RNA–Protein interactions for RNA: ENST00000638641.1

PIGT-223, Transcript of phosphatidylinositol glycan anchor biosynthesis class T, human

Gene PIGT, Length 2,164 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIGT-223	ENST00000638641	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	C16orf45	Q96MC5	204 aa	Predicted RBP	11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	IWS1	Q96ST2	819 aa		11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	SNX14	Q9Y5W7	946 aa		11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	COL18A1	P39060	1754 aa		11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	CCDC159	P0C7I6	412 aa		11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	MYCLP1	P12525	358 aa	Predicted RBP	11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	RPL17	P18621	184 aa	Known RBP	11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	RFX1	P22670	979 aa		11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	RXRB	P28702	533 aa		11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	CDC25B	P30305	580 aa		11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	TYRO3	Q06418	890 aa		11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	TMED1	Q13445	227 aa		11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	NFXL1	Q6ZNB6	911 aa		11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	IP6K1	Q92551	441 aa		11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	YIPF2	Q9BWQ6	316 aa		11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	VEZT	Q9HBM0	779 aa		11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	MTMR6	Q9Y217	621 aa		11.3	□□□□□ -0.6
PIGT-223	ENST00000638641	CRB1	P82279	1406 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	SGSM2	O43147	1006 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	NEMF	O60524	1076 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	CAVIN2	O95810	425 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	SLFN14	P0C7P3	912 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	FBLN1	P23142	703 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	HOXC13	P31276	330 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	AMPH	P49418	695 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	ATP8B2	P98198	1209 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	DNM1	Q05193	864 aa	Known RBP	11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	PREPL	Q4J6C6	727 aa	Predicted RBP	11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	RUFY3	Q7L099	469 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	PLA2G4D	Q86XP0	818 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	ARL10	Q8N8L6	244 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	ZFPM2	Q8WW38	1151 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	NELL1	Q92832	810 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	TMEM87B	Q96K49	555 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	BIN2	Q9UBW5	565 aa	Predicted RBP	11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	POLG2	Q9UHN1	485 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	CAMTA1	Q9Y6Y1	1673 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	LTN1	O94822	1766 aa		11.29	□□□□□ -0.6
PIGT-223	ENST00000638641	COL5A2	P05997	1499 aa	Predicted RBP	11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	C7	P10643	843 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	GSC	P56915	257 aa	Predicted RBP	11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	KRT85	P78386	507 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	SLFNL1	Q499Z3	407 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	ZSCAN25	Q6NSZ9	544 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	POTEA	Q6S8J7	498 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	CCDC186	Q7Z3E2	898 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	MAP3K19	Q56UN5	1328 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	MYBL2	P10244	700 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	GJB2	P29033	226 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	ZNF75D	P51815	510 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	TAF11	Q15544	211 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	TERF2	Q15554	542 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	CCDC178	Q5BJE1	867 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	RNF20	Q5VTR2	975 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	SLC4A10	Q6U841	1118 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	APPL2	Q8NEU8	664 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	TBC1D20	Q96BZ9	403 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	TRIM11	Q96F44	468 aa		11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	GJD4	Q96KN9	370 aa	Predicted RBP	11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	DDX19A	Q9NUU7	478 aa	Known RBP	11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	GNE	Q9Y223	722 aa	Known RBP	11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	MRPL42	Q9Y6G3	142 aa	Known RBP	11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	SOS1	Q07889	1333 aa	Predicted RBP	11.28	□□□□□ -0.6
PIGT-223	ENST00000638641	FLT4	P35916	1363 aa		11.27	□□□□□ -0.6
PIGT-223	ENST00000638641	LRRC37A3	O60309	1634 aa		11.27	□□□□□ -0.6
PIGT-223	ENST00000638641	SESN3	P58005	492 aa		11.27	□□□□□ -0.6
PIGT-223	ENST00000638641	VPS53	Q5VIR6	699 aa		11.27	□□□□□ -0.6
PIGT-223	ENST00000638641	CCBE1	Q6UXH8	406 aa	Predicted RBP	11.27	□□□□□ -0.6
PIGT-223	ENST00000638641	SAPCD2	Q86UD0	394 aa		11.27	□□□□□ -0.6
PIGT-223	ENST00000638641	NCAPG2	Q86XI2	1143 aa		11.27	□□□□□ -0.6
PIGT-223	ENST00000638641	MYOCD	Q8IZQ8	938 aa		11.27	□□□□□ -0.6
PIGT-223	ENST00000638641	SLC7A5P2	Q9GIP4	190 aa		11.27	□□□□□ -0.6
PIGT-223	ENST00000638641	LSG1	Q9H089	658 aa	Known RBP	11.27	□□□□□ -0.6
PIGT-223	ENST00000638641	ZSWIM4	Q9H7M6	989 aa		11.27	□□□□□ -0.6
PIGT-223	ENST00000638641	VRTN	Q9H8Y1	702 aa		11.27	□□□□□ -0.6
PIGT-223	ENST00000638641	RGS20	O76081	388 aa		11.27	□□□□□ -0.61
PIGT-223	ENST00000638641	SRGN	P10124	158 aa		11.27	□□□□□ -0.61
PIGT-223	ENST00000638641	VAMP1	P23763	118 aa		11.27	□□□□□ -0.61
PIGT-223	ENST00000638641	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
PIGT-223	ENST00000638641	TRAF1	Q13077	416 aa		11.27	□□□□□ -0.61
PIGT-223	ENST00000638641	RBM43	Q6ZSC3	357 aa	Known RBP	11.27	□□□□□ -0.61
PIGT-223	ENST00000638641	MYLK4	Q86YV6	388 aa	Predicted RBP	11.27	□□□□□ -0.61
PIGT-223	ENST00000638641	CNTROB	Q8N137	903 aa		11.27	□□□□□ -0.61
PIGT-223	ENST00000638641	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.27	□□□□□ -0.61
PIGT-223	ENST00000638641	STRN4	Q9NRL3	753 aa		11.27	□□□□□ -0.61
PIGT-223	ENST00000638641	CALCOCO1	Q9P1Z2	691 aa		11.27	□□□□□ -0.61
PIGT-223	ENST00000638641	SPATA31A5	Q5VU36	1347 aa		11.26	□□□□□ -0.61
PIGT-223	ENST00000638641	SPATA31A7	Q8IWB4	1347 aa		11.26	□□□□□ -0.61
PIGT-223	ENST00000638641	WDR17	Q8IZU2	1322 aa		11.26	□□□□□ -0.61
PIGT-223	ENST00000638641	PDC	P20941	246 aa		11.26	□□□□□ -0.61
PIGT-223	ENST00000638641	HOXC9	P31274	260 aa		11.26	□□□□□ -0.61
PIGT-223	ENST00000638641	GNAL	P38405	381 aa		11.26	□□□□□ -0.61
PIGT-223	ENST00000638641	GPSM2	P81274	684 aa		11.26	□□□□□ -0.61
PIGT-223	ENST00000638641	TPD52L1	Q16890	204 aa	Predicted RBP	11.26	□□□□□ -0.61
PIGT-223	ENST00000638641	RC3H1	Q5TC82	1133 aa	Known RBP	11.26	□□□□□ -0.61
PIGT-223	ENST00000638641	CEP135	Q66GS9	1140 aa		11.26	□□□□□ -0.61
PIGT-223	ENST00000638641	STK31	Q9BXU1	1019 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms