RNA–Protein interactions for RNA: ENST00000639276.1

NECAP1-217, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,646 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-217ENST00000639276 TDRD7Q8NHU6 1098 aaKnown RBP10.38□□□□□ -0.75
NECAP1-217ENST00000639276 ZSCAN10Q96SZ4 725 aaPredicted RBP10.38□□□□□ -0.75
NECAP1-217ENST00000639276 ECM29Q5VYK3 1845 aa10.38□□□□□ -0.75
NECAP1-217ENST00000639276 WDHD1O75717 1129 aaPredicted RBP10.38□□□□□ -0.75
NECAP1-217ENST00000639276 FMNL1O95466 1100 aaPredicted RBP10.38□□□□□ -0.75
NECAP1-217ENST00000639276 IFNAR1P17181 557 aa10.38□□□□□ -0.75
NECAP1-217ENST00000639276 NDUFA8P51970 172 aa10.38□□□□□ -0.75
NECAP1-217ENST00000639276 ST5P78524 1137 aa10.38□□□□□ -0.75
NECAP1-217ENST00000639276 SF3A1Q15459 793 aaKnown RBP10.38□□□□□ -0.75
NECAP1-217ENST00000639276 SLC27A3Q5K4L6 730 aa10.38□□□□□ -0.75
NECAP1-217ENST00000639276 RBM43Q6ZSC3 357 aaKnown RBP10.38□□□□□ -0.75
NECAP1-217ENST00000639276 SH3RF3Q8TEJ3 882 aaPredicted RBP10.38□□□□□ -0.75
NECAP1-217ENST00000639276 FBXW7Q969H0 707 aa10.38□□□□□ -0.75
NECAP1-217ENST00000639276 CRNKL1Q9BZJ0 848 aaKnown RBP10.38□□□□□ -0.75
NECAP1-217ENST00000639276 POLLQ9UGP5 575 aa10.38□□□□□ -0.75
NECAP1-217ENST00000639276 LEMD3Q9Y2U8 911 aa10.38□□□□□ -0.75
NECAP1-217ENST00000639276 BAZ2BQ9UIF8 2168 aaKnown RBP10.38□□□□□ -0.75
NECAP1-217ENST00000639276 BTBD18B2RXH4 712 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 SPTLC2O15270 562 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 LDHBP07195 334 aaKnown RBP10.37□□□□□ -0.75
NECAP1-217ENST00000639276 CLCN1P35523 988 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 GNL2Q13823 731 aaKnown RBP10.37□□□□□ -0.75
NECAP1-217ENST00000639276 ANO1Q5XXA6 986 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 ATL3Q6DD88 541 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 BRAPQ7Z569 592 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 CRACR2BQ8N4Y2 399 aaPredicted RBP10.37□□□□□ -0.75
NECAP1-217ENST00000639276 SHISA4Q96DD7 197 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 DYNLL2Q96FJ2 89 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 ZNF830Q96NB3 372 aaPredicted RBP10.37□□□□□ -0.75
NECAP1-217ENST00000639276 DNAJC25Q9H1X3 360 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 MCM9Q9NXL9 1143 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 PDS5AQ29RF7 1337 aaKnown RBP10.37□□□□□ -0.75
NECAP1-217ENST00000639276 PLEKHA8P1O95397 391 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 UVSSAQ2YD98 709 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 ADALQ6DHV7 355 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 ZSCAN30Q86W11 494 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.37□□□□□ -0.75
NECAP1-217ENST00000639276 CBX8Q9HC52 389 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 POLR3EQ9NVU0 708 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 FAM160A1Q05DH4 1040 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 NR5A1Q13285 461 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 IFIT1BQ5T764 474 aaKnown RBP10.37□□□□□ -0.75
NECAP1-217ENST00000639276 CCDC73Q6ZRK6 1079 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 OXER1Q8TDS5 423 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 CD209Q9NNX6 404 aa10.37□□□□□ -0.75
NECAP1-217ENST00000639276 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.37□□□□□ -0.75
NECAP1-217ENST00000639276 DUOX1Q9NRD9 1551 aa10.36□□□□□ -0.75
NECAP1-217ENST00000639276 FGRP09769 529 aa10.36□□□□□ -0.75
NECAP1-217ENST00000639276 TRIM29Q14134 588 aa10.36□□□□□ -0.75
NECAP1-217ENST00000639276 AXDND1Q5T1B0 1012 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-217ENST00000639276 SASS6Q6UVJ0 657 aa10.36□□□□□ -0.75
NECAP1-217ENST00000639276 ZNF804AQ7Z570 1209 aa10.36□□□□□ -0.75
NECAP1-217ENST00000639276 COL23A1Q86Y22 540 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-217ENST00000639276 FMR1NBQ8N0W7 255 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-217ENST00000639276 TMTC2Q8N394 836 aa10.36□□□□□ -0.75
NECAP1-217ENST00000639276 MRPS27Q92552 414 aaKnown RBP10.36□□□□□ -0.75
NECAP1-217ENST00000639276 RBM17Q96I25 401 aaKnown RBP10.36□□□□□ -0.75
NECAP1-217ENST00000639276 CLIC6Q96NY7 704 aa10.36□□□□□ -0.75
NECAP1-217ENST00000639276 RIMBP2O15034 1052 aa10.36□□□□□ -0.75
NECAP1-217ENST00000639276 PTMAP06454 111 aaKnown RBP10.36□□□□□ -0.75
NECAP1-217ENST00000639276 U2AF2P26368 475 aaKnown RBP eCLIP10.36□□□□□ -0.753e-6■■■■□ 23.7
NECAP1-217ENST00000639276 C11orf57Q6ZUT1 292 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-217ENST00000639276 WDR66Q8TBY9 1149 aa10.36□□□□□ -0.75
NECAP1-217ENST00000639276 FAM200AQ8TCP9 573 aa10.36□□□□□ -0.75
NECAP1-217ENST00000639276 TGFBRAP1Q8WUH2 860 aa10.36□□□□□ -0.75
NECAP1-217ENST00000639276 PIBF1Q8WXW3 757 aa10.36□□□□□ -0.75
NECAP1-217ENST00000639276 MAP3K14Q99558 947 aa10.36□□□□□ -0.75
NECAP1-217ENST00000639276 ATP8A2Q9NTI2 1148 aa10.36□□□□□ -0.75
NECAP1-217ENST00000639276 SAP30BPQ9UHR5 308 aaKnown RBP10.36□□□□□ -0.75
NECAP1-217ENST00000639276 GGA1Q9UJY5 639 aa10.36□□□□□ -0.75
NECAP1-217ENST00000639276 CCDC88AQ3V6T2 1871 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 MROH7-TTC4A0A0A0MT08 1334 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 C6orf229H3BNL8 230 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 KINO60870 393 aaKnown RBP10.35□□□□□ -0.75
NECAP1-217ENST00000639276 YEATS4O95619 227 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 APBA3O96018 575 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 VEGFAP15692 232 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-217ENST00000639276 USP5P45974 858 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 TOB1P50616 345 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-217ENST00000639276 TROAPQ12815 778 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 SLC39A14Q15043 492 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 PTPAQ15257 358 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 SPECC1Q5M775 1068 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 SPTY2D1Q68D10 685 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-217ENST00000639276 IQCA1Q86XH1 822 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 DIS3L2Q8IYB7 885 aaKnown RBP10.35□□□□□ -0.75
NECAP1-217ENST00000639276 SLC44A5Q8NCS7 719 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 TBC1D16Q8TBP0 767 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 MKRN1Q9UHC7 482 aaKnown RBP10.35□□□□□ -0.75
NECAP1-217ENST00000639276 NOL7Q9UMY1 257 aaKnown RBP10.35□□□□□ -0.75
NECAP1-217ENST00000639276 V9GY48 417 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-217ENST00000639276 FAM205CA6NFA0 338 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 MMP1P03956 469 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 ATP2B1P20020 1258 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 ZNF165P49910 485 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 PLCD1P51178 756 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 FUT2Q10981 343 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 MSL1Q68DK7 614 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 MAPKAPK5Q8IW41 473 aa10.35□□□□□ -0.75
NECAP1-217ENST00000639276 TRIM22Q8IYM9 498 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms