RNA–Protein interactions for RNA: ENST00000641923.1

SAMMSON-223, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, human

Gene SAMMSON, Length 1,213 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMMSON-223	ENST00000641923	FGA	P02671	866 aa		10.65	□□□□□ -0.7
SAMMSON-223	ENST00000641923	CD44	P16070	742 aa	Known RBP	10.65	□□□□□ -0.7
SAMMSON-223	ENST00000641923	YY1	P25490	414 aa		10.65	□□□□□ -0.7
SAMMSON-223	ENST00000641923	TRDN	Q13061	729 aa		10.65	□□□□□ -0.7
SAMMSON-223	ENST00000641923	PICALM	Q13492	652 aa		10.65	□□□□□ -0.7
SAMMSON-223	ENST00000641923	TSGA10IP	Q3SY00	556 aa		10.65	□□□□□ -0.7
SAMMSON-223	ENST00000641923	C12orf60	Q5U649	245 aa		10.65	□□□□□ -0.7
SAMMSON-223	ENST00000641923	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.65	□□□□□ -0.7
SAMMSON-223	ENST00000641923	USP26	Q9BXU7	913 aa		10.65	□□□□□ -0.7
SAMMSON-223	ENST00000641923	DEFB129	Q9H1M3	183 aa		10.65	□□□□□ -0.7
SAMMSON-223	ENST00000641923	GINM1	Q9NU53	330 aa		10.65	□□□□□ -0.7
SAMMSON-223	ENST00000641923	FAM198A	Q9UFP1	575 aa		10.65	□□□□□ -0.7
SAMMSON-223	ENST00000641923	RBM8A	Q9Y5S9	174 aa	Known RBP	10.65	□□□□□ -0.7
SAMMSON-223	ENST00000641923	UNCX	A6NJT0	531 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	TCP10L2	B9ZVM9	353 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	USP17L12	C9JPN9	530 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	USP17L21	D6R901	530 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	PRKAB2	O43741	272 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	EGFR	P00533	1210 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	CHGB	P05060	677 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	HMGB1	P09429	215 aa	Known RBP	10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	PSMA5	P28066	241 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	HSPA4	P34932	840 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	HIRA	P54198	1017 aa	Predicted RBP	10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	PPARA	Q07869	468 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	NFIA	Q12857	509 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	RASA3	Q14644	834 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	SLFNL1	Q499Z3	407 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	CCDC178	Q5BJE1	867 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	CTR9	Q6PD62	1173 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	KRT26	Q7Z3Y9	468 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	METTL16	Q86W50	562 aa	Known RBP	10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	CSRNP1	Q96S65	589 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	MTA3	Q9BTC8	594 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	KRT23	Q9C075	422 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	CREBZF	Q9NS37	354 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	SERPINB13	Q9UIV8	391 aa		10.64	□□□□□ -0.71
SAMMSON-223	ENST00000641923	ORC4	O43929	436 aa		10.63	□□□□□ -0.71
SAMMSON-223	ENST00000641923	FKBP1B	P68106	108 aa		10.63	□□□□□ -0.71
SAMMSON-223	ENST00000641923	PTH1R	Q03431	593 aa		10.63	□□□□□ -0.71
SAMMSON-223	ENST00000641923	NECTIN1	Q15223	517 aa		10.63	□□□□□ -0.71
SAMMSON-223	ENST00000641923	VPS53	Q5VIR6	699 aa		10.63	□□□□□ -0.71
SAMMSON-223	ENST00000641923	MFSD6	Q6ZSS7	791 aa		10.63	□□□□□ -0.71
SAMMSON-223	ENST00000641923	STAG1	Q8WVM7	1258 aa		10.63	□□□□□ -0.71
SAMMSON-223	ENST00000641923	CCDC17	Q96LX7	622 aa		10.63	□□□□□ -0.71
SAMMSON-223	ENST00000641923	IL25	Q9H293	177 aa		10.63	□□□□□ -0.71
SAMMSON-223	ENST00000641923	DDX4	Q9NQI0	724 aa	Known RBP	10.63	□□□□□ -0.71
SAMMSON-223	ENST00000641923	CNTNAP1	P78357	1384 aa		10.63	□□□□□ -0.71
SAMMSON-223	ENST00000641923	MINDY4B	A8MYZ0	360 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	PPP1R12B	O60237	982 aa	Predicted RBP	10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	FGR	P09769	529 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	RBM25	P49756	843 aa	Known RBP	10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	MAP3K10	Q02779	954 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	TCP10	Q12799	353 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	AKNAD1	Q5T1N1	836 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	CREB3L3	Q68CJ9	461 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	C16orf86	Q6ZW13	317 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	RALYL	Q86SE5	291 aa	Known RBP	10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	SMC1B	Q8NDV3	1235 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	NCOA7	Q8NI08	942 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	RBM46	Q8TBY0	533 aa	Known RBP	10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	ESR2	Q92731	530 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	KCNB2	Q92953	911 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	IL17RA	Q96F46	866 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	ZNF341	Q9BYN7	854 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	C22orf23	Q9BZE7	217 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	MKNK2	Q9HBH9	465 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	NMRK2	Q9NPI5	230 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	PALD1	Q9ULE6	856 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	PCDHAC2	Q9Y5I4	1007 aa		10.62	□□□□□ -0.71
SAMMSON-223	ENST00000641923	TRPM7	Q96QT4	1865 aa		10.61	□□□□□ -0.71
SAMMSON-223	ENST00000641923	SLC27A2	O14975	620 aa		10.61	□□□□□ -0.71
SAMMSON-223	ENST00000641923	FOXP2	O15409	715 aa		10.61	□□□□□ -0.71
SAMMSON-223	ENST00000641923	TOMM70	O94826	608 aa		10.61	□□□□□ -0.71
SAMMSON-223	ENST00000641923	CACNB3	P54284	484 aa		10.61	□□□□□ -0.71
SAMMSON-223	ENST00000641923	FSTL1	Q12841	308 aa		10.61	□□□□□ -0.71
SAMMSON-223	ENST00000641923	SART3	Q15020	963 aa	Known RBP	10.61	□□□□□ -0.71
SAMMSON-223	ENST00000641923	ARMC9	Q7Z3E5	817 aa		10.61	□□□□□ -0.71
SAMMSON-223	ENST00000641923	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.61	□□□□□ -0.71
SAMMSON-223	ENST00000641923	ZNF526	Q8TF50	670 aa	Predicted RBP	10.61	□□□□□ -0.71
SAMMSON-223	ENST00000641923	TBC1D2	Q9BYX2	928 aa		10.61	□□□□□ -0.71
SAMMSON-223	ENST00000641923	TM6SF1	Q9BZW5	370 aa		10.61	□□□□□ -0.71
SAMMSON-223	ENST00000641923	TMEM39B	Q9GZU3	492 aa		10.61	□□□□□ -0.71
SAMMSON-223	ENST00000641923	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
SAMMSON-223	ENST00000641923	WDR19	Q8NEZ3	1342 aa		10.6	□□□□□ -0.71
SAMMSON-223	ENST00000641923	DDTL	A6NHG4	134 aa	Predicted RBP	10.6	□□□□□ -0.71
SAMMSON-223	ENST00000641923	CYP21A2	P08686	494 aa		10.6	□□□□□ -0.71
SAMMSON-223	ENST00000641923	IREB2	P48200	963 aa	Known RBP	10.6	□□□□□ -0.71
SAMMSON-223	ENST00000641923	GABPA	Q06546	454 aa		10.6	□□□□□ -0.71
SAMMSON-223	ENST00000641923	TATDN1	Q6P1N9	297 aa		10.6	□□□□□ -0.71
SAMMSON-223	ENST00000641923	IQCA1	Q86XH1	822 aa		10.6	□□□□□ -0.71
SAMMSON-223	ENST00000641923	TEPSIN	Q96N21	525 aa		10.6	□□□□□ -0.71
SAMMSON-223	ENST00000641923	CABP5	Q9NP86	173 aa		10.6	□□□□□ -0.71
SAMMSON-223	ENST00000641923	SAP30BP	Q9UHR5	308 aa	Known RBP	10.6	□□□□□ -0.71
SAMMSON-223	ENST00000641923	SIPA1L1	O43166	1804 aa		10.59	□□□□□ -0.71
SAMMSON-223	ENST00000641923	ERICH2	A1L162	156 aa		10.59	□□□□□ -0.71
SAMMSON-223	ENST00000641923		E7EWF7	191 aa		10.59	□□□□□ -0.71
SAMMSON-223	ENST00000641923	CTNND1	O60716	968 aa	Known RBP	10.59	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms