RNA–Protein interactions for RNA: ENST00000640476.1

CROCCP2-207, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 1,750 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-207ENST00000640476 SHROOM1Q2M3G4 852 aaPredicted RBP24.01■■□□□ 1.43
CROCCP2-207ENST00000640476 FKBP1CQ5VVH2 108 aa24.01■■□□□ 1.43
CROCCP2-207ENST00000640476 MIGA2Q7L4E1 593 aa24.01■■□□□ 1.43
CROCCP2-207ENST00000640476 CHST3Q7LGC8 479 aa24.01■■□□□ 1.43
CROCCP2-207ENST00000640476 NPM3O75607 178 aaKnown RBP24■■□□□ 1.43
CROCCP2-207ENST00000640476 MCCP23508 829 aa24■■□□□ 1.43
CROCCP2-207ENST00000640476 RRP12Q5JTH9 1297 aaKnown RBP24■■□□□ 1.43
CROCCP2-207ENST00000640476 NBPF12Q5TAG4 269 aaPredicted RBP24■■□□□ 1.43
CROCCP2-207ENST00000640476 FAM83AQ86UY5 434 aa24■■□□□ 1.43
CROCCP2-207ENST00000640476 JAKMIP1Q96N16 626 aaKnown RBP24■■□□□ 1.43
CROCCP2-207ENST00000640476 ANAPC4Q9UJX5 808 aa24■■□□□ 1.43
CROCCP2-207ENST00000640476 ATRNL1Q5VV63 1379 aa23.99■■□□□ 1.43
CROCCP2-207ENST00000640476 RNF20Q5VTR2 975 aa23.99■■□□□ 1.43
CROCCP2-207ENST00000640476 MAP1SQ66K74 1059 aaPredicted RBP23.99■■□□□ 1.43
CROCCP2-207ENST00000640476 CLEC11AQ9Y240 323 aa23.99■■□□□ 1.43
CROCCP2-207ENST00000640476 B4E1Z4 1266 aa23.98■■□□□ 1.43
CROCCP2-207ENST00000640476 ZKSCAN1P17029 563 aaPredicted RBP23.98■■□□□ 1.43
CROCCP2-207ENST00000640476 AKNAD1Q5T1N1 836 aa23.98■■□□□ 1.43
CROCCP2-207ENST00000640476 GLIS2Q9BZE0 524 aaPredicted RBP23.98■■□□□ 1.43
CROCCP2-207ENST00000640476 TOMM22Q9NS69 142 aa23.98■■□□□ 1.43
CROCCP2-207ENST00000640476 GABPAQ06546 454 aa23.98■■□□□ 1.43
CROCCP2-207ENST00000640476 TSGA10IPQ3SY00 556 aa23.98■■□□□ 1.43
CROCCP2-207ENST00000640476 USP48Q86UV5 1035 aa23.98■■□□□ 1.43
CROCCP2-207ENST00000640476 EIF5BO60841 1220 aaKnown RBP23.97■■□□□ 1.43
CROCCP2-207ENST00000640476 CASTP20810 708 aaKnown RBP23.97■■□□□ 1.43
CROCCP2-207ENST00000640476 CDK8P49336 464 aa23.97■■□□□ 1.43
CROCCP2-207ENST00000640476 RRP1BQ14684 758 aaKnown RBP23.97■■□□□ 1.43
CROCCP2-207ENST00000640476 KRT26Q7Z3Y9 468 aa23.97■■□□□ 1.43
CROCCP2-207ENST00000640476 STAG1Q8WVM7 1258 aa23.97■■□□□ 1.43
CROCCP2-207ENST00000640476 DCPSQ96C86 337 aaKnown RBP23.97■■□□□ 1.43
CROCCP2-207ENST00000640476 LRRC2Q9BYS8 371 aa23.97■■□□□ 1.43
CROCCP2-207ENST00000640476 FAM47AQ5JRC9 791 aa23.96■■□□□ 1.43
CROCCP2-207ENST00000640476 MFSD6Q6ZSS7 791 aa23.96■■□□□ 1.43
CROCCP2-207ENST00000640476 TTC6Q86TZ1 520 aa23.96■■□□□ 1.43
CROCCP2-207ENST00000640476 APOBEC3FQ8IUX4 373 aaKnown RBP23.96■■□□□ 1.43
CROCCP2-207ENST00000640476 PI4KBQ9UBF8 816 aa23.96■■□□□ 1.43
CROCCP2-207ENST00000640476 SERPINB13Q9UIV8 391 aa23.96■■□□□ 1.43
CROCCP2-207ENST00000640476 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.96■■□□□ 1.43
CROCCP2-207ENST00000640476 ROBO3Q96MS0 1386 aa23.96■■□□□ 1.43
CROCCP2-207ENST00000640476 TNNI2P48788 182 aa23.96■■□□□ 1.43
CROCCP2-207ENST00000640476 TNFAIP1Q13829 316 aa23.96■■□□□ 1.43
CROCCP2-207ENST00000640476 C16orf86Q6ZW13 317 aa23.96■■□□□ 1.43
CROCCP2-207ENST00000640476 CYB5R4Q7L1T6 521 aa23.96■■□□□ 1.43
CROCCP2-207ENST00000640476 PNMA8AQ86V59 439 aaPredicted RBP23.96■■□□□ 1.43
CROCCP2-207ENST00000640476 DHX36Q9H2U1 1008 aaKnown RBP23.96■■□□□ 1.43
CROCCP2-207ENST00000640476 TRAF5O00463 557 aa23.95■■□□□ 1.42
CROCCP2-207ENST00000640476 HLA-DOAP06340 250 aa23.95■■□□□ 1.42
CROCCP2-207ENST00000640476 SHMT1P34896 483 aa23.95■■□□□ 1.42
CROCCP2-207ENST00000640476 AMOTL1Q8IY63 956 aa23.95■■□□□ 1.42
CROCCP2-207ENST00000640476 LARP6Q9BRS8 491 aaKnown RBP23.95■■□□□ 1.42
CROCCP2-207ENST00000640476 GPHNQ9NQX3 736 aaPredicted RBP23.95■■□□□ 1.42
CROCCP2-207ENST00000640476 SSC5DA1L4H1 1573 aa23.95■■□□□ 1.42
CROCCP2-207ENST00000640476 PITPNM2Q9BZ72 1349 aa23.94■■□□□ 1.42
CROCCP2-207ENST00000640476 KDM4AO75164 1064 aa23.94■■□□□ 1.42
CROCCP2-207ENST00000640476 ANAPC15P60006 121 aa23.94■■□□□ 1.42
CROCCP2-207ENST00000640476 SULF1Q8IWU6 871 aa23.94■■□□□ 1.42
CROCCP2-207ENST00000640476 NEK1Q96PY6 1258 aa23.94■■□□□ 1.42
CROCCP2-207ENST00000640476 ZKSCAN3Q9BRR0 538 aa23.94■■□□□ 1.42
CROCCP2-207ENST00000640476 NMT2O60551 498 aa23.93■■□□□ 1.42
CROCCP2-207ENST00000640476 CD2BP2O95400 341 aaKnown RBP23.93■■□□□ 1.42
CROCCP2-207ENST00000640476 FGRP09769 529 aa23.93■■□□□ 1.42
CROCCP2-207ENST00000640476 RASA1P20936 1047 aa23.93■■□□□ 1.42
CROCCP2-207ENST00000640476 ANTXR2P58335 489 aa23.93■■□□□ 1.42
CROCCP2-207ENST00000640476 JAG1P78504 1218 aa23.93■■□□□ 1.42
CROCCP2-207ENST00000640476 PRKG1Q13976 671 aa23.93■■□□□ 1.42
CROCCP2-207ENST00000640476 CRACR2BQ8N4Y2 399 aaPredicted RBP23.93■■□□□ 1.42
CROCCP2-207ENST00000640476 ZC3H15Q8WU90 426 aaKnown RBP23.93■■□□□ 1.42
CROCCP2-207ENST00000640476 ZSWIM5Q9P217 1185 aa23.93■■□□□ 1.42
CROCCP2-207ENST00000640476 COL2A1P02458 1487 aaPredicted RBP23.93■■□□□ 1.42
CROCCP2-207ENST00000640476 RANBP6O60518 1105 aaKnown RBP23.93■■□□□ 1.42
CROCCP2-207ENST00000640476 MB21D2Q8IYB1 491 aaPredicted RBP23.93■■□□□ 1.42
CROCCP2-207ENST00000640476 IL17RAQ96F46 866 aa23.93■■□□□ 1.42
CROCCP2-207ENST00000640476 MKNK2Q9HBH9 465 aa23.93■■□□□ 1.42
CROCCP2-207ENST00000640476 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.93■■□□□ 1.42
CROCCP2-207ENST00000640476 GPBP1L1Q9HC44 474 aaPredicted RBP23.92■■□□□ 1.42
CROCCP2-207ENST00000640476 CLEC10AQ8IUN9 316 aa23.91■■□□□ 1.42
CROCCP2-207ENST00000640476 NCOA7Q8NI08 942 aa23.91■■□□□ 1.42
CROCCP2-207ENST00000640476 EHD4Q9H223 541 aa23.91■■□□□ 1.42
CROCCP2-207ENST00000640476 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.91■■□□□ 1.42
CROCCP2-207ENST00000640476 ZSWIM6Q9HCJ5 1215 aa23.91■■□□□ 1.42
CROCCP2-207ENST00000640476 GDF11O95390 407 aa23.91■■□□□ 1.42
CROCCP2-207ENST00000640476 NEK4P51957 841 aa23.91■■□□□ 1.42
CROCCP2-207ENST00000640476 PDE4BQ07343 736 aa23.91■■□□□ 1.42
CROCCP2-207ENST00000640476 METTL16Q86W50 562 aaKnown RBP23.91■■□□□ 1.42
CROCCP2-207ENST00000640476 SENP2Q9HC62 589 aa23.91■■□□□ 1.42
CROCCP2-207ENST00000640476 AKR1B1P15121 316 aa23.9■■□□□ 1.42
CROCCP2-207ENST00000640476 RUFY3Q7L099 469 aa23.9■■□□□ 1.42
CROCCP2-207ENST00000640476 FOXP4Q8IVH2 680 aaPredicted RBP23.9■■□□□ 1.42
CROCCP2-207ENST00000640476 ORC4O43929 436 aa23.89■■□□□ 1.42
CROCCP2-207ENST00000640476 SLC3A2P08195 630 aaKnown RBP23.89■■□□□ 1.42
CROCCP2-207ENST00000640476 ANP32AP39687 249 aaKnown RBP23.89■■□□□ 1.42
CROCCP2-207ENST00000640476 TFAP4Q01664 338 aa23.89■■□□□ 1.42
CROCCP2-207ENST00000640476 KRT32Q14532 448 aa23.89■■□□□ 1.42
CROCCP2-207ENST00000640476 BLOC1S2Q6QNY1 142 aa23.89■■□□□ 1.42
CROCCP2-207ENST00000640476 MOB2Q70IA6 237 aa23.89■■□□□ 1.42
CROCCP2-207ENST00000640476 NOL8Q76FK4 1167 aaKnown RBP23.89■■□□□ 1.42
CROCCP2-207ENST00000640476 RALYLQ86SE5 291 aaKnown RBP23.89■■□□□ 1.42
CROCCP2-207ENST00000640476 CDCA5Q96FF9 252 aa23.89■■□□□ 1.42
CROCCP2-207ENST00000640476 RNF41Q9H4P4 317 aaPredicted RBP23.89■■□□□ 1.42
CROCCP2-207ENST00000640476 ATAD5Q96QE3 1844 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms