RNA–Protein interactions for RNA: ENST00000637500.1

TCF4-287, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-287	ENST00000637500	NTF4	P34130	210 aa		2.7	□□□□□ -1.98
TCF4-287	ENST00000637500	DNM1	Q05193	864 aa	Known RBP	2.7	□□□□□ -1.98
TCF4-287	ENST00000637500	C8orf34	Q49A92	452 aa		2.7	□□□□□ -1.98
TCF4-287	ENST00000637500	ZC3H12A	Q5D1E8	599 aa	Known RBP	2.7	□□□□□ -1.98
TCF4-287	ENST00000637500	RALGPS1	Q5JS13	557 aa		2.7	□□□□□ -1.98
TCF4-287	ENST00000637500	C22orf34	Q6ZV56	151 aa		2.7	□□□□□ -1.98
TCF4-287	ENST00000637500	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	2.7	□□□□□ -1.98
TCF4-287	ENST00000637500	MKNK1	Q9BUB5	465 aa		2.7	□□□□□ -1.98
TCF4-287	ENST00000637500	MENT	Q9BUN1	341 aa		2.7	□□□□□ -1.98
TCF4-287	ENST00000637500	SGPP1	Q9BX95	441 aa		2.7	□□□□□ -1.98
TCF4-287	ENST00000637500	RNF32	Q9H0A6	362 aa		2.7	□□□□□ -1.98
TCF4-287	ENST00000637500	DNAJC25	Q9H1X3	360 aa		2.7	□□□□□ -1.98
TCF4-287	ENST00000637500	ZNF576	Q9H609	170 aa		2.7	□□□□□ -1.98
TCF4-287	ENST00000637500	KRT82	Q9NSB4	513 aa		2.7	□□□□□ -1.98
TCF4-287	ENST00000637500	FOXD3	Q9UJU5	478 aa	Predicted RBP	2.7	□□□□□ -1.98
TCF4-287	ENST00000637500	ZC3H12D	A2A288	527 aa	Known RBP	2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	SLC22A31	A6NKX4	558 aa		2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	GNAT3	A8MTJ3	354 aa		2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	PRR33	A8MZF0	331 aa		2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	PCSK2	P16519	638 aa		2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	PLP2	Q04941	152 aa		2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	FRMD5	Q7Z6J6	570 aa		2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	ZDHHC14	Q8IZN3	488 aa		2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	FNBP4	Q8N3X1	1017 aa	Predicted RBP	2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	RNF214	Q8ND24	703 aa		2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	SNX29	Q8TEQ0	813 aa		2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	FOXQ1	Q9C009	403 aa		2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	ADAM7	Q9H2U9	754 aa		2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	ZFYVE28	Q9HCC9	887 aa		2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	CNOT11	Q9UKZ1	510 aa	Known RBP	2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	MAPK8IP1	Q9UQF2	711 aa		2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	AMOTL2	Q9Y2J4	779 aa		2.69	□□□□□ -1.98
TCF4-287	ENST00000637500	RFXAP	O00287	272 aa		2.68	□□□□□ -1.98
TCF4-287	ENST00000637500	MATN3	O15232	486 aa		2.68	□□□□□ -1.98
TCF4-287	ENST00000637500	ESR1	P03372	595 aa		2.68	□□□□□ -1.98
TCF4-287	ENST00000637500	TRHR	P34981	398 aa	Predicted RBP	2.68	□□□□□ -1.98
TCF4-287	ENST00000637500	ERVK-24	P63145	666 aa		2.68	□□□□□ -1.98
TCF4-287	ENST00000637500	THAP5	Q7Z6K1	395 aa		2.68	□□□□□ -1.98
TCF4-287	ENST00000637500	LSR	Q86X29	649 aa	Predicted RBP	2.68	□□□□□ -1.98
TCF4-287	ENST00000637500	SYT8	Q8NBV8	401 aa		2.68	□□□□□ -1.98
TCF4-287	ENST00000637500	GPR20	Q99678	358 aa		2.68	□□□□□ -1.98
TCF4-287	ENST00000637500	ADAMTS10	Q9H324	1103 aa		2.68	□□□□□ -1.98
TCF4-287	ENST00000637500	LIN7B	Q9HAP6	207 aa		2.68	□□□□□ -1.98
TCF4-287	ENST00000637500	SLAMF8	Q9P0V8	285 aa		2.68	□□□□□ -1.98
TCF4-287	ENST00000637500	TMEM59L	Q9UK28	342 aa		2.68	□□□□□ -1.98
TCF4-287	ENST00000637500	NOVA2	Q9UNW9	492 aa	Known RBP	2.68	□□□□□ -1.98
TCF4-287	ENST00000637500	PRICKLE3	O43900	615 aa	Predicted RBP	2.67	□□□□□ -1.98
TCF4-287	ENST00000637500	POLR3D	P05423	398 aa	Predicted RBP	2.67	□□□□□ -1.98
TCF4-287	ENST00000637500	PI3	P19957	117 aa		2.67	□□□□□ -1.98
TCF4-287	ENST00000637500	PTPN12	Q05209	780 aa	Known RBP	2.67	□□□□□ -1.98
TCF4-287	ENST00000637500	CDKAL1	Q5VV42	579 aa		2.67	□□□□□ -1.98
TCF4-287	ENST00000637500	KIAA0319	Q5VV43	1072 aa		2.67	□□□□□ -1.98
TCF4-287	ENST00000637500	UBE3D	Q7Z6J8	389 aa		2.67	□□□□□ -1.98
TCF4-287	ENST00000637500	ZNF605	Q86T29	641 aa		2.67	□□□□□ -1.98
TCF4-287	ENST00000637500	PDZD3	Q86UT5	571 aa		2.67	□□□□□ -1.98
TCF4-287	ENST00000637500	GALNT12	Q8IXK2	581 aa		2.67	□□□□□ -1.98
TCF4-287	ENST00000637500	ZC3H12C	Q9C0D7	883 aa	Known RBP	2.67	□□□□□ -1.98
TCF4-287	ENST00000637500	LUC7L	Q9NQ29	371 aa	Known RBP	2.67	□□□□□ -1.98
TCF4-287	ENST00000637500	SRRD	Q9UH36	339 aa		2.67	□□□□□ -1.98
TCF4-287	ENST00000637500	ZMIZ1	Q9ULJ6	1067 aa		2.67	□□□□□ -1.98
TCF4-287	ENST00000637500		H3BS24	57 aa		2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	FSHB	P01225	129 aa		2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	GSTP1	P09211	210 aa	Known RBP	2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	AFF3	P51826	1226 aa	Known RBP	2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	HK2	P52789	917 aa		2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	RING1	Q06587	406 aa		2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	FAAP100	Q0VG06	881 aa		2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	ELOA	Q14241	798 aa	Known RBP	2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	RTP5	Q14D33	572 aa		2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	TIGD5	Q53EQ6	642 aa		2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	NOM1	Q5C9Z4	860 aa	Known RBP	2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	CFAP70	Q5T0N1	1121 aa		2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	ZFYVE27	Q5T4F4	411 aa		2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	SIGLEC10	Q96LC7	697 aa		2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	BDH2	Q9BUT1	245 aa		2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	SLC6A17	Q9H1V8	727 aa		2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	SSU72	Q9NP77	194 aa	Known RBP	2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	PRDM5	Q9NQX1	630 aa	Predicted RBP	2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	CACNA2D2	Q9NY47	1150 aa		2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	SEPT3	Q9UH03	358 aa		2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	POLI	Q9UNA4	740 aa		2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	YBX2	Q9Y2T7	364 aa	Known RBP	2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	CAPN6	Q9Y6Q1	641 aa		2.66	□□□□□ -1.98
TCF4-287	ENST00000637500	C1QTNF3-AMACR	E9PGA6	284 aa		2.65	□□□□□ -1.99
TCF4-287	ENST00000637500	RBAK-RBAKDN	I3L0D1	243 aa		2.65	□□□□□ -1.99
TCF4-287	ENST00000637500	CILP	O75339	1184 aa		2.65	□□□□□ -1.99
TCF4-287	ENST00000637500	SLITRK5	O94991	958 aa		2.65	□□□□□ -1.99
TCF4-287	ENST00000637500	SLPI	P03973	132 aa		2.65	□□□□□ -1.99
TCF4-287	ENST00000637500	EIF1AX	P47813	144 aa	Known RBP	2.65	□□□□□ -1.99
TCF4-287	ENST00000637500	HMGA2	P52926	109 aa		2.65	□□□□□ -1.99
TCF4-287	ENST00000637500	NR0B2	Q15466	257 aa		2.65	□□□□□ -1.99
TCF4-287	ENST00000637500	VMAC	Q2NL98	169 aa		2.65	□□□□□ -1.99
TCF4-287	ENST00000637500	TMEM132E	Q6IEE7	984 aa		2.65	□□□□□ -1.99
TCF4-287	ENST00000637500	SP8	Q8IXZ3	490 aa		2.65	□□□□□ -1.99
TCF4-287	ENST00000637500	MFSD4A	Q8N468	514 aa		2.65	□□□□□ -1.99
TCF4-287	ENST00000637500	TP53I13	Q8NBR0	393 aa	Predicted RBP	2.65	□□□□□ -1.99
TCF4-287	ENST00000637500	TTC16	Q8NEE8	873 aa		2.65	□□□□□ -1.99
TCF4-287	ENST00000637500	UBE2F	Q969M7	185 aa		2.65	□□□□□ -1.99

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms