RNA–Protein interactions for RNA: YDR064W

RPS13, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS13, Length 456 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS13	YDR064W	LSM1	P47017	172 aa	Known RBP	3.99	□□□□□ -1.77
RPS13	YDR064W	NCS6	P53088	359 aa		3.99	□□□□□ -1.77
RPS13	YDR064W	BUD9	P53226	547 aa		3.99	□□□□□ -1.77
RPS13	YDR064W	YGR054W	P53235	642 aa	Known RBP	3.99	□□□□□ -1.77
RPS13	YDR064W	YNR063W	P53749	607 aa		3.99	□□□□□ -1.77
RPS13	YDR064W	TOF1	P53840	1238 aa		3.99	□□□□□ -1.77
RPS13	YDR064W	HDA1	P53973	706 aa		3.99	□□□□□ -1.77
RPS13	YDR064W	MUK1	Q02866	612 aa		3.99	□□□□□ -1.77
RPS13	YDR064W	TRS130	Q03660	1102 aa		3.99	□□□□□ -1.77
RPS13	YDR064W	GYL1	Q04322	720 aa		3.99	□□□□□ -1.77
RPS13	YDR064W	EMI2	Q04409	500 aa	Known RBP	3.99	□□□□□ -1.77
RPS13	YDR064W	COX20	Q04935	205 aa		3.99	□□□□□ -1.77
RPS13	YDR064W	YCS4	Q06156	1176 aa		3.99	□□□□□ -1.77
RPS13	YDR064W	PHO92	Q06390	306 aa		3.99	□□□□□ -1.77
RPS13	YDR064W	GRS2	Q06817	618 aa		3.99	□□□□□ -1.77
RPS13	YDR064W	YOR296W	Q08748	1289 aa		3.99	□□□□□ -1.77
RPS13	YDR064W	THP3	Q12049	470 aa	Known RBP	3.99	□□□□□ -1.77
RPS13	YDR064W	ATG29	Q12092	213 aa		3.99	□□□□□ -1.77
RPS13	YDR064W	BBP1	Q12365	385 aa		3.99	□□□□□ -1.77
RPS13	YDR064W	SNU23	Q12368	194 aa	Predicted RBP	3.99	□□□□□ -1.77
RPS13	YDR064W	ARP6	Q12509	438 aa		3.99	□□□□□ -1.77
RPS13	YDR064W	YBL113C	Q7M4S9	792 aa		3.99	□□□□□ -1.77
RPS13	YDR064W	UTP10	P42945	1769 aa	Known RBP	3.99	□□□□□ -1.77
RPS13	YDR064W	HXK1	P04806	485 aa	Known RBP	3.98	□□□□□ -1.77
RPS13	YDR064W	MATALPHA2	P0CY08	210 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	HMLALPHA2	P0CY09	210 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	SBP1	P10080	294 aa	Known RBP	3.98	□□□□□ -1.77
RPS13	YDR064W	RAP1	P11938	827 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	MSD1	P15179	658 aa	Known RBP	3.98	□□□□□ -1.77
RPS13	YDR064W	PRP16	P15938	1071 aa	Predicted RBP	3.98	□□□□□ -1.77
RPS13	YDR064W	URA4	P20051	364 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	VPS34	P22543	875 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	CDC15	P27636	974 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	NAM7	P30771	971 aa	Known RBP	3.98	□□□□□ -1.77
RPS13	YDR064W	HMX1	P32339	317 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	SCT1	P32784	759 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	MGM101	P32787	269 aa	Known RBP	3.98	□□□□□ -1.77
RPS13	YDR064W	TYE7	P33122	291 aa	Predicted RBP	3.98	□□□□□ -1.77
RPS13	YDR064W	GDH2	P33327	1092 aa	Known RBP	3.98	□□□□□ -1.77
RPS13	YDR064W	LOS1	P33418	1100 aa	Predicted RBP	3.98	□□□□□ -1.77
RPS13	YDR064W	KTR2	P33550	425 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
RPS13	YDR064W	BCD1	P38772	366 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	CRP1	P38845	465 aa	Known RBP	3.98	□□□□□ -1.77
RPS13	YDR064W	TDA11	P38854	504 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	SLM1	P40485	686 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	SHQ1	P40486	507 aa	Predicted RBP	3.98	□□□□□ -1.77
RPS13	YDR064W	YIL077C	P40508	320 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	MND2	P40577	368 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	UFE1	P41834	346 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	GPD2	P41911	440 aa	Known RBP	3.98	□□□□□ -1.77
RPS13	YDR064W	GYP8	P43570	497 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	POL31	P46957	487 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	POL32	P47110	350 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	YJR054W	P47114	497 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
RPS13	YDR064W	HEF3	P53978	1044 aa	Known RBP	3.98	□□□□□ -1.77
RPS13	YDR064W	MET14	Q02196	202 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	IRC4	Q03036	179 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	HMO1	Q03973	246 aa	Known RBP	3.98	□□□□□ -1.77
RPS13	YDR064W	RPN9	Q04062	393 aa	Known RBP	3.98	□□□□□ -1.77
RPS13	YDR064W	STE23	Q06010	1027 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	GMC2	Q06201	188 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	DXO1	Q06349	442 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	YCG1	Q06680	1035 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	REH1	Q06709	432 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	YPR091C	Q06833	770 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	FAP7	Q12055	197 aa	Predicted RBP	3.98	□□□□□ -1.77
RPS13	YDR064W	RTR2	Q12378	196 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	MPD2	Q99316	277 aa		3.98	□□□□□ -1.77
RPS13	YDR064W	SNQ2	P32568	1501 aa	Known RBP	3.97	□□□□□ -1.77
RPS13	YDR064W	PDR12	Q02785	1511 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	FBP1	P09201	348 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	TRL1	P09880	827 aa	Known RBP	3.97	□□□□□ -1.77
RPS13	YDR064W	SRS2	P12954	1174 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	PMR1	P13586	950 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	SEC63	P14906	663 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	FUS3	P16892	353 aa	Known RBP	3.97	□□□□□ -1.77
RPS13	YDR064W	PRP4	P20053	465 aa	Known RBP	3.97	□□□□□ -1.77
RPS13	YDR064W	SPE2	P21182	396 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	BUD23	P25627	275 aa	Predicted RBP	3.97	□□□□□ -1.77
RPS13	YDR064W	VMA6	P32366	345 aa	Known RBP	3.97	□□□□□ -1.77
RPS13	YDR064W	ATO2	P32907	282 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	KES1	P35844	434 aa	Known RBP	3.97	□□□□□ -1.77
RPS13	YDR064W	MYO3	P36006	1272 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	VPS21	P36017	210 aa	Known RBP	3.97	□□□□□ -1.77
RPS13	YDR064W	NUP133	P36161	1157 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	APM3	P38153	483 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	TDP1	P38319	544 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	YBR225W	P38321	900 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	RGD1	P38339	666 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	CCC2	P38995	1004 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	GIM4	P40005	111 aa	Known RBP	3.97	□□□□□ -1.77
RPS13	YDR064W	SER3	P40054	469 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	LYS14	P40971	790 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	YFH7	P43591	353 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	MNN11	P46985	422 aa	Known RBP	3.97	□□□□□ -1.77
RPS13	YDR064W	LOH1	P47055	219 aa		3.97	□□□□□ -1.77
RPS13	YDR064W	TMA22	P47089	198 aa	Predicted RBP	3.97	□□□□□ -1.77
RPS13	YDR064W	YJR107W	P47145	328 aa		3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms