	621 aa		4.65	□□□□□ -1.66
MDR1	YGR100W	RPT3	P33298	428 aa	Known RBP	4.65	□□□□□ -1.66
MDR1	YGR100W	ETR1	P38071	380 aa		4.65	□□□□□ -1.66
MDR1	YGR100W	CHK1	P38147	527 aa		4.65	□□□□□ -1.66
MDR1	YGR100W	SER3	P40054	469 aa		4.65	□□□□□ -1.66
MDR1	YGR100W	MMM1	P41800	426 aa		4.65	□□□□□ -1.66
MDR1	YGR100W	EMC2	P47133	292 aa	Known RBP	4.65	□□□□□ -1.66
MDR1	YGR100W	MRPL50	P53724	139 aa		4.65	□□□□□ -1.66
MDR1	YGR100W	ACS1	Q01574	713 aa		4.65	□□□□□ -1.66
MDR1	YGR100W	YDR278C	Q05612	105 aa		4.65	□□□□□ -1.66
MDR1	YGR100W	CRR1	Q05790	422 aa		4.65	□□□□□ -1.66
MDR1	YGR100W	BCP1	Q06338	283 aa		4.65	□□□□□ -1.66
MDR1	YGR100W	YDR306C	Q06640	478 aa		4.65	□□□□□ -1.66
MDR1	YGR100W	PUS7	Q08647	676 aa	Known RBP	4.65	□□□□□ -1.66
MDR1	YGR100W	GAL1	P04385	528 aa		4.65	□□□□□ -1.67
MDR1	YGR100W	SIR3	P06701	978 aa		4.65	□□□□□ -1.67
MDR1	YGR100W	ILV2	P07342	687 aa	Known RBP	4.65	□□□□□ -1.67
MDR1	YGR100W	NUC1	P08466	329 aa		4.65	□□□□□ -1.67
MDR1	YGR100W	RAP1	P11938	827 aa		4.65	□□□□□ -1.67
MDR1	YGR100W	HMG2	P12684	1045 aa		4.65	□□□□□ -1.67
MDR1	YGR100W	GFD2	P25370	566 aa	Known RBP	4.65	□□□□□ -1.67
MDR1	YGR100W	CIN8	P27895	1000 aa		4.65	□□□□□ -1.67
MDR1	YGR100W	HEM3	P28789	327 aa		4.65	□□□□□ -1.67
MDR1	YGR100W	ASF2	P32448	525 aa	Predicted RBP	4.65	□□□□□ -1.67
MDR1	YGR100W	MRT4	P33201	236 aa	Known RBP	4.65	□□□□□ -1.67
MDR1	YGR100W	ANR2	P36090	516 aa	Predicted RBP	4.65	□□□□□ -1.67
MDR1	YGR100W	YKL023W	P36103	277 aa	Known RBP	4.65	□□□□□ -1.67
MDR1	YGR100W	GLO3	P38682	493 aa	Known RBP	4.65	□□□□□ -1.67
MDR1	YGR100W	SMF2	P38778	549 aa		4.65	□□□□□ -1.67
MDR1	YGR100W	YJL070C	P40361	888 aa		4.65	□□□□□ -1.67
MDR1	YGR100W	CST6	P40535	587 aa		4.65	□□□□□ -1.67
MDR1	YGR100W	ROG3	P43602	733 aa		4.65	□□□□□ -1.67
MDR1	YGR100W	IRC5	P43610	853 aa		4.65	□□□□□ -1.67
MDR1	YGR100W	SIW14	P53965	281 aa		4.65	□□□□□ -1.67
MDR1	YGR100W	MRPL13	Q02204	264 aa		4.65	□□□□□ -1.67
MDR1	YGR100W	GYP1	Q08484	637 aa		4.65	□□□□□ -1.67
MDR1	YGR100W	RCN2	Q12044	265 aa		4.65	□□□□□ -1.67
MDR1	YGR100W	APC1	P53886	1748 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	IDI1	P15496	288 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	HXT2	P23585	541 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	YKL077W	P36081	392 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	TGL4	P36165	910 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	ERG7	P38604	731 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	LNP1	P38878	278 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	SEO1	P39709	593 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	MXR1	P40029	184 aa		4.64	□□□□□ -1.67
MDR1	YGR100W	YMR147W	P40218	223 aa	Known RBP	4.64	□□□□□ -1.67
MDR1	YGR100W	PFK26	P40433	827 aa	Known RBP	4.64	□□□□□ -1.67
MDR1	YGR100W	SEC28	P40509	296 aa	Known RBP	4.64	□□□□□ -1.67
MDR1	YGR100W	YIL055C	P40523	627 aa	Known RBP	4.64	□□□□□ -1.67
MDR1	YGR100W	YGR210C	P42942	411 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms