RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 SLC45A1Q9Y2W3 748 aa20.71■□□□□ 0.91
SMN2-216ENST00000638794 FOCADQ5VW36 1801 aa20.71■□□□□ 0.91
SMN2-216ENST00000638794 LOC285556D6RIA3 1793 aa20.7■□□□□ 0.9
SMN2-216ENST00000638794 FCGRTP55899 365 aa20.7■□□□□ 0.9
SMN2-216ENST00000638794 MTFR1Q15390 333 aa20.7■□□□□ 0.9
SMN2-216ENST00000638794 CCDC158Q5M9N0 1113 aa20.7■□□□□ 0.9
SMN2-216ENST00000638794 NAA16Q6N069 864 aaPredicted RBP20.7■□□□□ 0.9
SMN2-216ENST00000638794 AATFQ9NY61 560 aaKnown RBP eCLIP20.7■□□□□ 0.9
SMN2-216ENST00000638794 ZBTB7BO15156 539 aaPredicted RBP20.69■□□□□ 0.9
SMN2-216ENST00000638794 CYP2E1P05181 493 aaPredicted RBP20.69■□□□□ 0.9
SMN2-216ENST00000638794 GRK4P32298 578 aa20.69■□□□□ 0.9
SMN2-216ENST00000638794 PRKCZQ05513 592 aa20.69■□□□□ 0.9
SMN2-216ENST00000638794 NOL10Q9BSC4 688 aaKnown RBP20.69■□□□□ 0.9
SMN2-216ENST00000638794 RRP1BQ14684 758 aaKnown RBP20.68■□□□□ 0.9
SMN2-216ENST00000638794 TREML2Q5T2D2 321 aa20.68■□□□□ 0.9
SMN2-216ENST00000638794 ADGRA1Q86SQ6 560 aa20.68■□□□□ 0.9
SMN2-216ENST00000638794 SMCR8Q8TEV9 937 aaPredicted RBP20.68■□□□□ 0.9
SMN2-216ENST00000638794 DBNLQ9UJU6 430 aaKnown RBP20.68■□□□□ 0.9
SMN2-216ENST00000638794 AGTPBP1Q9UPW5 1226 aa20.68■□□□□ 0.9
SMN2-216ENST00000638794 NOP58Q9Y2X3 529 aaKnown RBP20.68■□□□□ 0.9
SMN2-216ENST00000638794 BAG3O95817 575 aa20.67■□□□□ 0.9
SMN2-216ENST00000638794 GCC1Q96CN9 775 aa20.67■□□□□ 0.9
SMN2-216ENST00000638794 ZNF512BQ96KM6 892 aaPredicted RBP20.67■□□□□ 0.9
SMN2-216ENST00000638794 TLR7Q9NYK1 1049 aaKnown RBP20.67■□□□□ 0.9
SMN2-216ENST00000638794 HERC5Q9UII4 1024 aaKnown RBP20.67■□□□□ 0.9
SMN2-216ENST00000638794 GABRQQ9UN88 632 aa20.67■□□□□ 0.9
SMN2-216ENST00000638794 CAP2P40123 477 aa20.66■□□□□ 0.9
SMN2-216ENST00000638794 ZAP70P43403 619 aa20.66■□□□□ 0.9
SMN2-216ENST00000638794 PPP4CP60510 307 aa20.66■□□□□ 0.9
SMN2-216ENST00000638794 SPP2Q13103 211 aa20.66■□□□□ 0.9
SMN2-216ENST00000638794 ZNF280CQ8ND82 737 aa20.66■□□□□ 0.9
SMN2-216ENST00000638794 SHISA4Q96DD7 197 aa20.66■□□□□ 0.9
SMN2-216ENST00000638794 DOCK3Q8IZD9 2030 aa20.66■□□□□ 0.9
SMN2-216ENST00000638794 CEP290O15078 2479 aa20.66■□□□□ 0.9
SMN2-216ENST00000638794 FLT1P17948 1338 aa20.65■□□□□ 0.9
SMN2-216ENST00000638794 PLCG2P16885 1265 aa20.65■□□□□ 0.9
SMN2-216ENST00000638794 DIEXFQ68CQ4 756 aaKnown RBP20.65■□□□□ 0.9
SMN2-216ENST00000638794 PROCA1Q8NCQ7 364 aaPredicted RBP20.65■□□□□ 0.9
SMN2-216ENST00000638794 TGFBRAP1Q8WUH2 860 aa20.65■□□□□ 0.9
SMN2-216ENST00000638794 EAF2Q96CJ1 260 aaPredicted RBP20.65■□□□□ 0.9
SMN2-216ENST00000638794 CCDC8Q9H0W5 538 aaPredicted RBP20.65■□□□□ 0.9
SMN2-216ENST00000638794 DHX36Q9H2U1 1008 aaKnown RBP20.65■□□□□ 0.9
SMN2-216ENST00000638794 PIH1D3Q9NQM4 214 aaKnown RBP20.65■□□□□ 0.9
SMN2-216ENST00000638794 PI4KBQ9UBF8 816 aa20.65■□□□□ 0.9
SMN2-216ENST00000638794 CCL5P13501 91 aa20.64■□□□□ 0.89
SMN2-216ENST00000638794 HMGCS2P54868 508 aa20.64■□□□□ 0.89
SMN2-216ENST00000638794 CEP85Q6P2H3 762 aa20.64■□□□□ 0.89
SMN2-216ENST00000638794 MAPKAPK5Q8IW41 473 aa20.64■□□□□ 0.89
SMN2-216ENST00000638794 SLAIN1Q8ND83 568 aa20.64■□□□□ 0.89
SMN2-216ENST00000638794 TBC1D2Q9BYX2 928 aa20.64■□□□□ 0.89
SMN2-216ENST00000638794 BIN2Q9UBW5 565 aaPredicted RBP20.64■□□□□ 0.89
SMN2-216ENST00000638794 PNMA3Q9UL41 463 aa20.64■□□□□ 0.89
SMN2-216ENST00000638794 ZBED9Q6R2W3 1325 aa20.63■□□□□ 0.89
SMN2-216ENST00000638794 USP17L5A8MUK1 530 aa20.63■□□□□ 0.89
SMN2-216ENST00000638794 TNPO2O14787 897 aaKnown RBP20.63■□□□□ 0.89
SMN2-216ENST00000638794 ANKRD13CQ8N6S4 541 aa20.63■□□□□ 0.89
SMN2-216ENST00000638794 FLT3LGP49771 235 aa20.62■□□□□ 0.89
SMN2-216ENST00000638794 UBXN2AP68543 259 aa20.62■□□□□ 0.89
SMN2-216ENST00000638794 PANK1Q8TE04 598 aa20.62■□□□□ 0.89
SMN2-216ENST00000638794 RNF208Q9H0X6 261 aa20.62■□□□□ 0.89
SMN2-216ENST00000638794 DNAJC18Q9H819 358 aa20.62■□□□□ 0.89
SMN2-216ENST00000638794 MYH1P12882 1939 aa20.62■□□□□ 0.89
SMN2-216ENST00000638794 ADCY3O60266 1144 aa20.61■□□□□ 0.89
SMN2-216ENST00000638794 IGSF3O75054 1194 aa20.61■□□□□ 0.89
SMN2-216ENST00000638794 GJB1P08034 283 aa20.61■□□□□ 0.89
SMN2-216ENST00000638794 FAM110CQ1W6H9 321 aa20.61■□□□□ 0.89
SMN2-216ENST00000638794 HABP4Q5JVS0 413 aaKnown RBP20.61■□□□□ 0.89
SMN2-216ENST00000638794 AS3MTQ9HBK9 375 aa20.61■□□□□ 0.89
SMN2-216ENST00000638794 PALD1Q9ULE6 856 aa20.61■□□□□ 0.89
SMN2-216ENST00000638794 EXOC6BQ9Y2D4 811 aa20.61■□□□□ 0.89
SMN2-216ENST00000638794 NDUFB9Q9Y6M9 179 aa20.61■□□□□ 0.89
SMN2-216ENST00000638794 IDH1O75874 414 aaKnown RBP20.6■□□□□ 0.89
SMN2-216ENST00000638794 ELNP15502 786 aa20.6■□□□□ 0.89
SMN2-216ENST00000638794 CYP7A1P22680 504 aa20.6■□□□□ 0.89
SMN2-216ENST00000638794 GJA8P48165 433 aa20.6■□□□□ 0.89
SMN2-216ENST00000638794 DYNLL1P63167 89 aaKnown RBP20.6■□□□□ 0.89
SMN2-216ENST00000638794 JAG1P78504 1218 aa20.6■□□□□ 0.89
SMN2-216ENST00000638794 PABPC4Q13310 644 aaKnown RBP eCLIP20.6■□□□□ 0.89
SMN2-216ENST00000638794 SH3D19Q5HYK7 790 aa20.6■□□□□ 0.89
SMN2-216ENST00000638794 METTL16Q86W50 562 aaKnown RBP20.6■□□□□ 0.89
SMN2-216ENST00000638794 CRACR2BQ8N4Y2 399 aaPredicted RBP20.6■□□□□ 0.89
SMN2-216ENST00000638794 NKX2-3Q8TAU0 364 aa20.6■□□□□ 0.89
SMN2-216ENST00000638794 ASNSP08243 561 aa20.59■□□□□ 0.89
SMN2-216ENST00000638794 IRF5Q13568 498 aa20.59■□□□□ 0.89
SMN2-216ENST00000638794 MTMR2Q13614 643 aa20.59■□□□□ 0.89
SMN2-216ENST00000638794 SHROOM1Q2M3G4 852 aaPredicted RBP20.59■□□□□ 0.89
SMN2-216ENST00000638794 FOXP4Q8IVH2 680 aaPredicted RBP20.59■□□□□ 0.89
SMN2-216ENST00000638794 MIGA1Q8NAN2 632 aa20.59■□□□□ 0.89
SMN2-216ENST00000638794 PXYLP1Q8TE99 480 aa20.59■□□□□ 0.89
SMN2-216ENST00000638794 COA7Q96BR5 231 aa20.59■□□□□ 0.89
SMN2-216ENST00000638794 WDR18Q9BV38 432 aa20.59■□□□□ 0.89
SMN2-216ENST00000638794 TRIM34Q9BYJ4 488 aa20.59■□□□□ 0.89
SMN2-216ENST00000638794 UNC93B1Q9H1C4 597 aa20.59■□□□□ 0.89
SMN2-216ENST00000638794 ASCC2Q9H1I8 757 aaPredicted RBP20.59■□□□□ 0.89
SMN2-216ENST00000638794 PCDH10Q9P2E7 1040 aa20.59■□□□□ 0.89
SMN2-216ENST00000638794 SAP30BPQ9UHR5 308 aaKnown RBP20.59■□□□□ 0.89
SMN2-216ENST00000638794 GDF11O95390 407 aa20.58■□□□□ 0.89
SMN2-216ENST00000638794 INHAP05111 366 aa20.58■□□□□ 0.89
SMN2-216ENST00000638794 GCLCP48506 637 aaPredicted RBP20.58■□□□□ 0.89
SMN2-216ENST00000638794 HLA-DOAP06340 250 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms