RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 QRICH2Q9H0J4 1663 aa8.3□□□□□ -1.08
ATM-229ENST00000639953 USP32Q8NFA0 1604 aa8.3□□□□□ -1.08
ATM-229ENST00000639953 KRTAP9-6A0A140TA67 174 aa8.3□□□□□ -1.08
ATM-229ENST00000639953 RPLP1P05386 114 aaKnown RBP8.3□□□□□ -1.08
ATM-229ENST00000639953 CENPBP07199 599 aaPredicted RBP8.3□□□□□ -1.08
ATM-229ENST00000639953 MZF1P28698 734 aaPredicted RBP8.3□□□□□ -1.08
ATM-229ENST00000639953 CCDC82Q8N4S0 544 aa8.3□□□□□ -1.08
ATM-229ENST00000639953 ADGRB2O60241 1585 aa8.3□□□□□ -1.08
ATM-229ENST00000639953 PDE2AO00408 941 aaPredicted RBP8.29□□□□□ -1.08
ATM-229ENST00000639953 IGLV1-40P01703 118 aa8.29□□□□□ -1.08
ATM-229ENST00000639953 PCSK2P16519 638 aa8.29□□□□□ -1.08
ATM-229ENST00000639953 SLC51AQ86UW1 340 aa8.29□□□□□ -1.08
ATM-229ENST00000639953 SLC7A3Q8WY07 619 aa8.29□□□□□ -1.08
ATM-229ENST00000639953 FAM46AQ96IP4 442 aaKnown RBP8.29□□□□□ -1.08
ATM-229ENST00000639953 RALGAPBQ86X10 1494 aa8.29□□□□□ -1.08
ATM-229ENST00000639953 COL16A1Q07092 1604 aaPredicted RBP8.29□□□□□ -1.08
ATM-229ENST00000639953 NHSL1Q5SYE7 1610 aa8.29□□□□□ -1.08
ATM-229ENST00000639953 FAM177BA6PVY3 158 aa8.28□□□□□ -1.08
ATM-229ENST00000639953 EREGO14944 169 aa8.28□□□□□ -1.08
ATM-229ENST00000639953 DHX15O43143 795 aaKnown RBP8.28□□□□□ -1.08
ATM-229ENST00000639953 NLRP12P59046 1061 aa8.28□□□□□ -1.08
ATM-229ENST00000639953 AAMPQ13685 434 aa8.28□□□□□ -1.08
ATM-229ENST00000639953 TTC16Q8NEE8 873 aa8.28□□□□□ -1.08
ATM-229ENST00000639953 CARD11Q9BXL7 1154 aa8.28□□□□□ -1.08
ATM-229ENST00000639953 CEP41Q9BYV8 373 aa8.28□□□□□ -1.08
ATM-229ENST00000639953 C1orf115Q9H7X2 142 aa8.28□□□□□ -1.08
ATM-229ENST00000639953 PCMTD2Q9NV79 361 aa8.28□□□□□ -1.08
ATM-229ENST00000639953 AHDC1Q5TGY3 1603 aaPredicted RBP8.28□□□□□ -1.08
ATM-229ENST00000639953 CENPJQ9HC77 1338 aaPredicted RBP8.28□□□□□ -1.08
ATM-229ENST00000639953 GPRASP1Q5JY77 1395 aa8.27□□□□□ -1.09
ATM-229ENST00000639953 USP47Q96K76 1375 aa8.27□□□□□ -1.09
ATM-229ENST00000639953 ST20-MTHFSA0A0A6YYL1 179 aa8.27□□□□□ -1.09
ATM-229ENST00000639953 HMX2A2RU54 273 aa8.27□□□□□ -1.09
ATM-229ENST00000639953 H3BRJ5 948 aa8.27□□□□□ -1.09
ATM-229ENST00000639953 CCER2I3L3R5 266 aa8.27□□□□□ -1.09
ATM-229ENST00000639953 CABP4P57796 275 aa8.27□□□□□ -1.09
ATM-229ENST00000639953 XPCQ01831 940 aaPredicted RBP8.27□□□□□ -1.09
ATM-229ENST00000639953 PHLDB3Q6NSJ2 640 aa8.27□□□□□ -1.09
ATM-229ENST00000639953 TRIM42Q8IWZ5 723 aa8.27□□□□□ -1.09
ATM-229ENST00000639953 UTP4Q969X6 686 aaKnown RBP8.27□□□□□ -1.09
ATM-229ENST00000639953 NXPE3Q969Y0 559 aa8.27□□□□□ -1.09
ATM-229ENST00000639953 ANO2Q9NQ90 1003 aa8.27□□□□□ -1.09
ATM-229ENST00000639953 PRR36Q9H6K5 1346 aa8.27□□□□□ -1.09
ATM-229ENST00000639953 TULP4Q9NRJ4 1543 aa8.26□□□□□ -1.09
ATM-229ENST00000639953 SOX1O00570 391 aaPredicted RBP8.26□□□□□ -1.09
ATM-229ENST00000639953 TGFB1P01137 390 aa8.26□□□□□ -1.09
ATM-229ENST00000639953 PMFBP1Q8TBY8 1022 aa8.26□□□□□ -1.09
ATM-229ENST00000639953 OSMRQ99650 979 aa8.26□□□□□ -1.09
ATM-229ENST00000639953 CDK19Q9BWU1 502 aa8.26□□□□□ -1.09
ATM-229ENST00000639953 OSGEPQ9NPF4 335 aa8.26□□□□□ -1.09
ATM-229ENST00000639953 FOXD3Q9UJU5 478 aaPredicted RBP8.26□□□□□ -1.09
ATM-229ENST00000639953 SOX13Q9UN79 622 aa8.26□□□□□ -1.09
ATM-229ENST00000639953 ANP32CO43423 234 aa8.25□□□□□ -1.09
ATM-229ENST00000639953 TNFRSF21O75509 655 aa8.25□□□□□ -1.09
ATM-229ENST00000639953 ALKBH2Q6NS38 261 aa8.25□□□□□ -1.09
ATM-229ENST00000639953 TMEM102Q8N9M5 508 aaPredicted RBP8.25□□□□□ -1.09
ATM-229ENST00000639953 PMEPA1Q969W9 287 aa8.25□□□□□ -1.09
ATM-229ENST00000639953 ZKSCAN3Q9BRR0 538 aa8.25□□□□□ -1.09
ATM-229ENST00000639953 C7orf69Q9H7B7 122 aa8.25□□□□□ -1.09
ATM-229ENST00000639953 KIF1AQ12756 1690 aa8.24□□□□□ -1.09
ATM-229ENST00000639953 NPR3P17342 541 aa8.24□□□□□ -1.09
ATM-229ENST00000639953 CD97P48960 835 aa8.24□□□□□ -1.09
ATM-229ENST00000639953 CNGB1Q14028 1251 aaPredicted RBP8.24□□□□□ -1.09
ATM-229ENST00000639953 ZDHHC13Q8IUH4 622 aa8.24□□□□□ -1.09
ATM-229ENST00000639953 MYRFLQ96LU7 910 aa8.24□□□□□ -1.09
ATM-229ENST00000639953 CCDC87Q9NVE4 849 aa8.24□□□□□ -1.09
ATM-229ENST00000639953 ATP7BP35670 1465 aa8.24□□□□□ -1.09
ATM-229ENST00000639953 TOPAZ1Q8N9V7 1692 aa8.24□□□□□ -1.09
ATM-229ENST00000639953 EIF3AQ14152 1382 aaKnown RBP8.23□□□□□ -1.09
ATM-229ENST00000639953 ITSN1Q15811 1721 aa8.23□□□□□ -1.09
ATM-229ENST00000639953 MED1Q15648 1581 aaPredicted RBP8.23□□□□□ -1.09
ATM-229ENST00000639953 ANKARQ7Z5J8 1434 aa8.23□□□□□ -1.09
ATM-229ENST00000639953 SART1O43290 800 aaKnown RBP8.23□□□□□ -1.09
ATM-229ENST00000639953 FZD6O60353 706 aa8.23□□□□□ -1.09
ATM-229ENST00000639953 PHACTR2O75167 634 aa8.23□□□□□ -1.09
ATM-229ENST00000639953 BMP3P12645 472 aa8.23□□□□□ -1.09
ATM-229ENST00000639953 PREPP48147 710 aa8.23□□□□□ -1.09
ATM-229ENST00000639953 NFIAQ12857 509 aa8.23□□□□□ -1.09
ATM-229ENST00000639953 VN1R5Q7Z5H4 357 aa8.23□□□□□ -1.09
ATM-229ENST00000639953 FAM20CQ8IXL6 584 aa8.23□□□□□ -1.09
ATM-229ENST00000639953 WNT8BQ93098 351 aa8.23□□□□□ -1.09
ATM-229ENST00000639953 TESK2Q96S53 571 aa8.23□□□□□ -1.09
ATM-229ENST00000639953 POLR3GLQ9BT43 218 aa8.23□□□□□ -1.09
ATM-229ENST00000639953 RUSC1Q9BVN2 902 aa8.23□□□□□ -1.09
ATM-229ENST00000639953 PRKRIP1Q9H875 184 aaPredicted RBP8.23□□□□□ -1.09
ATM-229ENST00000639953 LATS2Q9NRM7 1088 aa8.23□□□□□ -1.09
ATM-229ENST00000639953 PXDNQ92626 1479 aa8.23□□□□□ -1.09
ATM-229ENST00000639953 SHPRHQ149N8 1683 aa8.23□□□□□ -1.09
ATM-229ENST00000639953 GSC2O15499 205 aa8.22□□□□□ -1.09
ATM-229ENST00000639953 FKBP4Q02790 459 aaKnown RBP eCLIP8.22□□□□□ -1.09
ATM-229ENST00000639953 UVSSAQ2YD98 709 aa8.22□□□□□ -1.09
ATM-229ENST00000639953 RNF43Q68DV7 783 aa8.22□□□□□ -1.09
ATM-229ENST00000639953 KRT28Q7Z3Y7 464 aa8.22□□□□□ -1.09
ATM-229ENST00000639953 CLEC10AQ8IUN9 316 aa8.22□□□□□ -1.09
ATM-229ENST00000639953 BSNDQ8WZ55 320 aa8.22□□□□□ -1.09
ATM-229ENST00000639953 KCNF1Q9H3M0 494 aa8.22□□□□□ -1.09
ATM-229ENST00000639953 NPHP3Q7Z494 1330 aa8.22□□□□□ -1.09
ATM-229ENST00000639953 PNPLA6Q8IY17 1366 aa8.22□□□□□ -1.09
ATM-229ENST00000639953 JCADQ9P266 1359 aa8.22□□□□□ -1.09
ATM-229ENST00000639953 DISP3Q9P2K9 1392 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms