RNA–Protein interactions for RNA: ENST00000640099.1

NECAP1-224, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,313 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-224ENST00000640099 PLEKHA8P1O95397 391 aa8.83□□□□□ -1
NECAP1-224ENST00000640099 PRR29P0C7W0 189 aa8.83□□□□□ -1
NECAP1-224ENST00000640099 CEP135Q66GS9 1140 aa8.83□□□□□ -1
NECAP1-224ENST00000640099 SGMS1Q86VZ5 419 aa8.83□□□□□ -1
NECAP1-224ENST00000640099 METTL16Q86W50 562 aaKnown RBP8.83□□□□□ -1
NECAP1-224ENST00000640099 TICAM2Q86XR7 235 aa8.83□□□□□ -1
NECAP1-224ENST00000640099 STAMQ92783 540 aa8.83□□□□□ -1
NECAP1-224ENST00000640099 TMX1Q9H3N1 280 aa8.83□□□□□ -1
NECAP1-224ENST00000640099 AATFQ9NY61 560 aaKnown RBP eCLIP8.83□□□□□ -1
NECAP1-224ENST00000640099 ABCA3Q99758 1704 aa8.83□□□□□ -1
NECAP1-224ENST00000640099 COL4A1P02462 1669 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 TMEM232C9JQI7 657 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 FMNL1O95466 1100 aaPredicted RBP8.82□□□□□ -1
NECAP1-224ENST00000640099 CYP2D6P10635 497 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 CCZ1BP86790 482 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 CCZ1P86791 482 aaPredicted RBP8.82□□□□□ -1
NECAP1-224ENST00000640099 FANCCQ00597 558 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 PDE4BQ07343 736 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 CFAP100Q494V2 611 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 PARP10Q53GL7 1025 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 PPP4R3BQ5MIZ7 849 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 TBC1D9BQ66K14 1250 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 JMYQ8N9B5 988 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 FANCBQ8NB91 859 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 CDC5LQ99459 802 aaKnown RBP8.82□□□□□ -1
NECAP1-224ENST00000640099 CNNM2Q9H8M5 875 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 SERTAD1Q9UHV2 236 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 V9GY48 417 aaPredicted RBP8.82□□□□□ -1
NECAP1-224ENST00000640099 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.82□□□□□ -1
NECAP1-224ENST00000640099 USP17L12C9JPN9 530 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 USP17L21D6R901 530 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 LIFRP42702 1097 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 AKAP17AQ02040 695 aaKnown RBP8.82□□□□□ -1
NECAP1-224ENST00000640099 NCAPHQ15003 741 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 ALX1Q15699 326 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 EARS2Q5JPH6 523 aaKnown RBP8.82□□□□□ -1
NECAP1-224ENST00000640099 GPR101Q96P66 508 aaPredicted RBP8.82□□□□□ -1
NECAP1-224ENST00000640099 FANCLQ9NW38 375 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 NUP98P52948 1817 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 MMP1P03956 469 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 IFNAR1P17181 557 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 AFMP43652 599 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 PTPN14Q15678 1187 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 KLHL10Q6JEL2 608 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 ARMCX5Q6P1M9 558 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 FAM177A1Q8N128 213 aaPredicted RBP8.82□□□□□ -1
NECAP1-224ENST00000640099 CRACR2BQ8N4Y2 399 aaPredicted RBP8.82□□□□□ -1
NECAP1-224ENST00000640099 CCDC112Q8NEF3 446 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 STAG1Q8WVM7 1258 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 MINPP1Q9UNW1 487 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 WDR19Q8NEZ3 1342 aa8.82□□□□□ -1
NECAP1-224ENST00000640099 WNT7AO00755 349 aa8.81□□□□□ -1
NECAP1-224ENST00000640099 U2AF2P26368 475 aaKnown RBP eCLIP8.81□□□□□ -13e-6■■■■□ 23.7
NECAP1-224ENST00000640099 PRDX5P30044 214 aa8.81□□□□□ -1
NECAP1-224ENST00000640099 CDC25BP30305 580 aa8.81□□□□□ -1
NECAP1-224ENST00000640099 TPM4P67936 248 aa8.81□□□□□ -1
NECAP1-224ENST00000640099 CAVIN4Q5BKX8 364 aa8.81□□□□□ -1
NECAP1-224ENST00000640099 KRI1Q8N9T8 703 aaKnown RBP8.81□□□□□ -1
NECAP1-224ENST00000640099 ZNF384Q8TF68 577 aa8.81□□□□□ -1
NECAP1-224ENST00000640099 SHISA4Q96DD7 197 aa8.81□□□□□ -1
NECAP1-224ENST00000640099 FAM84BQ96KN1 310 aaPredicted RBP8.81□□□□□ -1
NECAP1-224ENST00000640099 C8orf37Q96NL8 207 aa8.81□□□□□ -1
NECAP1-224ENST00000640099 SPEF2Q9C093 1822 aa8.81□□□□□ -1
NECAP1-224ENST00000640099 ATRNO75882 1429 aa8.81□□□□□ -1
NECAP1-224ENST00000640099 VEGFAP15692 232 aaPredicted RBP8.81□□□□□ -1
NECAP1-224ENST00000640099 BMP6P22004 513 aa8.81□□□□□ -1
NECAP1-224ENST00000640099 UBASH3AP57075 661 aa8.81□□□□□ -1
NECAP1-224ENST00000640099 IFIT1BQ5T764 474 aaKnown RBP8.81□□□□□ -1
NECAP1-224ENST00000640099 RESP18Q5W5W9 173 aa8.81□□□□□ -1
NECAP1-224ENST00000640099 KRBA2Q6ZNG9 492 aa8.81□□□□□ -1
NECAP1-224ENST00000640099 TXNRD3Q86VQ6 643 aa8.81□□□□□ -1
NECAP1-224ENST00000640099 ENAHQ8N8S7 591 aaPredicted RBP8.81□□□□□ -1
NECAP1-224ENST00000640099 GNL3LQ9NVN8 582 aaKnown RBP8.81□□□□□ -1
NECAP1-224ENST00000640099 SFPQP23246 707 aaKnown RBP eCLIP8.8□□□□□ -1
NECAP1-224ENST00000640099 STX17P56962 302 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 ZNF174Q15697 407 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 OLFM4Q6UX06 510 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 CREBRFQ8IUR6 639 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 PDCL2Q8N4E4 241 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 ESR2Q92731 530 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 DHX58Q96C10 678 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 EPSTI1Q96J88 318 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 HPSEQ9Y251 543 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 ZNF652Q9Y2D9 606 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 CUTAO60888 179 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 PPP6R2O75170 966 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 GNAT2P19087 354 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 TAF1P21675 1872 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 AMIGO3Q86WK7 504 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 CSRNP2Q9H175 543 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 GNPATO15228 680 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 CDK11BP21127 795 aaKnown RBP8.8□□□□□ -1
NECAP1-224ENST00000640099 RBM6P78332 1123 aaKnown RBP8.8□□□□□ -1
NECAP1-224ENST00000640099 NBPF5PQ86XG9 351 aaPredicted RBP8.8□□□□□ -1
NECAP1-224ENST00000640099 SMYD4Q8IYR2 804 aaPredicted RBP8.8□□□□□ -1
NECAP1-224ENST00000640099 KLHL34Q8N239 644 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 HSD3B7Q9H2F3 369 aa8.8□□□□□ -1
NECAP1-224ENST00000640099 RNF41Q9H4P4 317 aaPredicted RBP8.8□□□□□ -1
NECAP1-224ENST00000640099 COL1A1P02452 1464 aaPredicted RBP8.79□□□□□ -1
NECAP1-224ENST00000640099 MYH7P12883 1935 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms