RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 MPNDQ8N594 471 aa17.55■□□□□ 0.4
TRIM3-215ENST00000639856 CRNKL1Q9BZJ0 848 aaKnown RBP17.55■□□□□ 0.4
TRIM3-215ENST00000639856 ANAPC4Q9UJX5 808 aa17.55■□□□□ 0.4
TRIM3-215ENST00000639856 LAMB1P07942 1786 aa17.55■□□□□ 0.4
TRIM3-215ENST00000639856 USP17L12C9JPN9 530 aa17.54■□□□□ 0.4
TRIM3-215ENST00000639856 USP17L21D6R901 530 aa17.54■□□□□ 0.4
TRIM3-215ENST00000639856 CHRNA5P30532 468 aa17.54■□□□□ 0.4
TRIM3-215ENST00000639856 OTUD7BQ6GQQ9 843 aa17.54■□□□□ 0.4
TRIM3-215ENST00000639856 CCAR1Q8IX12 1150 aaKnown RBP17.54■□□□□ 0.4
TRIM3-215ENST00000639856 RTEL1Q9NZ71 1219 aa17.54■□□□□ 0.4
TRIM3-215ENST00000639856 SLX4Q8IY92 1834 aa17.54■□□□□ 0.4
TRIM3-215ENST00000639856 IFIT3O14879 490 aaKnown RBP17.54■□□□□ 0.4
TRIM3-215ENST00000639856 CDKL5O76039 1030 aa17.54■□□□□ 0.4
TRIM3-215ENST00000639856 LIFRP42702 1097 aa17.54■□□□□ 0.4
TRIM3-215ENST00000639856 MFSD14BQ5SR56 506 aa17.54■□□□□ 0.4
TRIM3-215ENST00000639856 DPP8Q6V1X1 898 aaPredicted RBP17.54■□□□□ 0.4
TRIM3-215ENST00000639856 BRAPQ7Z569 592 aa17.54■□□□□ 0.4
TRIM3-215ENST00000639856 MYL10Q9BUA6 226 aa17.54■□□□□ 0.4
TRIM3-215ENST00000639856 CYP2D6P10635 497 aa17.53■□□□□ 0.4
TRIM3-215ENST00000639856 CPLX2Q6PUV4 134 aaKnown RBP17.53■□□□□ 0.4
TRIM3-215ENST00000639856 SASS6Q6UVJ0 657 aa17.53■□□□□ 0.4
TRIM3-215ENST00000639856 SH3RF3Q8TEJ3 882 aaPredicted RBP17.53■□□□□ 0.4
TRIM3-215ENST00000639856 RNF41Q9H4P4 317 aaPredicted RBP17.53■□□□□ 0.4
TRIM3-215ENST00000639856 ZBTB43O43298 467 aa17.53■□□□□ 0.4
TRIM3-215ENST00000639856 PRDM1O75626 825 aa17.53■□□□□ 0.4
TRIM3-215ENST00000639856 BAG6P46379 1132 aa17.53■□□□□ 0.4
TRIM3-215ENST00000639856 ME1P48163 572 aa17.53■□□□□ 0.4
TRIM3-215ENST00000639856 SF3B2Q13435 895 aaKnown RBP17.53■□□□□ 0.4
TRIM3-215ENST00000639856 SLC4A8Q2Y0W8 1093 aa17.53■□□□□ 0.4
TRIM3-215ENST00000639856 ANO6Q4KMQ2 910 aa17.53■□□□□ 0.4
TRIM3-215ENST00000639856 CCDC73Q6ZRK6 1079 aa17.53■□□□□ 0.4
TRIM3-215ENST00000639856 MICU3Q86XE3 530 aa17.53■□□□□ 0.4
TRIM3-215ENST00000639856 CCDC144CPQ8IYA2 1237 aa17.53■□□□□ 0.4
TRIM3-215ENST00000639856 H0YIN7 160 aa17.52■□□□□ 0.4
TRIM3-215ENST00000639856 CTAGE5O15320 804 aa17.52■□□□□ 0.4
TRIM3-215ENST00000639856 AP5Z1O43299 807 aa17.52■□□□□ 0.4
TRIM3-215ENST00000639856 CDC27P30260 824 aa17.52■□□□□ 0.4
TRIM3-215ENST00000639856 TMED8Q6PL24 325 aaPredicted RBP17.52■□□□□ 0.4
TRIM3-215ENST00000639856 NFXL1Q6ZNB6 911 aa17.52■□□□□ 0.4
TRIM3-215ENST00000639856 NAP1L5Q96NT1 182 aaPredicted RBP17.52■□□□□ 0.4
TRIM3-215ENST00000639856 GOLPH3LQ9H4A5 285 aa17.52■□□□□ 0.4
TRIM3-215ENST00000639856 GJB4Q9NTQ9 266 aa17.52■□□□□ 0.4
TRIM3-215ENST00000639856 ZNF219Q9P2Y4 722 aaPredicted RBP17.52■□□□□ 0.4
TRIM3-215ENST00000639856 ECM29Q5VYK3 1845 aa17.52■□□□□ 0.39
TRIM3-215ENST00000639856 MROH7-TTC4A0A0A0MT08 1334 aa17.52■□□□□ 0.39
TRIM3-215ENST00000639856 CDK5RAP2Q96SN8 1893 aa17.52■□□□□ 0.39
TRIM3-215ENST00000639856 POLR3DP05423 398 aaPredicted RBP17.51■□□□□ 0.39
TRIM3-215ENST00000639856 GTF2IP78347 998 aa17.51■□□□□ 0.39
TRIM3-215ENST00000639856 GSTO1P78417 241 aa17.51■□□□□ 0.39
TRIM3-215ENST00000639856 PLCB2Q00722 1185 aa17.51■□□□□ 0.39
TRIM3-215ENST00000639856 SNW1Q13573 536 aaKnown RBP17.51■□□□□ 0.39
TRIM3-215ENST00000639856 DOK7Q18PE1 504 aa17.51■□□□□ 0.39
TRIM3-215ENST00000639856 MYSM1Q5VVJ2 828 aa17.51■□□□□ 0.39
TRIM3-215ENST00000639856 LINC00301Q8NCQ3 95 aa17.51■□□□□ 0.39
TRIM3-215ENST00000639856 ENGASEQ8NFI3 743 aa17.51■□□□□ 0.39
TRIM3-215ENST00000639856 RTFDC1Q9BY42 306 aaPredicted RBP17.51■□□□□ 0.39
TRIM3-215ENST00000639856 ATP8A2Q9NTI2 1148 aa17.51■□□□□ 0.39
TRIM3-215ENST00000639856 POLR3EQ9NVU0 708 aa17.51■□□□□ 0.39
TRIM3-215ENST00000639856 OFD1O75665 1012 aa17.51■□□□□ 0.39
TRIM3-215ENST00000639856 YEATS4O95619 227 aa17.51■□□□□ 0.39
TRIM3-215ENST00000639856 KIF23Q02241 960 aaPredicted RBP17.51■□□□□ 0.39
TRIM3-215ENST00000639856 FAM160A1Q05DH4 1040 aa17.51■□□□□ 0.39
TRIM3-215ENST00000639856 ADALQ6DHV7 355 aa17.51■□□□□ 0.39
TRIM3-215ENST00000639856 ZC3H12CQ9C0D7 883 aaKnown RBP17.51■□□□□ 0.39
TRIM3-215ENST00000639856 COA1Q9GZY4 146 aa17.51■□□□□ 0.39
TRIM3-215ENST00000639856 PCDHA7Q9UN72 937 aa17.51■□□□□ 0.39
TRIM3-215ENST00000639856 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.51■□□□□ 0.39
TRIM3-215ENST00000639856 USP17L8P0C7I0 530 aa17.5■□□□□ 0.39
TRIM3-215ENST00000639856 NTRK3Q16288 839 aa17.5■□□□□ 0.39
TRIM3-215ENST00000639856 STYK1Q6J9G0 422 aa17.5■□□□□ 0.39
TRIM3-215ENST00000639856 LUZP1Q86V48 1076 aa17.5■□□□□ 0.39
TRIM3-215ENST00000639856 FBXW7Q969H0 707 aa17.5■□□□□ 0.39
TRIM3-215ENST00000639856 ALG1Q9BT22 464 aa17.5■□□□□ 0.39
TRIM3-215ENST00000639856 CBX8Q9HC52 389 aa17.5■□□□□ 0.39
TRIM3-215ENST00000639856 MCM9Q9NXL9 1143 aa17.5■□□□□ 0.39
TRIM3-215ENST00000639856 FAM205AQ6ZU69 1335 aa17.5■□□□□ 0.39
TRIM3-215ENST00000639856 GOLGA8AA7E2F4 631 aa17.5■□□□□ 0.39
TRIM3-215ENST00000639856 KINO60870 393 aaKnown RBP17.5■□□□□ 0.39
TRIM3-215ENST00000639856 CAVIN2O95810 425 aa17.5■□□□□ 0.39
TRIM3-215ENST00000639856 FSIP1Q8NA03 581 aa17.5■□□□□ 0.39
TRIM3-215ENST00000639856 KCNG4Q8TDN1 519 aa17.5■□□□□ 0.39
TRIM3-215ENST00000639856 ESR2Q92731 530 aa17.5■□□□□ 0.39
TRIM3-215ENST00000639856 FAM217BQ9NTX9 383 aaPredicted RBP17.5■□□□□ 0.39
TRIM3-215ENST00000639856 MKRN1Q9UHC7 482 aaKnown RBP17.5■□□□□ 0.39
TRIM3-215ENST00000639856 SLC12A7Q9Y666 1083 aa17.5■□□□□ 0.39
TRIM3-215ENST00000639856 CLIC4Q9Y696 253 aa17.5■□□□□ 0.39
TRIM3-215ENST00000639856 NAV1Q8NEY1 1877 aa17.5■□□□□ 0.39
TRIM3-215ENST00000639856 A0A1W2PQ27 194 aa17.49■□□□□ 0.39
TRIM3-215ENST00000639856 A0A1W2PQ64 194 aa17.49■□□□□ 0.39
TRIM3-215ENST00000639856 A0A1W2PQD8 194 aa17.49■□□□□ 0.39
TRIM3-215ENST00000639856 CCDC69A6NI79 296 aa17.49■□□□□ 0.39
TRIM3-215ENST00000639856 KIF28PB7ZC32 967 aa17.49■□□□□ 0.39
TRIM3-215ENST00000639856 BTDP43251 543 aa17.49■□□□□ 0.39
TRIM3-215ENST00000639856 USP5P45974 858 aa17.49■□□□□ 0.39
TRIM3-215ENST00000639856 WTAPQ15007 396 aa17.49■□□□□ 0.39
TRIM3-215ENST00000639856 STK38Q15208 465 aa17.49■□□□□ 0.39
TRIM3-215ENST00000639856 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.49■□□□□ 0.39
TRIM3-215ENST00000639856 MTA3Q9BTC8 594 aa17.49■□□□□ 0.39
TRIM3-215ENST00000639856 MXD3Q9BW11 206 aa17.49■□□□□ 0.39
TRIM3-215ENST00000639856 TMX4Q9H1E5 349 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms